Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028078 PREDICTED: pentatricopeptide repeat-containing protein At3g58590 [Vitis vinifera] Chr6 - View
CSS0004860 PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Vitis vinifera] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G8240 LG-7 + View
Aethionema arabicum Aa31LG4G11520 LG-4 - View
Acer truncatum Atru.chr11.1692 chr11 + View
Actinidia chinensis Actinidia31949 Lachesis_group15 - View
Arabidopsis lyrata AL2G28460 scaffold_2 + View
Arabidopsis lyrata AL5G13090 scaffold_5 + View
Amaranthus hybridus Ah.03g139200 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial AmaHy_arrow1_Scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NWYI6Z PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT2G03380 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1)%3B Has 46134 Blast hits to 13811 proteins in 252 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 175%3B Fungi - 164%3B Plants - 45093%3B Viruses - 0%3B Other Eukaryotes - 693 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G69350 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 50942 Blast hits to 14152 proteins in 270 species: Archae - 0%3B Bacteria - 36%3B Metazoa - 125%3B Fungi - 175%3B Plants - 49809%3B Viruses - 0%3B Other Eukaryotes - 797 (source: NCBI BLink). Chr1 + View
Brassica napus C06p40570 C06 - View
Brassica napus C07p19650 C07 - View
Capsicum annuum CAN.G1340.14 PGAv.1.6.scaffold1340 + View
Cicer arietinum L. Ca_06770_v3 Ca_LG3_v3 - View
Corylus avellana Haze_11935 Similar to PCMP-E66: Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial (Arabidopsis thaliana OX%3D3702) 9 + View
Citrus clementina Ciclev10033606m.g scaffold_4 + View
Carpinus fangiana Cfa008909 Cfa03 + View
Cardamine hirsuta CARHR145740 Pentatricopeptide repeat-containing protein Chr5 + View
Carya illinoinensis CiPaw.05G128100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr05 - View
Carya illinoinensis CiPaw.06G090000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr06 - View
Corchorus olitorius COL.COLO4_27937 hypothetical protein AWUE01019716.1 - View
Carica papaya Cpa.g.sc1.84 supercontig_1 + View
Chenopodium quinoa AUR62007957 PCMP-E47: Pentatricopeptide repeat-containing protein At2g03380, mitochondrial C_Quinoa_Scaffold_2646 + View
Capsella rubella Carub.0005s0235 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_5 + View
Capsella rubella Carub.0002s1595 PF13041 - PPR repeat family (PPR_2) scaffold_2 + View
Daucus carota DCAR_027448 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv16704 GWHABJS00000018 + View
Davidia involucrata Dinv34113 GWHABJS00000008 - View
Davidia involucrata Dinv38764 GWHABJS00000019 - View
Durio zibethinus Duzib052G0304 NW_019167849.1 - View
Erigeron canadensis ECA233G0590 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA234G1475 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.B03180 Chr02 - View
Eutrema salsugineum Thhalv10005367m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_6 - View
Eutrema salsugineum Thhalv10019580m.g PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_9 - View
Fragaria x ananassa FAN09G4846 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb6-2 - View
Fragaria x ananassa FAN12G3073 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb4-3 + View
Fragaria x ananassa FAN17G1081 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb4-2 + View
Gossypium hirsutum Gohir.A12G162700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A12 + View
Gossypium hirsutum Gohir.D12G165700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D12 + View
Gossypium hirsutum Gohir.D02G127700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D02 + View
Gossypium hirsutum Gohir.A03G102700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A03 + View
Gossypium hirsutum Gohir.A12G178800 PF01535 - PPR repeat (PPR) A12 - View
Glycine max Glyma.02G113400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm02 - View
Glycine max Glyma.01G054900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm01 - View
Glycine max Glyma.07G226200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm07 + View
Gossypium raimondii Gorai.008G178400 Chr08 + View
Gossypium raimondii Gorai.005G143300 Chr05 + View
Helianthus annuus HanXRQChr08g0210941 Probable ribonuclease 1 HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0357F.1_g134400 Hma1.2p1_0357F.1 + View
Lotus japonicus Lj2g0018360 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr2 - View
Lonicera japonica Lj6P782T38 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_8_48141 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_8 + View
Magnolia biondii MBI18_g24467_MAGBIO AED:0.31 Chr18 + View
Medicago truncatula Medtr4g082470 PPR containing plant-like protein chr4 + View
Medicago truncatula Medtr5g043450 PPR containing plant-like protein chr5 - View
Medicago truncatula Medtr7g011840 PPR containing plant-like protein chr7 + View
Nelumbo nucifera Nn4g23315 chr4 + View
Olea europaea Oeu016230.1 chr6 + View
Petunia axillaris Peaxi162Scf00026g10312 Pentatricopeptide repeat-containing protein Peaxi162Scf00026 + View
Punica granatum PGR102G0545 NC_045129.1 + View
Prunus persica Prupe.1G281800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp01 + View
Pisum sativum Psat1g022040 PPR repeat family chr1LG6 + View
Pisum sativum Psat2g127800 Pentatricopeptide repeat chr2LG1 + View
Populus trichocarpa Potri.008G092900 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr08 + View
Populus trichocarpa Potri.010G161800 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr10 - View
Phaseolus vulgaris Phvul.002G167800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 + View
Phaseolus vulgaris Phvul.002G089500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 + View
Quercus lobata QL12p018923 12 + View
Rhododendron simsii Rhsim12G0076800 chr12 + View
Striga asiatica SGA_v2.0_scaffold16G07750 scaffold16 + View
Salvia bowleyana SalBow2G3140 GWHASIU00000007 + View
Solanum lycopersicum Solyc05g012630.2 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PRA0_9MAGN) SL4.0ch05 + View
Solanum pennellii Sopen05g007460 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG402028329 Pentatricopeptide repeat-containing protein ST4.03ch05 - View
Trochodendron aralioides TAR374G0394 group12 + View
Trifolium pratense TPR.G34047 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI75G1542 NC_052253.1 - View
Vigna mungo VMungo1215G1316 CM024074.1 - View