Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G20330 LG-2 + View
Aethionema arabicum Aa31LG3G13270 LG-3 - View
Acer truncatum Atru.chr7.597 chr7 - View
Actinidia chinensis Actinidia38631 Lachesis_group8 - View
Arabidopsis lyrata AL3G53040 scaffold_3 - View
Arabidopsis lyrata AL8G33360 scaffold_8 - View
Avicennia marina MSTRG.6225 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.26217 ScioBoG_52287_HRSCAF_52434 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.53KNFG PTHR21736//PTHR21736:SF13//PTHR31262//PTHR31262:SF0 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7U0T6N PTHR21736//PTHR21736:SF13//PTHR31262//PTHR31262:SF0 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT5G57380 Fibronectin type III domain-containing protein Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2%2C VERNALIZATION 2%2C are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE)%2C CURLY LEAF (CLF)%2C and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. VERNALIZATION INSENSITIVE 3 (VIN3)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423%2C plant (InterPro:IPR004082)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Fibronectin%2C type III-like fold (InterPro:IPR008957)%2C Fibronectin%2C type III (InterPro:IPR003961)%3B BEST Arabidopsis thaliana protein match is: vernalization5/VIN3-like (TAIR:AT4G30200.3)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G18870 vernalization5/VIN3-like protein vernalization5/VIN3-like (VEL3)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B BEST Arabidopsis thaliana protein match is: vernalization5/VIN3-like (TAIR:AT4G30200.2)%3B Has 107 Blast hits to 107 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 107%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0580G281 AmTr_v1.0_scaffold00019 + View
Brassica carinata BcaC09g51802 ChrC09 - View
Brassica carinata BcaC01g06493 ChrC01 + View
Brassica carinata BcaB03g16677 ChrB03 + View
Brassica napus C03p15020 C03 + View
Brassica napus A03p12870 A03 + View
Brassica oleracea BolC1t00876H C1 + View
Brassica oleracea BolC3t13944H C3 + View
Brassica rapa BraA01t00739Z A01 + View
Brassica rapa BraA03t10595Z A03 + View
Beta vulgaris EL10Ac8g18291 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr8_EL10_PGA_scaffold4 - View
Cannabis sativa CANSAT11G0296 NC_044377.1 - View
Cicer arietinum L. Ca_21233_v3 Ca_LG7_v3 + View
Corylus avellana Haze_22086 Similar to VIL2: VIN3-like protein 2 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc06_g13170 Putative Protein VERNALIZATION INSENSITIVE 3 chr6 - View
Citrus clementina Ciclev10007562m.g scaffold_1 - View
Carpinus fangiana Cfa013497 Cfa05 - View
Cardamine hirsuta CARHR271180 Protein VERNALIZATION insensitive 3 Chr8 - View
Carya illinoinensis CiPaw.08G035600 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr08 - View
Carya illinoinensis CiPaw.07G192900 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr07 + View
Citrullus lanatus ClCG11G012100 Protein VERNALIZATION INSENSITIVE CG_Chr11 - View
Citrullus lanatus ClCG06G013420 Protein VERNALIZATION INSENSITIVE CG_Chr06 - View
Cucumis melo MELO3C004019.2 VIN3-like protein 2 chr05 - View
Capsella rubella Carub.0008s1790 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED scaffold_8 - View
Capsella rubella Carub.0003s3310 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_1G031670 VIN3-like protein 2 chr1 + View
Cucumis sativus L. CsaV3_2G008450 VIN3-like protein 2 chr2 + View
Daucus carota DCAR_014697 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv43386 GWHABJS00000085 + View
Davidia involucrata Dinv41240 GWHABJS00000013 - View
Durio zibethinus Duzib150G1038 NW_019167882.1 + View
Durio zibethinus Duzib168G1905 NW_019168159.1 - View
Durio zibethinus Duzib170G0637 NW_019167871.1 + View
Erigeron canadensis ECA240G2627 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA236G0788 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.C00151 Chr03 - View
Erythranthe guttata Migut.K00239 scaffold_11 - View
Erythranthe guttata Migut.J01491 scaffold_10 + View
Eutrema salsugineum Thhalv10024549m.g scaffold_1 + View
Eutrema salsugineum Thhalv10012995m.g PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED scaffold_2 + View
Fragaria x ananassa FAN22G1170 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Fvb4-1 - View
Fragaria x ananassa FAN17G0026 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Fvb4-2 - View
Fragaria x ananassa FAN07G0386 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Fvb4-4 + View
Fragaria x ananassa FAN12G3094 PTHR21736//PTHR21736:SF13 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Fvb4-3 + View
Gossypium hirsutum Gohir.D05G005000 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED D05 - View
Glycine max Glyma.17G062500 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Gm17 - View
Glycine max Glyma.13G097000 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Gm13 + View
Gossypium raimondii Gorai.009G004900 Chr09 - View
Lupinus albus Lalb_Chr07g0180531 PTHR21736//PTHR21736:SF13 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Lalb_Chr07 + View
Lupinus albus Lalb_Chr13g0300181 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Lalb_Chr13 - View
Lotus japonicus Lj4g0003268 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED chr4 - View
Magnolia biondii MBI16_g31781_MAGBIO AED:0.04 Chr16 + View
Malus domestica MD16G1256500 vernalization5/VIN3-like Chr16 - View
Malus domestica MD13G1252500 vernalization5/VIN3-like Chr13 - View
Manihot esculenta Manes.06G023300 Chromosome06 + View
Medicago truncatula Medtr4g127880 protein vernalization insensitive-like protein chr4 - View
Punica granatum PGR044G0145 NC_045134.1 - View
Prunus persica Prupe.1G084700 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Pp01 - View
Populus trichocarpa Potri.018G091500 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr18 - View
Phaseolus vulgaris Phvul.003G144400 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED Chr03 - View
Quercus lobata QL02p097917 CM012294 + View
Rhododendron simsii Rhsim03G0264800 chr03 + View
Rhododendron simsii Rhsim01G0003800 chr01 - View
Striga asiatica SGA_v2.0_scaffold12G06071 scaffold12 + View
Salvia bowleyana SalBow1G7903 GWHASIU00000001 + View
Salix brachista Sabra06G0128500 GWHAAZH00000006 - View
Salix brachista Sabra18G0078600 GWHAAZH00000018 - View
Sechium edule Sed0026985 LG03 - View
Sechium edule Sed0011605 LG12 - View
Schrenkiella parvula Sp7g28080 PTHR21736//PTHR21736:SF13 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN VERNALIZATION INSENSITIVE 3-RELATED ch7-5 - View
Schrenkiella parvula Sp3g32350 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED ch3-6 + View
Schrenkiella parvula Sp6g19100 PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED ch6-6 - View
Selenicereus undatus Hund09031 Scaffold_33676 - View
Theobroma cacao Thecc.09G176200 Vernalization5/VIN3-like Chromosome_9 - View
Tarenaya hassleriana THA.LOC104803491 VIN3-like protein 2 NW_010971389.1 - View
Trifolium pratense TPR.G5445 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI32G0091 NC_052254.1 + View
Tripterygium wilfordii TWI34G0864 NC_052235.1 - View
Vaccinium macrocarpon vmacro13128 Similar to VIL2: VIN3-like protein 2 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06010 Similar to VIL2: VIN3-like protein 2 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2198 CM024074.1 + View
Vitis vinifera GSVIVG01029220001 chr11 - View