Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0012583 PREDICTED: transcription factor bHLH96-like [Nelumbo nucifera] Chr9 - View
CSS0025816 unnamed protein product [Coffea canephora] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G6410 LG-7 - View
Acer truncatum Atru.chr3.1330 chr3 + View
Acer truncatum Atru.chr13.1109 chr13 + View
Actinidia chinensis Actinidia30799 Lachesis_group28 + View
Actinidia chinensis Actinidia10353 Lachesis_group26 + View
Arabidopsis lyrata AL1G36010 scaffold_1 - View
Avicennia marina MSTRG.2588 ScioBoG_102835_HRSCAF_103059 - View
Avicennia marina MSTRG.3751 ScioBoG_102836_HRSCAF_103072 + View
Aquilegia oxysepala Aqoxy6G00698 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1AZ5A9 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AEJR4S PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3CP6K6 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VFS8MG PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UDFT26 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z8D0NG PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT1G22490 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1)%3B Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 47%3B Fungi - 34%3B Plants - 1460%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g32259 ChrB07 - View
Brassica carinata BcaC05g26175 ChrC05 - View
Brassica napus C05p21590 C05 - View
Brassica napus A09p42280 A09 + View
Brassica oleracea BolC7t42641H C7 + View
Brassica oleracea BolC5t30854H C5 - View
Brassica rapa BraA09t39710Z A09 + View
Capsicum annuum CAN.G905.4 PGAv.1.6.scaffold905 + View
Cannabis sativa CANSAT01G0044 NC_044373.1 + View
Corylus avellana Haze_18248 Similar to BHLH96: Transcription factor bHLH96 (Arabidopsis thaliana OX%3D3702) 7 + View
Corylus avellana Haze_15039 Similar to BHLH96: Transcription factor bHLH96 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc07_g14500 Putative Transcription factor bHLH96 chr7 + View
Coffea canephora Cc10_g06580 Putative Transcription factor bHLH96 chr10 + View
Citrus clementina Ciclev10001811m.g scaffold_5 + View
Citrus clementina Ciclev10026131m.g scaffold_7 + View
Ceratophyllum demersum CDE06G1308 4 - View
Carpinus fangiana Cfa017904 Cfa07 - View
Carpinus fangiana Cfa004373 Cfa01 + View
Cardamine hirsuta CARHR022830 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr1 - View
Carya illinoinensis CiPaw.11G094900 PTHR11969//PTHR11969:SF22 - MAX DIMERIZATION, MAD // TRANSCRIPTION FACTOR BHLH71-RELATED Chr11 - View
Carya illinoinensis CiPaw.01G049100 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Chr01 + View
Carya illinoinensis CiPaw.12G064800 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Chr12 - View
Carya illinoinensis CiPaw.15G044700 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Chr15 + View
Carya illinoinensis CiPaw.16G032200 K18485 - myogenic factor 6 (MYF6, MRF4) Chr16 + View
Citrullus lanatus ClCG08G011360 basic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=320 CG_Chr08 - View
Cucumis melo MELO3C011052.2 transcription factor bHLH96 chr03 + View
Corchorus olitorius COL.COLO4_11989 hypothetical protein AWUE01014793.1 + View
Carica papaya Cpa.g.sc55.64 supercontig_55 + View
Carica papaya Cpa.g.sc36.191 supercontig_36 - View
Chenopodium quinoa AUR62027824 BHLH94: Transcription factor bHLH94 C_Quinoa_Scaffold_3784 - View
Chenopodium quinoa AUR62018984 BHLH94: Transcription factor bHLH94 C_Quinoa_Scaffold_3876 - View
Capsella rubella Carub.0001s2202 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_2G029940 transcription factor bHLH96 chr2 - View
Daucus carota DCAR_008254 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_012876 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv13636 GWHABJS00000014 + View
Davidia involucrata Dinv44814 GWHABJS00000002 - View
Davidia involucrata Dinv08873 GWHABJS00000021 + View
Durio zibethinus Duzib116G0590 NW_019167949.1 + View
Durio zibethinus Duzib264G1158 NW_019167960.1 - View
Durio zibethinus Duzib093G1001 NW_019167937.1 - View
Erigeron canadensis ECA246G0790 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA232G1403 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.B00048 Chr06 + View
Erythranthe guttata Migut.H02320 scaffold_8 + View
