Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0050490 PREDICTED: uncharacterized protein LOC104589948 [Nelumbo nucifera] Contig40 - View
CSS0048467 PREDICTED: uncharacterized protein LOC104589948 [Nelumbo nucifera] Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr12.1062 chr12 + View
Avicennia marina MSTRG.19366 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.9037 ScioBoG_11560_HRSCAF_11609 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0S1UWQ PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT3G52490 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101%2C a ClpB chaperonin required for thermotolerance. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein%3B INVOLVED IN: protein metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Clp%2C N-terminal (InterPro:IPR004176)%3B BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1)%3B Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25%3B Bacteria - 6450%3B Metazoa - 2%3B Fungi - 186%3B Plants - 346%3B Viruses - 0%3B Other Eukaryotes - 659 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0772G208 AmTr_v1.0_scaffold00030 - View
Brassica carinata BcaC02g07642 ChrC02 + View
Brassica napus C04p65040 C04 - View
Brassica oleracea BolC4t27982H C4 - View
Beta vulgaris EL10Ac4g08705 PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Chr4_EL10_PGA_scaffold1 + View
Capsicum annuum CAN.G143.16 PGAv.1.6.scaffold143 + View
Cannabis sativa CANSAT56G3554 NC_044371.1 - View
Corylus avellana Haze_03471 Similar to SMXL3: Protein SMAX1-LIKE 3 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc06_g06420 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein chr6 + View
Coffea canephora Cc02_g09480 Putative Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein chr2 - View
Citrus clementina Ciclev10014322m.g scaffold_2 + View
Ceratophyllum demersum CDE08G0693 6 + View
Carpinus fangiana Cfa010535 Cfa04 - View
Cardamine hirsuta CARHR130240 ATP-dependent Clp protease Chr4 - View
Carya illinoinensis CiPaw.10G016100 PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Chr10 + View
Carya illinoinensis CiPaw.14G034500 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Chr14 + View
Carya illinoinensis CiPaw.13G043000 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Chr13 + View
Citrullus lanatus ClCG08G008410 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein LENGTH=815 CG_Chr08 + View
Citrullus lanatus ClCG10G018460 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein LENGTH=815 CG_Chr10 - View
Cucumis melo MELO3C009523.2 protein SMAX1-LIKE 3 chr04 - View
Cucumis melo MELO3C019911.2 protein SMAX1-LIKE 3-like chr03 - View
Chenopodium quinoa AUR62034178 CLPB1: Chaperone protein ClpB1 C_Quinoa_Scaffold_2123 - View
Capsella rubella Carub.0004s1773 KOG1051 - Chaperone HSP104 and related ATP-dependent Clp proteases scaffold_4 - View
Capsella rubella Carub.0005s1888 PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED scaffold_5 - View
Cucumis sativus L. CsaV3_6G004390 protein SMAX1-LIKE 3-like chr6 + View
Davidia involucrata Dinv12332 GWHABJS00000021 - View
Davidia involucrata Dinv08593 GWHABJS00000004 - View
Davidia involucrata Dinv08411 GWHABJS00000009 + View
Erigeron canadensis ECA232G3486 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.J00278 Chr10 + View
Erythranthe guttata Migut.F00857 scaffold_6 - View
Eutrema salsugineum Thhalv10016500m.g KOG1051 - Chaperone HSP104 and related ATP-dependent Clp proteases scaffold_10 - View
Gossypium hirsutum Gohir.D09G131800 PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED D09 - View
Gossypium hirsutum Gohir.A09G135200 PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED A09 - View
Glycine max Glyma.20G193900 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Gm20 + View
Glycine max Glyma.10G121542 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Gm10 - View
Glycine max Glyma.10G196300 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Gm10 - View
Glycine max Glyma.20G073000 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Gm20 - View
Gossypium raimondii Gorai.006G150400 Chr06 - View
Lotus japonicus Lj5g0003766 PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED chr5 - View
Lotus japonicus Lj5g0024118 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED chr5 + View
Lonicera japonica Lj3A924T49 GWHAAZE00000003 - View
Lonicera japonica Lj1A1049T25 GWHAAZE00000001 - View
Lonicera japonica Lj2A34T52 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_21620 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_3_53060 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_0 - View
Malus domestica MD12G1037900 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Chr12 + View
Malus domestica MD14G1036900 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Chr14 + View
Manihot esculenta Manes.08G032300 Chromosome08 + View
Medicago truncatula Medtr1g090640 double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein chr1 - View
Nelumbo nucifera Nn2g14268 chr2 + View
Olea europaea Oeu033279.1 scaffold279 - View
Petunia axillaris Peaxi162Scf00519g00425 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Peaxi162Scf00519 - View
Punica granatum PGR044G2541 NC_045134.1 - View
Prunus persica Prupe.2G071700 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Pp02 + View
Populus trichocarpa Potri.008G017600 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Chr08 + View
Populus trichocarpa Potri.010G241600 PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Chr10 + View
Quercus lobata QL04p047091 4 + View
Rhododendron simsii Rhsim03G0096500 chr03 - View
Salvia bowleyana SalBow3G3259 GWHASIU00000006 - View
Salix brachista Sabra10G0189100 GWHAAZH00000010 + View
Salix brachista Sabra16G0072200 GWHAAZH00000016 - View
Salix brachista Sabra08G0011200 GWHAAZH00000008 + View
Sechium edule Sed0014075 LG02 + View
Sechium edule Sed0006904 LG03 - View
Solanum lycopersicum Solyc11g006650.3 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KPR9_ARTAN) SL4.0ch11 - View
Solanum lycopersicum Solyc05g055200.4 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1KPR9_ARTAN) SL4.0ch05 + View
Schrenkiella parvula Sp4g18240 KOG1051 - Chaperone HSP104 and related ATP-dependent Clp proteases ch4-6 - View
Schrenkiella parvula Sp5g09810 PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED ch5-1 + View
Solanum pennellii Sopen05g033630 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | INVOLVED IN: protein metabolic process | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Clp, N-terminal | BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Spenn-ch05 + View
Solanum pennellii Sopen11g002580 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | INVOLVED IN: protein metabolic process | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Clp, N-terminal | BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400028236 Conserved gene of unknown function ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400007602 Conserved gene of unknown function ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400023497 Conserved gene of unknown function ST4.03ch05 + View
Trochodendron aralioides TAR623G0048 group7 - View
Theobroma cacao Thecc.10G117000 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Chromosome_10 - View
Trifolium pratense TPR.G19788 Tp57577_TGAC_v2_scaf_320 - View
Tripterygium wilfordii TWI53G1675 NC_052244.1 - View
Tripterygium wilfordii TWI15G0257 NC_052247.1 - View
Tripterygium wilfordii TWI38G1516 NC_052252.1 - View
Vaccinium macrocarpon vmacro07267 Similar to SMXL3: Protein SMAX1-LIKE 3 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G1604 CM024071.1 - View
Vitis vinifera GSVIVG01034648001 chr13 + View