Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia26891 | Lachesis_group0 | + | View | |
Arabidopsis lyrata | AL6G47908 | scaffold_6 | - | View | |
Arabidopsis lyrata | AL2G13670 | scaffold_2 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.4B0G7F | PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | arahy.Tifrunner.gnm1.Arahy.14 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.W3SGY7 | PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | arahy.Tifrunner.gnm1.Arahy.04 | + | View |
Arabidopsis thaliana | AT1G62260 | mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9)%2C an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9 (MEF9)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cytidine to uridine editing%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1)%3B Has 48341 Blast hits to 14172 proteins in 260 species: Archae - 3%3B Bacteria - 22%3B Metazoa - 134%3B Fungi - 182%3B Plants - 47365%3B Viruses - 0%3B Other Eukaryotes - 635 (source: NCBI BLink). | Chr1 | - | View |
Arabidopsis thaliana | AT4G04370 | Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 51385 Blast hits to 13710 proteins in 213 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 41%3B Fungi - 119%3B Plants - 50626%3B Viruses - 0%3B Other Eukaryotes - 599 (source: NCBI BLink). | Chr4 | - | View |
Brassica carinata | BcaC04g21288 | ChrC04 | - | View | |
Brassica napus | C09p33520 | C09 | + | View | |
Brassica napus | A09p26370 | A09 | + | View | |
Brassica oleracea | BolC9t56188H | C9 | + | View | |
Brassica rapa | BraA09t38211Z | A09 | + | View | |
Beta vulgaris | EL10Ac8g20105 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Chr8_EL10_PGA_scaffold4 | + | View |
Capsicum annuum | CAN.G1014.29 | PGAv.1.6.scaffold1014 | + | View | |
Cannabis sativa | CANSAT56G0123 | NC_044371.1 | + | View | |
Corylus avellana | Haze_12808 | Similar to PCMP-E71: Putative pentatricopeptide repeat-containing protein At1g10330 (Arabidopsis thaliana OX%3D3702) | 5 | - | View |
Corylus avellana | Haze_06842 | Similar to PCMP-E99: Pentatricopeptide repeat-containing protein At4g04370 (Arabidopsis thaliana OX%3D3702) | 2 | + | View |
Coffea canephora | Cc05_g03730 | Putative Ribonuclease S-7 | chr5 | - | View |
Citrus clementina | Ciclev10018027m.g | scaffold_2 | + | View | |
Ceratophyllum demersum | CDE05G0229 | 3 | + | View | |
Carpinus fangiana | Cfa014358 | Cfa06 | - | View | |
Carpinus fangiana | Cfa000177 | Cfa01 | - | View | |
Cardamine hirsuta | CARHR049870 | Pentatricopeptide repeat-containing protein, putative | Chr2 | + | View |
Cardamine hirsuta | CARHR253080 | Pentatricopeptide repeat-containing protein | Chr8 | + | View |
Carya illinoinensis | CiPaw.09G096600 | PF13041 - PPR repeat family (PPR_2) | Chr09 | + | View |
Carica papaya | Cpa.g.sc152.44 | supercontig_152 | + | View | |
Chenopodium quinoa | AUR62012742 | PCMP-E99: Pentatricopeptide repeat-containing protein At4g04370 | C_Quinoa_Scaffold_2715 | + | View |
Capsella rubella | Carub.0006s3221 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_6 | - | View |
Capsella rubella | Carub.0002s0275 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_2 | + | View |
Daucus carota | DCAR_027877 | hypothetical protein | DCARv2_Chr8 | + | View |
Daucus carota | DCAR_028362 | hypothetical protein | DCARv2_Chr8 | + | View |
Daucus carota | DCAR_008177 | hypothetical protein | DCARv2_Chr2 | + | View |
Davidia involucrata | Dinv20091 | GWHABJS00000020 | + | View | |
Davidia involucrata | Dinv08752 | GWHABJS00000013 | - | View | |
Durio zibethinus | Duzib235G0261 | NW_019167982.1 | + | View | |
Erigeron canadensis | ECA234G4501 | Conyza_canadensis_scaffold:4 | - | View | |
Eucalyptus grandis | Eucgr.F00725 | Chr06 | - | View | |
Erythranthe guttata | Migut.H01584 | scaffold_8 | + | View | |
Eutrema salsugineum | Thhalv10023975m.g | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_8 | + | View |
Eutrema salsugineum | Thhalv10028467m.g | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | scaffold_3 | + | View |