Eutrema salsugineum Thhalv10009836m.g PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED scaffold_5 + View
Fragaria x ananassa FAN19G1557 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Fvb1-4 + View
Fragaria x ananassa FAN26G0878 PTHR11969//PTHR11969:SF22 - MAX DIMERIZATION, MAD // TRANSCRIPTION FACTOR BHLH71-RELATED Fvb1-2 + View
Fragaria x ananassa FAN23G2760 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Fvb1-3 + View
Fragaria x ananassa FAN04G3083 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Fvb5-4 + View
Fragaria x ananassa FAN08G1343 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN18G3673 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria x ananassa FAN13G0981 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria vesca FvH4_1g20160 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Fvb1 + View
Fragaria vesca FvH4_5g36240 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Fvb5 + View
Gossypium hirsutum Gohir.A05G222800 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.D05G225500 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED D05 + View
Gossypium hirsutum Gohir.A02G130100 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED A02 - View
Gossypium hirsutum Gohir.D03G041000 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED D03 - View
Glycine max Glyma.14G178000 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Gm14 - View
Glycine max Glyma.06G100000 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Gm06 + View
Glycine max Glyma.02G210500 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Gm02 - View
Glycine max Glyma.04G098400 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Gm04 + View
Gossypium raimondii Gorai.009G233000 Chr09 + View
Gossypium raimondii Gorai.003G041800 Chr03 - View
Helianthus annuus HanXRQChr05g0163221 Probable basic helix-loop-helix (bHLH) DNA-binding superfamily protein HanXRQChr05 - View
Lupinus albus Lalb_Chr23g0270211 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Lalb_Chr23 + View
Lupinus albus Lalb_Chr05g0215951 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Lalb_Chr05 + View
Lupinus albus Lalb_Chr10g0102561 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Lalb_Chr10 - View
Lupinus albus Lalb_Chr08g0242231 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Lalb_Chr08 - View
Lotus japonicus Lj1g0000517 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED chr1 + View
Lotus japonicus Lj1g0027351 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED chr1 - View
Lonicera japonica Lj4A279T9 GWHAAZE00000004 + View
Lonicera japonica Lj4C94T4 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_9_74300 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_6_106080 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Lsat_1_v8_lg_6 - View
Magnolia biondii MBI02_g20471_MAGBIO AED:0.14 Chr02 - View
Magnolia biondii MBI06_g03312_MAGBIO AED:0.14 Chr06 - View
Malus domestica MD01G1037100 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr01 - View
Malus domestica MD08G1190500 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr08 - View
Malus domestica MD15G1377800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr15 - View
Manihot esculenta Manes.02G148500 Chromosome02 + View
Manihot esculenta Manes.12G129500 Chromosome12 + View
Manihot esculenta Manes.18G063000 Chromosome18 + View
Medicago truncatula Medtr3g099620 basic helix loop helix (BHLH) DNA-binding family protein chr3 - View
Medicago truncatula Medtr5g064950 basic helix loop helix (BHLH) DNA-binding family protein chr5 - View
Nelumbo nucifera Nn1g05475 chr1 - View
Nelumbo nucifera Nn5g29978 chr5 + View
Olea europaea Oeu000879.1 chr10 - View
Oryza sativa ssp. japonica Os02g0759000 Similar to DNA binding protein. chr02 - View
Oryza sativa ssp. japonica Os08g0483900 Helix-loop-helix DNA-binding domain containing protein. chr08 - View
Oryza sativa ssp. japonica Os09g0468700 Helix-loop-helix DNA-binding domain containing protein. chr09 + View
Oryza sativa ssp. japonica Os03g0188400 Basic helix-loop-helix (bHLH) protein, Defense to brown planthopper chr03 + View
Petunia axillaris Peaxi162Scf00139g00049 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00139 - View
Punica granatum PGR031G0229 NC_045127.1 - View
Prunus persica Prupe.6G194400 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Pp06 - View
