Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG4G18650 | LG-4 | - | View | |
Actinidia chinensis | Actinidia00477 | Lachesis_group12 | + | View | |
Actinidia chinensis | Actinidia12091 | Lachesis_group11 | - | View | |
Arabidopsis lyrata | AL7G13950 | scaffold_7 | - | View | |
Avicennia marina | MSTRG.2924 | ScioBoG_102835_HRSCAF_103059 | - | View | |
Avicennia marina | MSTRG.20124 | ScioBoG_26180_HRSCAF_26306 | + | View | |
Avicennia marina | MSTRG.3401 | ScioBoG_102836_HRSCAF_103072 | - | View | |
Amaranthus hybridus | Ah.01g019900 | Putative pentatricopeptide repeat-containing protein At3g01580 | AmaHy_arrow1_Scaffold_1 | + | View |
Amaranthus hybridus | Ah.02g123920 | Pentatricopeptide repeat-containing protein At1g19720 (Protein DYW7) | AmaHy_arrow1_Scaffold_2 | + | View |
Aquilegia oxysepala | Aqoxy5G01419 | CHR05 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.V27VHE | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | arahy.Tifrunner.gnm1.Arahy.05 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.M7CDJN | PF01535//PF02181//PF13041 - PPR repeat (PPR) // Formin Homology 2 Domain (FH2) // PPR repeat family (PPR_2) | arahy.Tifrunner.gnm1.Arahy.15 | + | View |
Arabidopsis thaliana | AT3G50420 | Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 48124 Blast hits to 13590 proteins in 226 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 116%3B Fungi - 107%3B Plants - 47293%3B Viruses - 0%3B Other Eukaryotes - 602 (source: NCBI BLink). | Chr3 | - | View |
Amborella trichopoda | ATR0733G089 | AmTr_v1.0_scaffold00059 | + | View | |
Amborella trichopoda | ATR0733G220 | AmTr_v1.0_scaffold00059 | + | View | |
Brassica carinata | BcaC04g23128 | ChrC04 | - | View | |
Brassica napus | A09p09980 | A09 | + | View | |
Brassica oleracea | BolC5t33376H | C5 | + | View | |
Brassica oleracea | BolC1t00207H | C1 | - | View | |
Brassica rapa | BraA05t21902Z | A05 | + | View | |
Beta vulgaris | EL10Ac6g14851 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Chr6_EL10_PGA_scaffold0 | - | View |
Capsicum annuum | CAN.G836.35 | PGAv.1.6.scaffold836 | - | View | |
Cicer arietinum L. | Ca_18647_v3 | Ca_LG6_v3 | + | View | |
Cicer arietinum L. | Ca_24801_v3 | Ca_LG8_v3 | + | View | |
Corylus avellana | Haze_15194 | Similar to PCMP-E85: Pentatricopeptide repeat-containing protein At3g50420 (Arabidopsis thaliana OX%3D3702) | 11 | - | View |
Coffea canephora | Cc02_g18260 | Putative Pentatricopeptide repeat-containing protein At3g57430, chloroplastic | chr2 | + | View |
Coffea canephora | Cc07_g05570 | Putative Pentatricopeptide repeat-containing protein At3g50420 | chr7 | - | View |
Citrus clementina | Ciclev10025110m.g | scaffold_7 | - | View | |
Ceratophyllum demersum | CDE04G3249 | 2 | + | View | |
Ceratophyllum demersum | CDE01G0195 | 11 | + | View | |
Cardamine hirsuta | CARHR159930 | Pentatricopeptide repeat-containing protein | Chr5 | - | View |
Cardamine hirsuta | CARHR245340 | Pentatricopeptide repeat-containing protein | Chr7 | + | View |
Citrullus lanatus | ClCG02G012830 | Pentatricopeptide repeat-containing protein, putative | CG_Chr02 | - | View |
Corchorus olitorius | COL.COLO4_11328 | hypothetical protein | AWUE01014685.1 | - | View |
Carica papaya | Cpa.g.sc23.171 | supercontig_23 | - | View | |
Chenopodium quinoa | AUR62027211 | PCMP-H24: Pentatricopeptide repeat-containing protein At4g02750 | C_Quinoa_Scaffold_2924 | + | View |
