Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0020265 PREDICTED: uncharacterized protein LOC101306460 [Fragaria vesca subsp. vesca] Chr6 + View
CSS0040824 Late embryogenesis abundant hydroxyproline-rich glycofamily protein, putative [Theobroma cacao] Chr1 + View
CSS0041380 PREDICTED: uncharacterized protein LOC104593459 [Nelumbo nucifera] Chr14 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.2098 chr9 - View
Acer truncatum Atru.chr5.569 chr5 + View
Actinidia chinensis Actinidia10616 Lachesis_group6 - View
Actinidia chinensis Actinidia20167 Lachesis_group6 + View
Actinidia chinensis Actinidia03145 Lachesis_group3 + View
Actinidia chinensis Actinidia31847 Lachesis_group21 + View
Actinidia chinensis Actinidia08599 Lachesis_group6 - View
Actinidia chinensis Actinidia34169 Lachesis_group3 + View
Arabidopsis lyrata AL4G45400 scaffold_4 + View
Avicennia marina MSTRG.27070 ScioBoG_8578_HRSCAF_8617 - View
Avicennia marina MSTRG.4833 ScioBoG_102838_HRSCAF_103081 - View
Avicennia marina MSTRG.8695 ScioBoG_11560_HRSCAF_11609 - View
Avicennia marina MSTRG.70 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.1835 ScioBoG_102834_HRSCAF_103055 - View
Arabidopsis thaliana AT2G46150 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G64065.1)%3B Has 262 Blast hits to 261 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 4%3B Plants - 258%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Capsicum annuum CAN.G532.74 PGAv.1.6.scaffold532 - View
Cannabis sativa CANSAT21G2155 NC_044374.1 + View
Corylus avellana Haze_00073 Similar to At1g64065: Late embryogenesis abundant protein At1g64065 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_15570 Similar to At1g64065: Late embryogenesis abundant protein At1g64065 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_08736 Similar to At1g64065: Late embryogenesis abundant protein At1g64065 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g15370 Putative Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family chr8 + View
Citrus clementina Ciclev10023484m.g scaffold_3 - View
Citrus clementina Ciclev10024039m.g scaffold_3 - View
Carpinus fangiana Cfa016319 Cfa06 + View
Carpinus fangiana Cfa003865 Cfa01 - View
Cardamine hirsuta CARHR141430 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr4 + View
Carya illinoinensis CiPaw.11G128100 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr11 - View
Carya illinoinensis CiPaw.12G087900 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr12 - View
Carya illinoinensis CiPaw.06G005300 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr06 + View
Carya illinoinensis CiPaw.05G260600 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr05 - View
Carya illinoinensis CiPaw.02G035800 PTHR31852:SF6 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr02 + View
Citrullus lanatus ClCG01G002260 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family LENGTH=221 CG_Chr01 - View
Carica papaya Cpa.g.sc122.1 supercontig_122 + View
Capsella rubella Carub.0004s2883 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_4 + View
Cucumis sativus L. CsaV3_5G002330 Late embryogenesis abundant protein chr5 - View
Daucus carota DCAR_020284 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv28366 GWHABJS00000004 - View
Davidia involucrata Dinv37580 GWHABJS00000017 - View
Davidia involucrata Dinv32525 GWHABJS00000020 + View
Davidia involucrata Dinv35285 GWHABJS00000009 - View
Durio zibethinus Duzib084G0687 NW_019167827.1 - View
Durio zibethinus Duzib084G0188 NW_019167827.1 + View
Durio zibethinus Duzib205G1643 NW_019168381.1 + View
Durio zibethinus Duzib205G0667 NW_019168381.1 + View
Durio zibethinus Duzib138G1387 NW_019167893.1 + View
Erigeron canadensis ECA240G4088 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA238G0075 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.A02687 Chr01 - View
Eucalyptus grandis Eucgr.D01803 Chr04 - View
Erythranthe guttata Migut.F00267 scaffold_6 - View
Erythranthe guttata Migut.E01213 scaffold_5 + View
Fragaria x ananassa FAN13G3082 PTHR11005//PTHR11005:SF41 - LYSOSOMAL ACID LIPASE-RELATED // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria x ananassa FAN06G4007 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-2 + View
Fragaria x ananassa FAN08G2247 PTHR11005//PTHR11005:SF41 - LYSOSOMAL ACID LIPASE-RELATED // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN01G0320 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-4 - View
Fragaria x ananassa FAN13G1848 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb5-2 + View
Fragaria x ananassa FAN06G3503 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-2 + View
Fragaria x ananassa FAN04G0623 PTHR11005//PTHR11005:SF41 - LYSOSOMAL ACID LIPASE-RELATED // SUBFAMILY NOT NAMED Fvb5-4 - View
Fragaria vesca FvH4_7g15480 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7 + View
Fragaria vesca FvH4_7g30550 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7 + View
Gossypium hirsutum Gohir.D12G255350 PF03168 - Late embryogenesis abundant protein (LEA_2) D12 - View
