Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia26891 Lachesis_group0 + View
Arabidopsis lyrata AL6G47908 scaffold_6 - View
Arabidopsis lyrata AL2G13670 scaffold_2 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4B0G7F PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W3SGY7 PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT1G62260 mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9)%2C an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9 (MEF9)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cytidine to uridine editing%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1)%3B Has 48341 Blast hits to 14172 proteins in 260 species: Archae - 3%3B Bacteria - 22%3B Metazoa - 134%3B Fungi - 182%3B Plants - 47365%3B Viruses - 0%3B Other Eukaryotes - 635 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT4G04370 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 51385 Blast hits to 13710 proteins in 213 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 41%3B Fungi - 119%3B Plants - 50626%3B Viruses - 0%3B Other Eukaryotes - 599 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC04g21288 ChrC04 - View
Brassica napus C09p33520 C09 + View
Brassica napus A09p26370 A09 + View
Brassica oleracea BolC9t56188H C9 + View
Brassica rapa BraA09t38211Z A09 + View
Beta vulgaris EL10Ac8g20105 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr8_EL10_PGA_scaffold4 + View
Capsicum annuum CAN.G1014.29 PGAv.1.6.scaffold1014 + View
Cannabis sativa CANSAT56G0123 NC_044371.1 + View
Corylus avellana Haze_12808 Similar to PCMP-E71: Putative pentatricopeptide repeat-containing protein At1g10330 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_06842 Similar to PCMP-E99: Pentatricopeptide repeat-containing protein At4g04370 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc05_g03730 Putative Ribonuclease S-7 chr5 - View
Citrus clementina Ciclev10018027m.g scaffold_2 + View
Ceratophyllum demersum CDE05G0229 3 + View
Carpinus fangiana Cfa014358 Cfa06 - View
Carpinus fangiana Cfa000177 Cfa01 - View
Cardamine hirsuta CARHR049870 Pentatricopeptide repeat-containing protein, putative Chr2 + View
Cardamine hirsuta CARHR253080 Pentatricopeptide repeat-containing protein Chr8 + View
Carya illinoinensis CiPaw.09G096600 PF13041 - PPR repeat family (PPR_2) Chr09 + View
Carica papaya Cpa.g.sc152.44 supercontig_152 + View
Chenopodium quinoa AUR62012742 PCMP-E99: Pentatricopeptide repeat-containing protein At4g04370 C_Quinoa_Scaffold_2715 + View
Capsella rubella Carub.0006s3221 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_6 - View
Capsella rubella Carub.0002s0275 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_2 + View
Daucus carota DCAR_027877 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_028362 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_008177 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv20091 GWHABJS00000020 + View
Davidia involucrata Dinv08752 GWHABJS00000013 - View
Durio zibethinus Duzib235G0261 NW_019167982.1 + View
Erigeron canadensis ECA234G4501 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.F00725 Chr06 - View
Erythranthe guttata Migut.H01584 scaffold_8 + View
Eutrema salsugineum Thhalv10023975m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_8 + View
Eutrema salsugineum Thhalv10028467m.g PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_3 + View
Fragaria x ananassa FAN21G2997 PF00295//PF01535//PF13041//PF13812 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb3-2 + View
Fragaria x ananassa FAN09G0413 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-2 + View
Fragaria x ananassa FAN05G1496 PF01535 - PPR repeat (PPR) Fvb6-3 + View
Fragaria x ananassa FAN25G3730 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb3-1 + View
Fragaria vesca FvH4_3g01610 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb3 - View
Gossypium hirsutum Gohir.D06G156500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D06 + View
Gossypium hirsutum Gohir.D07G191800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D07 + View
Gossypium hirsutum Gohir.A06G150300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A06 + View
Glycine max Glyma.09G006400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm09 + View
Glycine max Glyma.15G110800 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm15 + View
Gossypium raimondii Gorai.010G182900 Chr10 + View
Gossypium raimondii Gorai.001G214700 Chr01 + View
Lupinus albus Lalb_Chr15g0087711 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lalb_Chr15 - View
Lotus japonicus Lj6g0016342 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr6 + View
Lonicera japonica Lj1P1234T22 GWHAAZE00000001 + View
Malus domestica MD10G1325500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr10 + View
Malus domestica MD05G1350800 Tetratricopeptide repeat (TPR)-like superfamily protein Chr05 + View
Medicago truncatula Medtr2g024080 PPR containing plant-like protein chr2 + View
Nelumbo nucifera Nn1g07217 chr1 + View
Nicotiana tabacum Nitab4.5_0001409g0050 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0001409 + View
Olea europaea Oeu016060.1 chr6 - View
Petunia axillaris Peaxi162Scf00178g00067 Pentatricopeptide repeat-containing protein Peaxi162Scf00178 - View
Prunus persica Prupe.3G214500 PF01535 - PPR repeat (PPR) Pp03 - View
Prunus persica Prupe.4G016600 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Pp04 - View
Pisum sativum Psat4g003760 PPR repeat family chr4LG4 - View
Pisum sativum Psat1g178040 PPR repeat family chr1LG6 - View
Phaseolus vulgaris Phvul.006G047700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr06 - View
Phaseolus vulgaris Phvul.006G147000 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr06 - View
Quercus lobata QL05p072312 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0158781 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim13G0150900 chr13 + View
Striga asiatica SGA_v2.0_scaffold89G27477 scaffold89 + View
Simmondsia chinensis Sc05g0009400 GWHAASQ00000005 + View
Sechium edule Sed0015476 LG10 - View
Sechium edule Sed0003852 LG05 + View
Solanum lycopersicum Solyc02g080950.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XFX2_CAPBA) SL4.0ch02 + View
Schrenkiella parvula Sp6g04470 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch6-1 + View
Solanum pennellii Sopen02g025630 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400016465 Pentatricopeptide repeat-containing protein ST4.03ch02 + View
Trochodendron aralioides TAR627G0261 group6 - View
Trifolium pratense TPR.G13007 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI34G0847 NC_052235.1 + View
Tripterygium wilfordii TWI63G1215 NC_052240.1 - View
Tripterygium wilfordii TWI36G0778 NC_052237.1 + View
Vigna mungo VMungo0540G0511 CM024075.1 + View
Vigna mungo VMungo0251G1168 CM024069.1 - View
Vitis vinifera GSVIVG01012670001 chr10 - View