Cucumis sativus L. | CsaV3_2G016910 | pentatricopeptide repeat-containing protein At3g50420 | chr2 | - | View |
Davidia involucrata | Dinv42116 | GWHABJS00000002 | - | View | |
Durio zibethinus | Duzib264G0761 | NW_019167960.1 | + | View | |
Erigeron canadensis | ECA246G5202 | Conyza_canadensis_scaffold:8 | + | View | |
Erigeron canadensis | ECA238G0286 | Conyza_canadensis_scaffold:6 | + | View | |
Eucalyptus grandis | Eucgr.I00931 | Chr09 | + | View | |
Eucalyptus grandis | Eucgr.I01016 | Chr09 | + | View | |
Eucalyptus grandis | Eucgr.G01514 | Chr07 | + | View | |
Erythranthe guttata | Migut.B00293 | scaffold_2 | + | View | |
Erythranthe guttata | Migut.H00484 | scaffold_8 | + | View | |
Eutrema salsugineum | Thhalv10003807m.g | PF01535//PF12854//PF13041//PF13176 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Tetratricopeptide repeat (TPR_7) | scaffold_6 | - | View |
Eutrema salsugineum | Thhalv10022209m.g | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_13 | + | View |
Fragaria x ananassa | FAN20G1433 | PF01535//PF02362//PF12854//PF13041 - PPR repeat (PPR) // B3 DNA binding domain (B3) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) | Fvb2-3 | - | View |
Fragaria x ananassa | FAN28G1032 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Fvb1-1 | - | View |
Fragaria x ananassa | FAN26G2505 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Fvb1-2 | + | View |
Fragaria x ananassa | FAN19G2211 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Fvb1-4 | - | View |
Fragaria x ananassa | FAN26G0706 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Fvb1-2 | - | View |
Fragaria vesca | FvH4_1g14840 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Fvb1 | - | View |
Gossypium hirsutum | Gohir.A12G068700 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | A12 | - | View |
Gossypium hirsutum | Gohir.D12G090500 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | D12 | - | View |
Glycine max | Glyma.11G059600 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Gm11 | + | View |
Glycine max | Glyma.06G034800 | K07441 - beta-1,4-N-acetylglucosaminyltransferase (ALG14) | Gm06 | - | View |
Gossypium raimondii | Gorai.008G072500 | Chr08 | - | View | |
Helianthus annuus | HanXRQChr12g0378281 | Probable pentatricopeptide repeat (PPR) superfamily protein | HanXRQChr12 | - | View |
Lupinus albus | Lalb_Chr16g0378131 | PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) | Lalb_Chr16 | - | View |
Lupinus albus | Lalb_Chr05g0227161 | Lalb_Chr05 | + | View | |
Lupinus albus | Lalb_Chr09g0322811 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Lalb_Chr09 | - | View |
Lotus japonicus | Lj4g0022140 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | chr4 | - | View |
Lotus japonicus | Lj3g0007465 | PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) | chr3 | - | View |
Lotus japonicus | Lj2g0003546 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | chr2 | + | View |
Lonicera japonica | Lj9P366T48 | GWHAAZE00000009 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_3_92341 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Lsat_1_v8_lg_3 | + | View |
Magnolia biondii | MBI16_g19899_MAGBIO | AED:0.00 | Chr16 | + | View |
Malus domestica | MD15G1272300 | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr15 | - | View |
Malus domestica | MD02G1157600 | SLOW GROWTH 1 | Chr02 | - | View |
Manihot esculenta | Manes.12G095400 | Chromosome12 | + | View | |