Gossypium hirsutum Gohir.A12G252700 PF03168 - Late embryogenesis abundant protein (LEA_2) A12 - View
Gossypium hirsutum Gohir.D08G134000 PF03168 - Late embryogenesis abundant protein (LEA_2) D08 - View
Glycine max Glyma.05G212600 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm05 + View
Glycine max Glyma.01G222800 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm01 + View
Glycine max Glyma.11G020500 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm11 - View
Glycine max Glyma.08G019000 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm08 + View
Gossypium raimondii Gorai.008G273100 Chr08 - View
Gossypium raimondii Gorai.006G197900 Chr06 - View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126550 Hma1.2p1_0327F.1 + View
Hydrangea macrophylla Hma1.2p1_0142F.1_g064460 Hma1.2p1_0142F.1 - View
Lonicera japonica Lj3A916T21 GWHAAZE00000003 - View
Lonicera japonica Lj1P1008T31 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_2_133420 PF03168 - Late embryogenesis abundant protein (LEA_2) Lsat_1_v8_lg_2 + View
Malus domestica MD01G1210900 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr01 + View
Malus domestica MD07G1281400 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr07 + View
Malus domestica MD14G1113800 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr14 + View
Malus domestica MD06G1091500 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr06 - View
Manihot esculenta Manes.06G154100 Chromosome06 + View
Manihot esculenta Manes.05G028600 Chromosome05 - View
Medicago truncatula Medtr5g009910 late embryogenesis abundant protein chr5 - View
Medicago truncatula Medtr6g033965 triacylglycerol lipase-like protein chr6 + View
Nelumbo nucifera Nn1g01706 chr1 - View
Olea europaea Oeu061669.1 chr1 - View
Olea europaea Oeu037138.1 chr11 - View
Olea europaea Oeu009292.1 scaffold1346 - View
Olea europaea Oeu003332.1 chr12 + View
Petunia axillaris Peaxi162Scf00074g01629 Late embryogenesis abundant hydroxyproline-rich glycofamily protein, putative Peaxi162Scf00074 - View
Punica granatum PGR042G3547 NC_045130.1 + View
Prunus persica Prupe.2G303200 PF03168 - Late embryogenesis abundant protein (LEA_2) Pp02 + View
Prunus persica Prupe.5G107500 Pp05 + View
Prunus persica Prupe.2G178400 PF03168 - Late embryogenesis abundant protein (LEA_2) Pp02 + View
Pisum sativum Psat2g184000 Late embryogenesis abundant protein chr2LG1 + View
Papaver somniferum PSO384G4935 NC_039368.1 - View
Populus trichocarpa Potri.003G133350 Chr03 + View
Populus trichocarpa Potri.014G090900 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr14 + View
Phaseolus vulgaris Phvul.002G293800 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr02 + View
Phaseolus vulgaris Phvul.002G160800 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr02 + View
Quercus lobata QL09p012150 9 - View
Rhododendron simsii Rhsim02G0236400 chr02 + View
Striga asiatica SGA_v2.0_scaffold192G40613 scaffold192 - View
Striga asiatica SGA_v2.0_scaffold173G39128 scaffold173 - View
Striga asiatica SGA_v2.0_scaffold11G05685 scaffold11 + View
Salvia bowleyana SalBow4G2709 GWHASIU00000008 - View
Salvia bowleyana SalBow2G1146 GWHASIU00000007 - View
Salix brachista Sabra01G0073400 GWHAAZH00000001 - View
Salix brachista Sabra03G0095700 GWHAAZH00000003 + View
Salix brachista Sabra14G0065900 GWHAAZH00000014 + View
Simmondsia chinensis Sc01g0009930 GWHAASQ00000001 + View
Solanum lycopersicum Solyc08g081700.1 late embryogenesis abundant protein At1g64065-like (AHRD V3.3 *** A0A2I4FBP0_9ROSI) SL4.0ch08 + View
Schrenkiella parvula Sp4g28210 PTHR31852:SF6 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN ch4-6 + View
Solanum pennellii Sopen01g038960 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Spenn-ch01 + View
Solanum pennellii Sopen08g029990 hypothetical protein Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400020886 Conserved gene of unknown function ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400012315 Conserved gene of unknown function ST4.03ch08 + View
Trochodendron aralioides TAR629G1475 group0 + View
Trochodendron aralioides TAR375G0775 group15 + View
Trochodendron aralioides TAR636G1394 group1 - View
Theobroma cacao Thecc.03G187100 Late embryogenesis abundant hydroxyproline-rich glycofamily protein Chromosome_3 + View
Theobroma cacao Thecc.01G351700 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chromosome_1 - View
Theobroma cacao Thecc.03G287600 Late embryogenesis abundant hydroxyproline-rich glycofamily protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104809652 late embryogenesis abundant protein At1g64065 NW_010965019.1 - View
Tarenaya hassleriana THA.LOC104817758 late embryogenesis abundant protein At1g64065-like NW_010960187.1 - View
Vaccinium macrocarpon vmacro10087 Similar to At1g64065: Late embryogenesis abundant protein At1g64065 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G2003 CM024069.1 + View
Vigna mungo VMungo1215G3100 CM024074.1 - View
Vitis vinifera GSVIVG01028798001 chr16 + View