Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G5640 LG-10 + View
Acer truncatum Atru.chr4.3074 chr4 + View
Arabidopsis lyrata AL1G54650 scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AIIC2U PF12624//PF16908 - N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8VA958 PTHR16166//PTHR16166:SF93 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // PROTEIN T08G11.1, ISOFORM A arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT1G48090 calcium-dependent lipid-binding family protein calcium-dependent lipid-binding family protein%3B FUNCTIONS IN: phosphoinositide binding%3B INVOLVED IN: signal transduction%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029)%2C Protein of unknown function DUF946 (InterPro:IPR009291)%2C Vacuolar protein sorting-associated protein (InterPro:IPR009543)%2C C2 calcium/lipid-binding domain%2C CaLB (InterPro:IPR008973)%3B BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2)%3B Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2%3B Bacteria - 15%3B Metazoa - 1181%3B Fungi - 466%3B Plants - 461%3B Viruses - 0%3B Other Eukaryotes - 607 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g33792 ChrB07 + View
Brassica napus A06p04720 A06 + View
Brassica napus C06p02470 C06 - View
Brassica oleracea BolC6t35374H C6 - View
Brassica rapa BraA06t23675Z A06 + View
Cannabis sativa CANSAT78G0281 NC_044376.1 + View
Cicer arietinum L. Ca_21394_v3 Ca_LG7_v3 + View
Corylus avellana Haze_00816 Protein of unknown function 1 + View
Coffea canephora Cc03_g00400 calcium-dependent lipid-binding family protein chr3 + View
Citrus clementina Ciclev10004114m.g scaffold_9 + View
Ceratophyllum demersum CDE02G3029 1 + View
Cardamine hirsuta CARHR037730 Vacuolar protein sorting-associated protein, putative Chr1 - View
Carya illinoinensis CiPaw.01G132700 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A Chr01 + View
Citrullus lanatus ClCG05G006770 Calcium-dependent lipid-binding family protein CG_Chr05 + View
Cucumis melo MELO3C006741.2 Calcium-dependent lipid-binding family protein chr06 + View
Carica papaya Cpa.g.sc146.55 supercontig_146 + View
Capsella rubella Carub.0001s3719 PTHR16166//PTHR16166:SF93 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // PROTEIN T08G11.1, ISOFORM A scaffold_1 - View
Cucumis sativus L. CsaV3_3G015400 calcium-dependent lipid-binding family protein chr3 + View
Daucus carota DCAR_026963 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_023379 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv29544 GWHABJS00000014 + View
Eucalyptus grandis Eucgr.H04089 Chr08 - View
Eutrema salsugineum Thhalv10011170m.g PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A scaffold_7 + View
Fragaria x ananassa FAN17G2279 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A Fvb4-2 + View
Fragaria x ananassa FAN12G2952 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A Fvb4-3 + View
Fragaria vesca FvH4_4g20980 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A Fvb4 - View
Gossypium hirsutum Gohir.D10G182400 PF00168//PF06101//PF06650//PF12624//PF16908//PF16909//PF16910 - C2 domain (C2) // Plant protein of unknown function (DUF946) (DUF946) // SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) // Repeating coiled region of VPS13 (VPS13_mid_rpt) D10 - View
Gossypium hirsutum Gohir.A10G175801 PF00168//PF06101//PF06398//PF06650//PF16909 - C2 domain (C2) // Plant protein of unknown function (DUF946) (DUF946) // Integral peroxisomal membrane peroxin (Pex24p) // SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) A10 - View
Glycine max Glyma.07G233100 PTHR16166//PTHR16166:SF93 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // PROTEIN T08G11.1, ISOFORM A Gm07 - View
Gossypium raimondii Gorai.011G204400 Chr11 - View
Gossypium raimondii Gorai.005G069700 Chr05 - View
Lupinus albus Lalb_Chr12g0200731 PF00169//PF06101//PF06650//PF12624//PF16908//PF16910 - PH domain (PH) // Plant protein of unknown function (DUF946) (DUF946) // SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) Lalb_Chr12 + View
Lupinus albus Lalb_Chr13g0298791 PF06101//PF06650//PF16909 - Plant protein of unknown function (DUF946) (DUF946) // SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) Lalb_Chr13 - View
Lotus japonicus Lj4g0014122 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A chr4 - View
Lonicera japonica Lj6C698G8 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_1_40321 Lsat_1_v8_lg_1 + View
Malus domestica MD16G1145300 calcium-dependent lipid-binding family protein Chr16 + View
Malus domestica MD13G1146800 calcium-dependent lipid-binding family protein Chr13 + View
Manihot esculenta Manes.03G209800 Chromosome03 + View
Medicago truncatula Medtr4g123110 calcium-dependent lipid-binding-like protein chr4 - View
Punica granatum PGR004G1484 NC_045131.1 + View
Prunus persica Prupe.1G110200 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A Pp01 + View
Papaver somniferum PSO761G0196 NW_020622381.1 - View
Papaver somniferum PSO210G1589 NC_039359.1 - View
Populus trichocarpa Potri.008G100600 PTHR16166//PTHR16166:SF93 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // PROTEIN T08G11.1, ISOFORM A Chr08 + View
Phaseolus vulgaris Phvul.003G119100 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A Chr03 - View
Quercus lobata QL06p013490 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0426501 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0245300 chr04 - View
Striga asiatica SGA_v2.0_scaffold157G37366 scaffold157 - View
Salvia bowleyana SalBow8G3461 GWHASIU00000004 + View
Salix brachista Sabra10G0116900 GWHAAZH00000010 - View
Salix brachista Sabra08G0076100 GWHAAZH00000008 + View
Sechium edule Sed0011983 LG12 - View
Sapria himalayana SHI00073 scaffold1_25991295 + View
Schrenkiella parvula Sp1g35040 PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A ch1-2 - View
Trochodendron aralioides TAR362G0616 group17 + View
Trifolium pratense TPR.G12636 Tp57577_TGAC_v2_LG2 - View
Vaccinium macrocarpon vmacro07983 Similar to VPS13C: Vacuolar protein sorting-associated protein 13C (Homo sapiens OX%3D9606) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01017643001 chr5 - View