Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023739 PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Pyrus x bretschneideri] Contig229 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G6370 LG-2 + View
Aethionema arabicum Aa31LG1G3360 LG-1 + View
Actinidia chinensis Actinidia03444 Lachesis_group27 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.BTC05T PTHR10485//PTHR10485:SF0//PTHR24015//PTHR24015:SF417 - MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17 // AT05822P-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.16TXUG PTHR12176//PTHR12176:SF18//PTHR12444//PTHR12444:SF3 - UNCHARACTERIZED // METHYLTRANSFERASE-LIKE PROTEIN 13 // UNCHARACTERIZED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.73FGCJ PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 41202 Blast hits to 13044 proteins in 247 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 129%3B Fungi - 58%3B Plants - 40527%3B Viruses - 0%3B Other Eukaryotes - 488 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB03g15909 ChrB03 - View
Brassica rapa BraSC36t46026Z Brapa_scaffold_36 + View
Cicer arietinum L. Ca_16955_v3 Ca_LG5_v3 - View
Cicer arietinum L. Ca_17043_v3 Ca_LG5_v3 + View
Corylus avellana Haze_25268 Similar to PCMP-E76: Pentatricopeptide repeat-containing protein At2g13600 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc07_g18750 Putative Pentatricopeptide repeat-containing protein At4g02750 chr7 - View
Carya illinoinensis CiPaw.13G136900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr13 - View
Carya illinoinensis CiPaw.03G120000 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr03 - View
Carica papaya Cpa.g.sc42.171 supercontig_42 - View
Cucumis sativus L. CsaV3_5G039380 Pentatricopeptide repeat-containing protein chr5 + View
Daucus carota DCAR_001204 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv07102 GWHABJS00000014 - View
Durio zibethinus Duzib041G0254 NW_019167826.1 + View
Eucalyptus grandis Eucgr.J01294 Chr08 - View
Eutrema salsugineum Thhalv10018483m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_9 + View
Eutrema salsugineum Thhalv10005512m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_6 + View
Fragaria x ananassa FAN26G1766 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-2 - View
Glycine max Glyma.08G006700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm08 - View
Glycine max Glyma.04G211600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm04 - View
Glycine max Glyma.06G161600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 + View
Glycine max Glyma.06G154600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 + View
Lupinus albus Lalb_Chr25g0283601 PF12854//PF13041//PF13812 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lalb_Chr25 + View
Lupinus albus Lalb_Chr11g0069111 PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Lalb_Chr11 - View
Lotus japonicus Lj1g0020180 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr1 - View
Lonicera japonica Lj4P859T26 GWHAAZE00000004 - View
Lonicera japonica Lj2P604T17 GWHAAZE00000002 + View
Nelumbo nucifera Nn1g05154 chr1 - View
Olea europaea Oeu058294.1 chr18 - View
Punica granatum PGR042G1119 NC_045130.1 + View
Populus trichocarpa Potri.007G104700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr07 + View
Populus trichocarpa Potri.005G074000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr05 - View
Phaseolus vulgaris Phvul.009G155900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 - View
Quercus lobata QL10p043073 10 - View
Quercus lobata QL09p036064 9 - View
Rosa chinensis RcHm_v2.0_Chr2g0124091 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim10G0150000 chr10 - View
Salix brachista Sabra07G0085700 GWHAAZH00000007 + View
Solanum lycopersicum Solyc06g060050.1 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3C785_CAPCH) SL4.0ch06 + View
Schrenkiella parvula Sp2g15190 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch2-4 - View
Solanum pennellii Sopen04g022860 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch04 - View
Trochodendron aralioides TAR625G1265 group4 - View
Trochodendron aralioides TAR625G1252 group4 + View
Theobroma cacao Thecc.01G134600 Uncharacterized protein Chromosome_1 - View
Tripterygium wilfordii TWI79G0835 NC_052238.1 - View
Vaccinium macrocarpon vmacro18646 Similar to DOT4: Pentatricopeptide repeat-containing protein DOT4, chloroplastic (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0234 CM024069.1 - View