Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009885 PREDICTED: QWRF motif-containing protein 2 isoform X1 [Vitis vinifera] Chr9 - View
CSS0009467 unnamed protein product [Coffea canephora] Contig852 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G6320 LG-8 + View
Aethionema arabicum Aa31LG10G4200 LG-10 - View
Acer truncatum Atru.chr5.2382 chr5 - View
Acer truncatum Atru.chr13.814 chr13 + View
Actinidia chinensis Actinidia04379 Lachesis_group7 - View
Actinidia chinensis Actinidia00383 Lachesis_group12 + View
Actinidia chinensis Actinidia22684 Lachesis_group28 + View
Actinidia chinensis Actinidia27985 Lachesis_group16 - View
Arabidopsis lyrata AL1G57430 scaffold_1 + View
Arabidopsis lyrata AL3G33000 scaffold_3 + View
Avicennia marina MSTRG.1029 ScioBoG_102833_HRSCAF_103052 - View
Avicennia marina MSTRG.16688 ScioBoG_19743_HRSCAF_19834 - View
Avicennia marina MSTRG.27754 ScioBoG_94932_HRSCAF_95134 + View
Avicennia marina MSTRG.5326 ScioBoG_102838_HRSCAF_103081 - View
Amaranthus hybridus Ah.14g085540 QWRF motif-containing protein 2 AmaHy_arrow1_Scaffold_14 + View
Aquilegia oxysepala Aqoxy5G00894 CHR05 - View
Aquilegia oxysepala Aqoxy6G02703 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R3A1DK PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VBT28R PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT3G19570 SNOWY COTYLEDON protein (DUF566) Encodes SCO3 (snowy cotyledon3)%2C a member of a largely uncharacterized protein family unique to the plant kingdom. The sco3-1 mutation alters chloroplast morphology and development%2C reduces chlorophyll accumulation%2C impairs thylakoid formation and photosynthesis in seedlings%2C and results in photoinhibition under extreme CO(2) concentrations in mature leaves. SCO3 is targeted to the periphery of peroxisomes. Family of unknown function (DUF566) %3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573)%3B BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT1G49890.1)%3B Has 4891 Blast hits to 1814 proteins in 299 species: Archae - 6%3B Bacteria - 1296%3B Metazoa - 1110%3B Fungi - 663%3B Plants - 249%3B Viruses - 59%3B Other Eukaryotes - 1508 (source: NCBI BLink). Family of unknown function (DUF566) %3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573)%3B BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT1G49890.1)%3B Has 4892 Blast hits to 1821 proteins in 299 species: Archae - 6%3B Bacteria - 1294%3B Metazoa - 1107%3B Fungi - 667%3B Plants - 251%3B Viruses - 59%3B Other Eukaryotes - 1508 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G49890 QWRF motif protein (DUF566) Family of unknown function (DUF566) %3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573)%3B BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G19570.2)%3B Has 9198 Blast hits to 4153 proteins in 422 species: Archae - 34%3B Bacteria - 1349%3B Metazoa - 2630%3B Fungi - 1436%3B Plants - 341%3B Viruses - 197%3B Other Eukaryotes - 3211 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC09g48922 ChrC09 + View
Brassica napus A08p03490 A08 - View
Brassica napus C01p44540 C01 - View
Brassica oleracea BolC1t04420H C1 - View
Beta vulgaris EL10Ac8g19367 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Chr8_EL10_PGA_scaffold4 + View
Capsicum annuum CAN.G606.48 PGAv.1.6.scaffold606 + View
Cannabis sativa CANSAT25G2917 NC_044370.1 - View
Cicer arietinum L. Ca_13234_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_11042_v3 Ca_LG4_v3 - View
Corylus avellana Haze_10239 Similar to SCO3: Protein SNOWY COTYLEDON 3 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc02_g19710 Family of unknown function (DUF566)  chr2 + View
Coffea canephora Cc10_g05630 Putative Family of unknown function (DUF566)  chr10 + View
Citrus clementina Ciclev10000532m.g scaffold_5 + View
Citrus clementina Ciclev10028034m.g scaffold_8 - View
Ceratophyllum demersum CDE07G1263 5 + View