Medicago truncatula | Medtr8g479320 | PPR containing plant-like protein | chr8 | - | View |
Medicago truncatula | Medtr5g018370 | PPR containing plant-like protein | chr5 | + | View |
Medicago truncatula | Medtr3g100760 | PPR domain protein | chr3 | + | View |
Nelumbo nucifera | Nn5g29385 | chr5 | + | View | |
Nicotiana tabacum | Nitab4.5_0000108g0310 | Pentatricopeptide repeat, Tetratricopeptide-like helical | Nitab4.5_0000108 | - | View |
Nicotiana tabacum | Nitab4.5_0001014g0050 | Pentatricopeptide repeat, Tetratricopeptide-like helical | Nitab4.5_0001014 | + | View |
Petunia axillaris | Peaxi162Scf00993g00007 | Pentatricopeptide repeat-containing protein | Peaxi162Scf00993 | - | View |
Punica granatum | PGR119G1872 | NC_045132.1 | - | View | |
Prunus persica | Prupe.8G112700 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Pp08 | + | View |
Pisum sativum | Psat7g120720 | PPR repeat family | chr7LG7 | + | View |
Papaver somniferum | PSO170G4551 | NC_039360.1 | - | View | |
Populus trichocarpa | Potri.002G130900 | PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) | Chr02 | - | View |
Populus trichocarpa | Potri.014G038900 | PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) | Chr14 | - | View |
Populus trichocarpa | Potri.005G131800 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Chr05 | - | View |
Phaseolus vulgaris | Phvul.003G292800 | PF01535//PF13812//PF14432 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) | Chr03 | - | View |
Phaseolus vulgaris | Phvul.002G022400 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Chr02 | + | View |
Rosa chinensis | RcHm_v2.0_Chr2g0103131 | RcHm_v2.0_Chr2 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0103801 | RcHm_v2.0_Chr2 | - | View | |
Rhododendron simsii | Rhsim08G0106400 | chr08 | + | View | |
Rhododendron simsii | Rhsim11G0170500 | chr11 | - | View | |
Striga asiatica | SGA_v2.0_scaffold204G41613 | scaffold204 | + | View | |
Striga asiatica | SGA_v2.0_scaffold15G07197 | scaffold15 | + | View | |
Salvia bowleyana | SalBow6G6560 | GWHASIU00000002 | + | View | |
Salix brachista | Sabra14G0028300 | GWHAAZH00000014 | - | View | |
Salix brachista | Sabra05G0107100 | GWHAAZH00000005 | - | View | |
Simmondsia chinensis | Sc07g0000100 | GWHAASQ00000007 | + | View | |
Solanum lycopersicum | Solyc02g090240.4 | Pentatricopeptide repeat (AHRD V3.3 *** A0A200QYC4_9MAGN) | SL4.0ch02 | - | View |
Solanum pennellii | Sopen02g034930 | Pentatricopeptide repeat (PPR) superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat , Tetratricopeptide-like helical | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein | Spenn-ch02 | - | View |
Solanum tuberosum | PGSC0003DMG403010073 | Pentatricopeptide repeat-containing protein | ST4.03ch02 | + | View |
Trochodendron aralioides | TAR376G0558 | group14 | - | View | |
Trochodendron aralioides | TAR628G0987 | group5 | + | View | |
Theobroma cacao | Thecc.01G048200 | Chromosome_1 | - | View | |
Tarenaya hassleriana | THA.LOC104819201 | putative pentatricopeptide repeat-containing protein At3g47840 | NW_010966177.1 | - | View |
Trifolium pratense | TPR.G11368 | Tp57577_TGAC_v2_scaf_459 | + | View | |
Tripterygium wilfordii | TWI09G1516 | NC_052245.1 | - | View | |
Tripterygium wilfordii | TWI53G1976 | NC_052244.1 | - | View | |
Vigna mungo | VMungo1215G0499 | CM024074.1 | + | View | |
Vitis vinifera | GSVIVG01031849001 | chr3 | - | View |