Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047109 Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao] Chr7 + View
CSS0015465 DNA binding protein, putative [Ricinus communis] Contig86 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G9270 LG-3 + View
Acer truncatum Atru.chr1.248 chr1 + View
Actinidia chinensis Actinidia31866 Lachesis_group21 + View
Arabidopsis lyrata AL8G27870 scaffold_8 - View
Avicennia marina MSTRG.8679 ScioBoG_11560_HRSCAF_11609 - View
Amaranthus hybridus Ah.07g206020 Transcription factor SPEECHLESS (Basic helix-loop-helix protein 98) (AtbHLH98) (bHLH 98) (Transcription factor EN 19) (bHLH transcription factor bHLH098) AmaHy_arrow1_Scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3LK14C PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WNQ00V PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SRX4YB PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XPNG35 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT5G53210 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. Its transcript levels change after inducing MUTE expression in a mute background. SPEECHLESS (SPCH)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06120.1)%3B Has 3630 Blast hits to 3207 proteins in 306 species: Archae - 0%3B Bacteria - 54%3B Metazoa - 562%3B Fungi - 218%3B Plants - 2401%3B Viruses - 108%3B Other Eukaryotes - 287 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB05g22024 ChrB05 - View
Brassica carinata BcaB08g35683 ChrB08 - View
Brassica carinata BcaC03g14443 ChrC03 + View
Brassica carinata BcaC04g20485 ChrC04 + View
Brassica napus C02p18570 C02 + View
Brassica napus A10p10730 A10 - View
Brassica napus C09p43020 C09 - View
Brassica napus A02p11200 A02 + View
Brassica oleracea BolC2t07998H C2 + View
Brassica oleracea BolC9t57172H C9 - View
Brassica rapa BraA02t06183Z A02 + View
Brassica rapa BraA10t43154Z A10 - View
Beta vulgaris EL10Ac3g05346 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Chr3_EL10_PGA_scaffold7 - View
Capsicum annuum CAN.G108.27 PGAv.1.6.scaffold108 - View
Cannabis sativa CANSAT21G0757 NC_044374.1 - View
Cicer arietinum L. Ca_12680_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_16673_v3 Ca_LG5_v3 + View
Corylus avellana Haze_00113 Similar to SPCH: Transcription factor SPEECHLESS (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc02_g01870 Transcription factor SPEECHLESS chr2 - View
Citrus clementina Ciclev10007150m.g scaffold_9 + View
Ceratophyllum demersum CDE02G1113 1 - View
Cardamine hirsuta CARHR266280 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr8 - View
Carya illinoinensis CiPaw.06G007600 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS Chr06 + View
Carya illinoinensis CiPaw.05G257800 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS Chr05 - View
Carica papaya Cpa.g.sc3.51 supercontig_3 + View
Chenopodium quinoa AUR62006151 SPCH: Transcription factor SPEECHLESS C_Quinoa_Scaffold_1001 - View
Chenopodium quinoa AUR62019337 SPCH: Transcription factor SPEECHLESS C_Quinoa_Scaffold_3107 + View
Capsella rubella Carub.0008s1341 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS scaffold_8 - View
Cucumis sativus L. CsaV3_3G021970 transcription factor SPEECHLESS chr3 + View
Daucus carota DCAR_020305 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_010625 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv35307 GWHABJS00000009 - View
Davidia involucrata Dinv28336 GWHABJS00000004 - View
Durio zibethinus Duzib205G1770 NW_019168381.1 + View
Durio zibethinus Duzib068G1172 NW_019167838.1 - View
Durio zibethinus Duzib084G1284 NW_019167827.1 - View
Eucalyptus grandis Eucgr.A02667 Chr01 - View
Erythranthe guttata Migut.F00243 scaffold_6 - View
Erythranthe guttata Migut.F01050 scaffold_6 - View
Eutrema salsugineum Thhalv10013877m.g PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS scaffold_2 + View
Fragaria x ananassa FAN10G2019 KOG2483 - Upstream transcription factor 2/L-myc-2 protein Fvb7-1 + View
Fragaria x ananassa FAN06G1711 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Fvb7-2 + View
Fragaria x ananassa FAN06G0524 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS Fvb7-2 + View
Fragaria x ananassa FAN10G1806 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS Fvb7-1 + View
Fragaria x ananassa FAN01G1171 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS Fvb7-4 - View
