Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0007017 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Nicotiana sylvestris] Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aquilegia oxysepala Aqoxy2G01560 CHR02 + View
Capsicum annuum CAN.G219.73 PGAv.1.6.scaffold219 + View
Fragaria vesca FvH4_7g01741 PF02892//PF05699//PF14372 - BED zinc finger (zf-BED) // hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) // Domain of unknown function (DUF4413) (DUF4413) Fvb7 + View
Magnolia biondii MBI15_g42948_MAGBIO AED:0.35 Chr15 - View
Papaver somniferum PSO017G1296 NC_039362.1 + View
Solanum pennellii Sopen07g015380 Putative AC transposase (ORFA) - Zea mays (Maize), transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. | BED zinc finger , hAT family dimerisation domain | CONTAINS InterPro DOMAIN/s: HAT dimerisation , Zinc finger, BED-type predicted | BEST Arabidopsis thaliana protein match is: BED zinc finger , hAT family dimerisation domain Spenn-ch07 + View