Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011640 Indeterminate(ID)-domain 2 [Theobroma cacao] Chr13 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1229 chr5 + View
Actinidia chinensis Actinidia32245 Lachesis_group19 - View
Actinidia chinensis Actinidia21061 Lachesis_group9 - View
Actinidia chinensis Actinidia24842 Lachesis_group15 - View
Avicennia marina MSTRG.21611 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.18177 ScioBoG_22153_HRSCAF_22259 + View
Aquilegia oxysepala Aqoxy5G00698 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.76HL2D PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EPUL7W PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PBKK9N PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AY8SNM PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.02 - View
Amborella trichopoda ATR0706G277 AmTr_v1.0_scaffold00057 + View
Brassica oleracea BolC2t09932H C2 + View
Cannabis sativa CANSAT25G3288 NC_044370.1 - View
Cannabis sativa CANSAT25G2031 NC_044370.1 - View
Cicer arietinum L. Ca_09135_v3 Ca_LG3_v3 - View
Corylus avellana Haze_04165 Similar to MGP: Zinc finger protein MAGPIE (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_04859 Similar to GAF1: Zinc finger protein GAI-ASSOCIATED FACTOR 1 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g20530 Putative Zinc finger protein MAGPIE chr1 - View
Citrus clementina Ciclev10023420m.g scaffold_3 - View
Citrus clementina Ciclev10000982m.g scaffold_5 + View
Carpinus fangiana Cfa006610 Cfa02 + View
Carpinus fangiana Cfa005984 Cfa02 - View
Carya illinoinensis CiPaw.08G098700 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr08 + View
Carya illinoinensis CiPaw.07G019800 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr07 + View
Carya illinoinensis CiPaw.07G103800 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr07 - View
Citrullus lanatus ClCG09G006180 Zinc finger protein CG_Chr09 + View
Cucumis melo MELO3C016043.2 protein indeterminate-domain 2-like chr01 + View
Corchorus olitorius COL.COLO4_07997 hypothetical protein AWUE01013551.1 + View
Carica papaya Cpa.g.sc9.191 supercontig_9 - View
Carica papaya Cpa.g.sc48.75 supercontig_48 + View
Cucumis sativus L. CsaV3_7G028950 protein indeterminate-domain 2-like chr7 - View
Daucus carota DCAR_012403 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_002807 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19732 GWHABJS00000007 + View
Durio zibethinus Duzib177G0852 NW_019168004.1 + View
Durio zibethinus Duzib138G1955 NW_019167893.1 + View
Durio zibethinus Duzib133G0348 NW_019167938.1 + View
Erigeron canadensis ECA247G4084 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA248G0948 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.H01190 Chr08 + View
Erythranthe guttata Migut.D00185 scaffold_4 - View
Fragaria x ananassa FAN27G2968 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb2-1 - View
Fragaria x ananassa FAN24G0694 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb2-2 + View
Fragaria x ananassa FAN20G0439 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb2-3 + View
Fragaria x ananassa FAN15G0210 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb2-4 + View
Fragaria x ananassa FAN05G3823 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED Fvb6-3 - View
Gossypium hirsutum Gohir.A12G009800 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.D12G009800 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED D12 - View
Gossypium hirsutum Gohir.A11G116200 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED A11 + View
Gossypium hirsutum Gohir.D11G276500 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED D11 + View
Gossypium hirsutum Gohir.D11G121400 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.A11G266200 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED A11 + View
Glycine max Glyma.02G153900 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm02 - View
Glycine max Glyma.10G020201 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm10 + View