Fragaria x ananassa FAN03G0208 KOG2483 - Upstream transcription factor 2/L-myc-2 protein Fvb7-3 - View
Fragaria vesca FvH4_7g31020 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Fvb7 + View
Gossypium hirsutum Gohir.A12G251700 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS A12 - View
Gossypium hirsutum Gohir.D12G252600 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS D12 - View
Glycine max Glyma.04G238400 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Gm04 - View
Glycine max Glyma.06G125500 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Gm06 + View
Gossypium raimondii Gorai.008G270700 Chr08 - View
Helianthus annuus HanXRQChr14g0462861 Putative myc-type, basic helix-loop-helix (bHLH) domain HanXRQChr14 + View
Helianthus annuus HanXRQChr06g0167621 Putative myc-type, basic helix-loop-helix (bHLH) domain HanXRQChr06 - View
Lupinus albus Lalb_Chr11g0066561 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS Lalb_Chr11 + View
Lupinus albus Lalb_Chr08g0240581 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS Lalb_Chr08 - View
Lotus japonicus Lj1g0020485 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS chr1 - View
Lonicera japonica Lj3A910T46 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_2_134201 Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_8_6081 Lsat_1_v8_lg_8 - View
Magnolia biondii MBI07_g24346_MAGBIO AED:0.05 Chr07 - View
Malus domestica MD07G1285100 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr07 + View
Malus domestica MD01G1215200 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr01 + View
Manihot esculenta Manes.06G157200 Chromosome06 + View
Manihot esculenta Manes.14G018700 Chromosome14 - View
Medicago truncatula Medtr3g090850 transcription factor chr3 + View
Medicago truncatula Medtr1g028470 basic helix loop helix (BHLH) DNA-binding family protein chr1 - View
Nelumbo nucifera Nn1g01824 chr1 + View
Nicotiana tabacum Nitab4.5_0002589g0010 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0002589 + View
Olea europaea Oeu049101.1 chr12 - View
Olea europaea Oeu041351.1 chr1 - View
Petunia axillaris Peaxi162Scf00904g00215 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00904 - View
Punica granatum PGR042G3943 NC_045130.1 - View
Prunus persica Prupe.2G307300 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Pp02 + View
Pisum sativum Psat5g079800 Helix-loop-helix DNA-binding domain chr5LG3 + View
Pisum sativum Psat6g038600 Helix-loop-helix DNA-binding domain chr6LG2 - View
Papaver somniferum PSO135G1010 NW_020631041.1 + View
Populus trichocarpa Potri.015G022300 KOG4447 - Transcription factor TWIST Chr15 - View
Populus trichocarpa Potri.012G031800 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Chr12 + View
Phaseolus vulgaris Phvul.009G137400 PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Chr09 + View
Quercus lobata QL09p010926 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0380101 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim09G0203800 chr09 + View
Striga asiatica SGA_v2.0_scaffold55G19738 scaffold55 + View
Striga asiatica SGA_v2.0_scaffold192G40579 scaffold192 - View
Salvia bowleyana SalBow2G2864 GWHASIU00000007 - View
Salvia bowleyana SalBow4G1572 GWHASIU00000008 - View
Salix brachista Sabra12G0021300 GWHAAZH00000012 - View
Salix brachista Sabra15G0016600 GWHAAZH00000015 - View
Simmondsia chinensis Sc19g0001130 GWHAASQ00000019 + View
Sechium edule Sed0018808 LG13 - View
Schrenkiella parvula Sp6g15390 PTHR11514//PTHR11514:SF58 - MYC // TRANSCRIPTION FACTOR SPEECHLESS ch6-6 - View
Solanum pennellii Sopen03g003370 Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. | SPEECHLESS (SPCH) | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400009101 DNA binding protein ST4.03ch03 - View
Theobroma cacao Thecc.03G192900 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104811934 transcription factor SPEECHLESS NW_010965372.1 - View
Trifolium pratense TPR.G17294 Tp57577_TGAC_v2_LG2 + View
Trifolium pratense TPR.G33319 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI14G0427 NC_052249.1 - View
Vaccinium macrocarpon vmacro10107 Similar to SPCH: Transcription factor SPEECHLESS (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1036 CM024072.1 + View
Vitis vinifera GSVIVG01028719001 chr16 + View