Ceratophyllum demersum CDE04G1052 2 - View
Ceratophyllum demersum CDE04G0032 2 - View
Carpinus fangiana Cfa004641 Cfa02 - View
Cardamine hirsuta CARHR095020 Family of unknown function (DUF566) Chr3 + View
Carya illinoinensis CiPaw.07G176500 PTHR31807//PTHR31807:SF8 - FAMILY NOT NAMED // QWRF MOTIF-CONTAINING PROTEIN 9 Chr07 - View
Carya illinoinensis CiPaw.06G166700 PTHR31807//PTHR31807:SF4 - FAMILY NOT NAMED // PROTEIN SNOWY COTYLEDON 3-RELATED Chr06 - View
Carya illinoinensis CiPaw.05G016300 PTHR31807//PTHR31807:SF4 - FAMILY NOT NAMED // PROTEIN SNOWY COTYLEDON 3-RELATED Chr05 + View
Citrullus lanatus ClCG05G020500 Family of unknown function (DUF566) LENGTH=644 CG_Chr05 + View
Citrullus lanatus ClCG08G016390 Family of unknown function (DUF566) LENGTH=659 CG_Chr08 + View
Citrullus lanatus ClCG02G006740 Family of unknown function (DUF566) LENGTH=659 CG_Chr02 + View
Cucumis melo MELO3C016807.2 Protein SNOWY COTYLEDON 3 chr07 - View
Cucumis melo MELO3C018513.2 Protein SNOWY COTYLEDON 3 chr01 + View
Cucumis melo MELO3C010814.2 QWRF motif-containing protein 3 chr03 + View
Corchorus olitorius COL.COLO4_32535 hypothetical protein AWUE01021129.1 - View
Carica papaya Cpa.g.sc21.101 supercontig_21 - View
Carica papaya Cpa.g.sc106.71 supercontig_106 - View
Capsella rubella Carub.0003s1941 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_4G034920 QWRF motif-containing protein 2-like chr4 + View
Cucumis sativus L. CsaV3_2G026220 QWRF motif-containing protein 2 chr2 - View
Cucumis sativus L. CsaV3_7G007900 QWRF motif-containing protein 2 chr7 - View
Daucus carota DCAR_029116 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_001683 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv44969 GWHABJS00000002 - View
Davidia involucrata Dinv42224 GWHABJS00000002 - View
Davidia involucrata Dinv15796 GWHABJS00000005 + View
Durio zibethinus Duzib248G0267 NW_019168048.1 - View
Durio zibethinus Duzib116G0728 NW_019167949.1 + View
Durio zibethinus Duzib052G0495 NW_019167849.1 - View
Durio zibethinus Duzib093G1400 NW_019167937.1 - View
Erigeron canadensis ECA240G0909 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA236G1541 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.G01262 Chr07 - View
Eucalyptus grandis Eucgr.I01075 Chr09 - View
Eucalyptus grandis Eucgr.F02263 Chr06 + View
Erythranthe guttata Migut.B00431 scaffold_2 + View
Erythranthe guttata Migut.C00494 scaffold_3 - View
Eutrema salsugineum Thhalv10011296m.g PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED scaffold_7 - View
Eutrema salsugineum Thhalv10020236m.g PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED scaffold_13 - View
Fragaria x ananassa FAN20G1023 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Fvb2-3 + View
Fragaria x ananassa FAN20G0074 PTHR31807//PTHR31807:SF4 - FAMILY NOT NAMED // PROTEIN SNOWY COTYLEDON 3-RELATED Fvb2-3 - View
Fragaria x ananassa FAN15G3605 PTHR31807//PTHR31807:SF8 - FAMILY NOT NAMED // QWRF MOTIF-CONTAINING PROTEIN 9 Fvb2-4 - View
Fragaria x ananassa FAN27G3164 PTHR31807//PTHR31807:SF4 - FAMILY NOT NAMED // PROTEIN SNOWY COTYLEDON 3-RELATED Fvb2-1 + View
Fragaria x ananassa FAN15G3708 PTHR31807//PTHR31807:SF4 - FAMILY NOT NAMED // PROTEIN SNOWY COTYLEDON 3-RELATED Fvb2-4 + View
Fragaria x ananassa FAN24G0570 PTHR31807//PTHR31807:SF8 - FAMILY NOT NAMED // QWRF MOTIF-CONTAINING PROTEIN 9 Fvb2-2 + View
Fragaria x ananassa FAN27G0288 PTHR31807//PTHR31807:SF8 - FAMILY NOT NAMED // QWRF MOTIF-CONTAINING PROTEIN 9 Fvb2-1 - View
Fragaria x ananassa FAN24G3455 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Fvb2-2 + View
Fragaria vesca FvH4_2g04080 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Fvb2 + View
Fragaria vesca FvH4_2g33270 PTHR31807//PTHR31807:SF8 - FAMILY NOT NAMED // QWRF MOTIF-CONTAINING PROTEIN 9 Fvb2 - View
Gossypium hirsutum Gohir.D02G203000 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED D02 - View