Glycine max Glyma.03G211700 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm03 - View
Glycine max Glyma.19G208900 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm19 - View
Gossypium raimondii Gorai.007G130100 Chr07 + View
Gossypium raimondii Gorai.008G009800 Chr08 - View
Gossypium raimondii Gorai.007G298600 Chr07 + View
Lotus japonicus Lj1g0027872 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED chr1 - View
Lotus japonicus Lj5g0020678 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED chr5 - View
Lonicera japonica Lj1A35T64 GWHAAZE00000001 + View
Malus domestica MD12G1216800 indeterminate(ID)-domain 2 Chr12 - View
Malus domestica MD11G1302300 Chr11 - View
Malus domestica MD03G1283900 indeterminate(ID)-domain 2 Chr03 + View
Malus domestica MD04G1203000 indeterminate(ID)-domain 2 Chr04 - View
Manihot esculenta Manes.09G169000 Chromosome09 + View
Manihot esculenta Manes.05G065500 Chromosome05 + View
Nelumbo nucifera Nn3g21401 chr3 + View
Olea europaea Oeu046706.1 chr16 + View
Olea europaea Oeu047465.1 chr20 - View
Petunia axillaris Peaxi162Scf00067g01614 C2H2-like zinc finger protein Peaxi162Scf00067 + View
Petunia axillaris Peaxi162Scf00037g00092 C2H2-like zinc finger protein Peaxi162Scf00037 + View
Punica granatum PGR119G1220 NC_045132.1 + View
Prunus persica Prupe.8G255800 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Pp08 - View
Pisum sativum Psat3g023360 Zinc-finger double-stranded RNA-binding chr3LG5 + View
Populus trichocarpa Potri.014G132700 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr14 + View
Populus trichocarpa Potri.005G027200 PTHR10593//PTHR10593:SF31//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED // SUBFAMILY NOT NAMED Chr05 - View
Populus trichocarpa Potri.013G019200 PTHR10593//PTHR10593:SF31//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED // SUBFAMILY NOT NAMED Chr13 - View
Populus trichocarpa Potri.002G208444 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr02 + View
Phaseolus vulgaris Phvul.001G204700 PTHR10593//PTHR10593:SF34 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr01 - View
Quercus lobata QL12p030551 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0293211 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim13G0014900 chr13 + View
Striga asiatica SGA_v2.0_scaffold1G00387 scaffold1 + View
Salix brachista Sabra13G0021600 GWHAAZH00000013 - View
Salix brachista Sabra05G0032500 GWHAAZH00000005 - View
Solanum lycopersicum Solyc01g099340.3 Protein indeterminate-domain 12 (AHRD V3.3 *** A0A2G2W7U4_CAPBA) SL4.0ch01 + View
Solanum lycopersicum Solyc09g074780.3 Protein indeterminate-domain 2 (AHRD V3.3 *** A0A1U8G2Y2_CAPAN) SL4.0ch09 + View
Solanum pennellii Sopen01g042900 MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. | Magpie (MGP) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein Spenn-ch01 + View
Solanum pennellii Sopen09g029630 nutcracker (NUC) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: primary root apical meristem, stem vascular system, embryo, root, embryonic root | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400024700 ATIDD4-DOMAIN 4 ST4.03ch01 + View
Trochodendron aralioides TAR633G2053 group2 + View
Trochodendron aralioides TAR362G0972 group17 - View
Trochodendron aralioides TAR365G0896 group16 - View
Theobroma cacao Thecc.01G294200 Indeterminate(ID)-domain 2 Chromosome_1 - View
Theobroma cacao Thecc.05G310800 C2H2 and C2HC zinc fingers superfamily protein Chromosome_5 + View
Trifolium pratense TPR.G9281 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI23G0643 NC_052239.1 + View
Tripterygium wilfordii TWI59G0153 NC_052248.1 + View
Vaccinium macrocarpon vmacro02486 Similar to GAF1: Zinc finger protein GAI-ASSOCIATED FACTOR 1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0295 CM024071.1 - View
Vigna mungo VMungo1383G3472 CM024070.1 - View
Vitis vinifera GSVIVG01010961001 chr7 - View
Zea mays Zm00001eb142060 Zm00001e018716 Protein indeterminate-domain 11 3 + View