Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis thaliana AT2G40830 RING-H2 finger C1A Encodes a putative RING-H2 finger protein RHC1a. RING-H2 finger C1A (RHC1A)%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: cell wall%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3)%3B Has 10447 Blast hits to 10319 proteins in 284 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 2825%3B Fungi - 987%3B Plants - 5086%3B Viruses - 20%3B Other Eukaryotes - 1515 (source: NCBI BLink). RING-H2 finger C1A (RHC1A)%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: cell wall%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Cardamine hirsuta CARHR135950 RING/U-box superfamily protein Chr4 + View
Cucumis melo MELO3C019142.2 E3 ubiquitin-protein ligase RING1-like chr08 + View
Capsella rubella Carub.0004s2315 PTHR22763:SF44 - E3 UBIQUITIN LIGASE scaffold_4 + View
Eutrema salsugineum Thhalv10016932m.g PTHR22763:SF44 - E3 UBIQUITIN LIGASE scaffold_10 + View
Gossypium hirsutum Gohir.D01G181600 PTHR22763//PTHR22763:SF88 - RING ZINC FINGER PROTEIN // RING/U-BOX DOMAIN-CONTAINING PROTEIN D01 - View
Phaseolus vulgaris Phvul.005G027766 PTHR22763:SF46 - PROTEIN SAN1 Chr05 - View
Striga asiatica SGA_v2.0_scaffold106G30549 scaffold106 - View
Sechium edule Sed0008024 LG12 - View
Schrenkiella parvula Sp4g23160 PTHR22763:SF44 - E3 UBIQUITIN LIGASE ch4-6 + View
Trochodendron aralioides TAR623G0775 group7 + View
Vigna mungo VMungo1080G0195 CM024079.1 + View