Gossypium hirsutum Gohir.A06G023300 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 A06 + View
Gossypium hirsutum Gohir.D02G089066 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 D02 - View
Gossypium hirsutum Gohir.A13G045900 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED A13 + View
Gossypium hirsutum Gohir.D06G020500 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 D06 + View
Gossypium hirsutum Gohir.D13G045000 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED D13 + View
Gossypium hirsutum Gohir.D05G212000 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 D05 + View
Gossypium hirsutum Gohir.A05G208600 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 A05 + View
Gossypium hirsutum Gohir.A03G183700 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED A03 - View
Gossypium hirsutum Gohir.A02G081400 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 A02 - View
Glycine max Glyma.06G045300 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Gm06 + View
Glycine max Glyma.17G236400 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Gm17 - View
Glycine max Glyma.14G087900 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Gm14 + View
Glycine max Glyma.10G258400 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Gm10 - View
Glycine max Glyma.20G132700 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Gm20 + View
Gossypium raimondii Gorai.010G025000 Chr10 + View
Gossypium raimondii Gorai.005G232600 Chr05 - View
Gossypium raimondii Gorai.005G099700 Chr05 - View
Gossypium raimondii Gorai.009G218600 Chr09 + View
Gossypium raimondii Gorai.013G049800 Chr13 + View
Helianthus annuus HanXRQChr03g0069951 Probable family of unknown function (DUF566) HanXRQChr03 - View
Helianthus annuus HanXRQChr04g0128581 Putative QWRF family HanXRQChr04 + View
Helianthus annuus HanXRQChr09g0266591 Putative QWRF family HanXRQChr09 + View
Hydrangea macrophylla Hma1.2p1_1023F.1_g248870 Hma1.2p1_1023F.1 - View
Hydrangea macrophylla Hma1.2p1_1773F.1_g301690 Hma1.2p1_1773F.1 + View
Lupinus albus Lalb_Chr21g0308131 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Lalb_Chr21 - View
Lupinus albus Lalb_Chr02g0145071 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Lalb_Chr02 - View
Lupinus albus Lalb_Chr06g0165231 PTHR31807//PTHR31807:SF4 - FAMILY NOT NAMED // PROTEIN SNOWY COTYLEDON 3-RELATED Lalb_Chr06 - View
Lotus japonicus Lj5g0009394 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 chr5 - View
Lotus japonicus Lj5g0014577 PTHR31807//PTHR31807:SF4 - FAMILY NOT NAMED // PROTEIN SNOWY COTYLEDON 3-RELATED chr5 + View
Lonicera japonica Lj4C69T11 GWHAAZE00000004 + View
Lonicera japonica Lj5A217T97 GWHAAZE00000005 + View
Lonicera japonica Lj9A326T75 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_7_85601 Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_9_112361 Lsat_1_v8_lg_9 + View
Magnolia biondii MBI16_g02951_MAGBIO AED:0.29 Chr16 - View
Malus domestica MD10G1103300 Family of unknown function (DUF566) Chr10 + View
Malus domestica MD08G1086900 Family of unknown function (DUF566) Chr08 - View
Malus domestica MD15G1071600 Family of unknown function (DUF566) Chr15 - View
Malus domestica MD05G1097600 Family of unknown function (DUF566) Chr05 + View
Manihot esculenta Manes.10G080600 Chromosome10 + View
Manihot esculenta Manes.07G062300 Chromosome07 - View
Manihot esculenta Manes.18G045100 Chromosome18 + View
Manihot esculenta Manes.05G180700 Chromosome05 + View
Medicago truncatula Medtr1g106735 DUF566 family protein chr1 - View
Medicago truncatula Medtr1g018440 DUF566 family protein chr1 - View
Nelumbo nucifera Nn1g04601 chr1 - View
Nelumbo nucifera Nn5g30541 chr5 + View
Nicotiana tabacum Nitab4.5_0001105g0160 Protein of unknown function DUF566 Nitab4.5_0001105 - View
Olea europaea Oeu021367.1 chr11 - View
Olea europaea Oeu037269.1 chr5 + View
