Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0048032 PREDICTED: pentatricopeptide repeat-containing protein At3g06920 [Nicotiana sylvestris] Contig1125 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.2848 chr4 - View
Actinidia chinensis Actinidia40273 Lachesis_group22 - View
Arabidopsis lyrata AL3G18040 scaffold_3 + View
Avicennia marina MSTRG.10097 ScioBoG_12795_HRSCAF_12848 - View
Arabidopsis thaliana AT3G06920 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: fruit%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1)%3B Has 81615 Blast hits to 15733 proteins in 342 species: Archae - 9%3B Bacteria - 150%3B Metazoa - 1130%3B Fungi - 1463%3B Plants - 75788%3B Viruses - 0%3B Other Eukaryotes - 3075 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0796G196 AmTr_v1.0_scaffold00045 - View
Brassica napus A03p34960 A03 + View
Brassica napus C03p42540 C03 + View
Brassica oleracea BolC3t16524H C3 + View
Brassica rapa BraA03t12676Z A03 + View
Cannabis sativa CANSAT78G1021 NC_044376.1 + View
Corylus avellana Haze_01195 Similar to At3g06920: Pentatricopeptide repeat-containing protein At3g06920 (Arabidopsis thaliana OX%3D3702) 1 + View
Citrus clementina Ciclev10007037m.g scaffold_9 + View
Ceratophyllum demersum CDE11G0294 9 - View
Carpinus fangiana Cfa015391 Cfa06 - View
Cardamine hirsuta CARHR081530 Pentatricopeptide repeat-containing protein Chr3 + View
Carya illinoinensis CiPaw.01G148200 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr01 + View
Corchorus olitorius COL.COLO4_13863 hypothetical protein AWUE01015333.1 + View
Capsella rubella Carub.0003s0644 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) scaffold_3 + View
Cucumis sativus L. CsaV3_3G014680 Pentatricopeptide repeat-containing protein chr3 - View
Durio zibethinus Duzib151G0724 NW_019167904.1 - View
Erythranthe guttata Migut.G00155 scaffold_7 + View
Eutrema salsugineum Thhalv10020026m.g PF12854//PF13041//PF13812 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_13 - View
Fragaria x ananassa FAN12G2558 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb4-3 - View
Fragaria x ananassa FAN17G0573 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb4-2 - View
Fragaria x ananassa FAN12G4333 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb4-3 + View
Fragaria vesca FvH4_4g18230 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb4 - View
Gossypium hirsutum Gohir.D09G239500 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) D09 + View
Manihot esculenta Manes.03G195800 Chromosome03 - View
Olea europaea Oeu029705.1 scaffold2475 - View
Punica granatum PGR031G3585 NC_045127.1 - View
Prunus persica Prupe.1G135500 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Pp01 + View
Populus trichocarpa Potri.010G014100 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr10 + View
Quercus lobata QL06p009008 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0422371 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0222900 chr04 - View
Striga asiatica SGA_v2.0_scaffold67G22630 scaffold67 + View
Salix brachista Sabra10G0009000 GWHAAZH00000010 + View
Sechium edule Sed0000576 LG02 + View
Sechium edule Sed0021384 LG12 - View
Sapria himalayana SHI00269 scaffold1_25991295 + View
Schrenkiella parvula Sp3g05870 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) ch3-1 + View
Trochodendron aralioides TAR365G0845 group16 - View
Theobroma cacao Thecc.04G285300 Pentatricopeptide repeat-containing protein Chromosome_4 - View
Tripterygium wilfordii TWI09G0560 NC_052245.1 - View
Vaccinium macrocarpon vmacro08158 Similar to At3g06920: Pentatricopeptide repeat-containing protein At3g06920 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View