Fragaria x ananassa | FAN21G2997 | PF00295//PF01535//PF13041//PF13812 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Fvb3-2 | + | View |
Fragaria x ananassa | FAN09G0413 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Fvb6-2 | + | View |
Fragaria x ananassa | FAN05G1496 | PF01535 - PPR repeat (PPR) | Fvb6-3 | + | View |
Fragaria x ananassa | FAN25G3730 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Fvb3-1 | + | View |
Fragaria vesca | FvH4_3g01610 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Fvb3 | - | View |
Gossypium hirsutum | Gohir.D06G156500 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | D06 | + | View |
Gossypium hirsutum | Gohir.D07G191800 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | D07 | + | View |
Gossypium hirsutum | Gohir.A06G150300 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | A06 | + | View |
Glycine max | Glyma.09G006400 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Gm09 | + | View |
Glycine max | Glyma.15G110800 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Gm15 | + | View |
Gossypium raimondii | Gorai.010G182900 | Chr10 | + | View | |
Gossypium raimondii | Gorai.001G214700 | Chr01 | + | View | |
Lupinus albus | Lalb_Chr15g0087711 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Lalb_Chr15 | - | View |
Lotus japonicus | Lj6g0016342 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | chr6 | + | View |
Lonicera japonica | Lj1P1234T22 | GWHAAZE00000001 | + | View | |
Malus domestica | MD10G1325500 | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr10 | + | View |
Malus domestica | MD05G1350800 | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr05 | + | View |
Medicago truncatula | Medtr2g024080 | PPR containing plant-like protein | chr2 | + | View |
Nelumbo nucifera | Nn1g07217 | chr1 | + | View | |
Nicotiana tabacum | Nitab4.5_0001409g0050 | Pentatricopeptide repeat, Tetratricopeptide-like helical | Nitab4.5_0001409 | + | View |
Olea europaea | Oeu016060.1 | chr6 | - | View | |
Petunia axillaris | Peaxi162Scf00178g00067 | Pentatricopeptide repeat-containing protein | Peaxi162Scf00178 | - | View |
Prunus persica | Prupe.3G214500 | PF01535 - PPR repeat (PPR) | Pp03 | - | View |
Prunus persica | Prupe.4G016600 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Pp04 | - | View |
Pisum sativum | Psat4g003760 | PPR repeat family | chr4LG4 | - | View |
Pisum sativum | Psat1g178040 | PPR repeat family | chr1LG6 | - | View |
Phaseolus vulgaris | Phvul.006G047700 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Chr06 | - | View |
Phaseolus vulgaris | Phvul.006G147000 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Chr06 | - | View |
Quercus lobata | QL05p072312 | 5 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0158781 | RcHm_v2.0_Chr2 | - | View | |
Rhododendron simsii | Rhsim13G0150900 | chr13 | + | View | |
Striga asiatica | SGA_v2.0_scaffold89G27477 | scaffold89 | + | View | |
Simmondsia chinensis | Sc05g0009400 | GWHAASQ00000005 | + | View | |
Sechium edule | Sed0015476 | LG10 | - | View | |
Sechium edule | Sed0003852 | LG05 | + | View | |
Solanum lycopersicum | Solyc02g080950.3 | Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XFX2_CAPBA) | SL4.0ch02 | + | View |
Schrenkiella parvula | Sp6g04470 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | ch6-1 | + | View |
Solanum pennellii | Sopen02g025630 | Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein | Spenn-ch02 | + | View |
Solanum tuberosum | PGSC0003DMG400016465 | Pentatricopeptide repeat-containing protein | ST4.03ch02 | + | View |
Trochodendron aralioides | TAR627G0261 | group6 | - | View | |
Trifolium pratense | TPR.G13007 | Tp57577_TGAC_v2_LG7 | + | View | |
Tripterygium wilfordii | TWI34G0847 | NC_052235.1 | + | View | |
Tripterygium wilfordii | TWI63G1215 | NC_052240.1 | - | View | |
Tripterygium wilfordii | TWI36G0778 | NC_052237.1 | + | View | |
Vigna mungo | VMungo0540G0511 | CM024075.1 | + | View | |
Vigna mungo | VMungo0251G1168 | CM024069.1 | - | View | |
Vitis vinifera | GSVIVG01012670001 | chr10 | - | View |