Olea europaea Oeu011143.1 scaffold1422 - View
Olea europaea Oeu013776.1 chr15 + View
Petunia axillaris Peaxi162Scf00081g00148 Family of unknown function (DUF566) Peaxi162Scf00081 + View
Petunia axillaris Peaxi162Scf00016g02743 Family of unknown function (DUF566) Peaxi162Scf00016 + View
Punica granatum PGR042G3584 NC_045130.1 - View
Prunus persica Prupe.8G142000 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Pp08 + View
Pisum sativum Psat6g215560 Family of unknown function (DUF566) chr6LG2 - View
Papaver somniferum PSO170G4859 NC_039360.1 + View
Populus trichocarpa Potri.014G017500 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Chr14 - View
Populus trichocarpa Potri.001G295800 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Chr01 - View
Populus trichocarpa Potri.009G089800 PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Chr09 - View
Populus trichocarpa Potri.002G119500 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Chr02 - View
Phaseolus vulgaris Phvul.009G070600 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Chr09 + View
Phaseolus vulgaris Phvul.007G043900 Chr07 + View
Phaseolus vulgaris Phvul.001G026600 PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Chr01 + View
Quercus lobata QL11p031552 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0309371 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr6g0253431 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim05G0090200 chr05 + View
Rhododendron simsii Rhsim06G0060900 chr06 + View
Striga asiatica SGA_v2.0_scaffold32G13009 scaffold32 - View
Salvia bowleyana SalBow6G1327 GWHASIU00000002 + View
Salvia bowleyana SalBow7G3242 GWHASIU00000005 + View
Salvia bowleyana SalBow3G3991 GWHASIU00000006 + View
Salix brachista Sabra16G0184900 GWHAAZH00000016 - View
Salix brachista Sabra09G0069600 GWHAAZH00000009 - View
Salix brachista Sabra02G0094100 GWHAAZH00000002 - View
Salix brachista Sabra14G0011400 GWHAAZH00000014 - View
Simmondsia chinensis Sc14g0002540 GWHAASQ00000014 - View
Simmondsia chinensis Sc02g0007810 GWHAASQ00000002 + View
Sechium edule Sed0019586 LG10 - View
Sechium edule Sed0000800 LG05 + View
Solanum lycopersicum Solyc04g078000.3 QWRF motif-containing protein 2-like (AHRD V3.3 *** A0A2I4H6P0_9ROSI) SL4.0ch04 - View
Solanum lycopersicum Solyc01g107200.4 QWRF motif-containing protein 2 (AHRD V3.3 *** A0A2G2Y2D4_CAPAN) SL4.0ch01 - View
Solanum pennellii Sopen04g031600 Family of unknown function (DUF566) | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 | BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) Spenn-ch04 - View
Solanum pennellii Sopen01g049460 Family of unknown function (DUF566) | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 | BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400021528 Conserved gene of unknown function ST4.03ch04 - View
Selenicereus undatus Hund12604 Scaffold_33679 - View
Trochodendron aralioides TAR381G0627 group11 + View
Trochodendron aralioides TAR628G0131 group5 - View
Trochodendron aralioides TAR376G0410 group14 - View
Trochodendron aralioides TAR625G0105 group4 + View
Theobroma cacao Thecc.02G115000 Family of Uncharacterized protein function (DUF566) Chromosome_2 + View
Theobroma cacao Thecc.08G090900 Family of Uncharacterized protein function Chromosome_8 - View
Trifolium pratense TPR.G3773 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI14G0453 NC_052249.1 - View
Tripterygium wilfordii TWI59G0104 NC_052248.1 - View
Vaccinium macrocarpon vmacro21446 Similar to SCO3: Protein SNOWY COTYLEDON 3 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G2410 CM024072.1 - View
Vigna mungo VMungo0647G1708 CM024073.1 + View
Vigna mungo VMungo0720G0960 CM024071.1 - View
Vanilla planifolia HPP92_007755 Family of unknown function (DUF566) *-* CM028152.1 + View
Vitis vinifera GSVIVG01009361001 chr18 - View
Vitis vinifera GSVIVG01037854001 chr3 + View