Prunus persica Prupe.1G524500 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Pp01 - View
Pisum sativum Psat5g050120 Helix-loop-helix DNA-binding domain chr5LG3 + View
Pisum sativum Psat2g069320 Helix-loop-helix DNA-binding domain chr2LG1 + View
Populus trichocarpa Potri.002G101900 PTHR11969//PTHR11969:SF26 - MAX DIMERIZATION, MAD // TRANSCRIPTION FACTOR BHLH99 Chr02 - View
Populus trichocarpa Potri.005G071100 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Chr05 + View
Populus trichocarpa Potri.007G097600 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Chr07 - View
Populus trichocarpa Potri.003G093200 PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Chr03 - View
Phaseolus vulgaris Phvul.009G033800 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Chr09 - View
Phaseolus vulgaris Phvul.008G177500 PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD // SUBFAMILY NOT NAMED Chr08 - View
Quercus lobata QL06p047917 6 + View
Quercus lobata QL02p002208 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0112221 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr7g0238141 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim06G0076800 chr06 + View
Rhododendron simsii Rhsim10G0169100 chr10 - View
Rhododendron simsii Rhsim08G0013600 chr08 - View
Striga asiatica SGA_v2.0_scaffold195G40821 scaffold195 - View
Striga asiatica SGA_v2.0_scaffold45G17269 scaffold45 + View
Salvia bowleyana SalBow3G0906 GWHASIU00000006 + View
Salvia bowleyana SalBow3G0315 GWHASIU00000006 + View
Salix brachista Sabra07G0080900 GWHAAZH00000007 - View
Salix brachista Sabra02G0079900 GWHAAZH00000002 - View
Salix brachista Sabra05G0058200 GWHAAZH00000005 + View
Simmondsia chinensis Sc01g0000890 GWHAASQ00000001 - View
Sechium edule Sed0023741 LG04 - View
Solanum lycopersicum Solyc04g074810.4 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1PPA1_ARTAN) SL4.0ch04 - View
Solanum lycopersicum Solyc11g010340.2 bHLH transcription factor 069 SL4.0ch11 - View
Solanum lycopersicum Solyc12g087850.3 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1PAJ2_ARTAN) SL4.0ch12 - View
Schrenkiella parvula Sp1g19970 PTHR11969//PTHR11969:SF22 - MAX DIMERIZATION, MAD // TRANSCRIPTION FACTOR BHLH71-RELATED ch1-1 - View
Solanum pennellii Sopen12g029890 hypothetical protein Spenn-ch12 - View
Solanum pennellii Sopen04g029770 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch04 - View
Solanum pennellii Sopen11g005120 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400002125 DNA binding protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400016145 Transcription factor bHLH96 ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400017766 DNA binding protein ST4.03ch12 - View
Selenicereus undatus Hund14098 Scaffold_33679 + View
Selenicereus undatus Hund26996 Scaffold_2055 - View
Selenicereus undatus Hund16883 Scaffold_33675 + View
Trochodendron aralioides TAR628G1560 group5 - View
Trochodendron aralioides TAR376G0452 group14 - View
Theobroma cacao Thecc.01G094800 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_1 + View
Theobroma cacao Thecc.08G064500 DNA binding protein Chromosome_8 - View
Tarenaya hassleriana THA.LOC104810637 transcription factor bHLH96 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104800137 transcription factor bHLH96-like NW_010969032.1 + View
Trifolium pratense TPR.G6351 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI74G0326 NC_052234.1 + View
Tripterygium wilfordii TWI53G1837 NC_052244.1 - View
Tripterygium wilfordii TWI12G0455 NC_052243.1 - View
Vaccinium macrocarpon vmacro21929 Similar to BHLH96: Transcription factor bHLH96 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12991 Similar to BHLH96: Transcription factor bHLH96 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1744 CM024073.1 + View
Vigna mungo VMungo1309G0398 CM024072.1 + View
Vanilla planifolia HPP92_016762 BHLH transcription factor *** CM028157.1 + View
Vitis vinifera GSVIVG01009097001 chr18 - View
Zea mays Zm00001eb255490 Zm00001e015903 BHLH transcription factor Transcription factor bHLH99 5 - View
Zea mays Zm00001eb101190 Zm00001e009989 BHLH transcription factor DNA binding protein 2 + View
Zea mays Zm00001eb315610 Zm00001e034422 DNA binding protein 7 + View