Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000819 unnamed protein product [Coffea canephora] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G12100 LG-3 + View
Aethionema arabicum Aa31LG10G550 LG-10 + View
Acer truncatum Atru.chr2.3893 chr2 + View
Actinidia chinensis Actinidia30354 Lachesis_group10 + View
Actinidia chinensis Actinidia10592 Lachesis_group19 - View
Arabidopsis lyrata AL1G63750 scaffold_1 - View
Arabidopsis lyrata AL8G31820 scaffold_8 + View
Avicennia marina MSTRG.16134 ScioBoG_19538_HRSCAF_19626 - View
Aquilegia oxysepala Aqoxy4G02263 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z3ZGEB PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT5G56190 Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2)%3B Has 22501 Blast hits to 10717 proteins in 548 species: Archae - 84%3B Bacteria - 7160%3B Metazoa - 5614%3B Fungi - 4737%3B Plants - 1943%3B Viruses - 0%3B Other Eukaryotes - 2963 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G55680 Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2)%3B Has 20114 Blast hits to 9589 proteins in 506 species: Archae - 80%3B Bacteria - 6727%3B Metazoa - 4776%3B Fungi - 4188%3B Plants - 1687%3B Viruses - 0%3B Other Eukaryotes - 2656 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT3G13340 Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1)%3B Has 21298 Blast hits to 10067 proteins in 523 species: Archae - 80%3B Bacteria - 6953%3B Metazoa - 5235%3B Fungi - 4425%3B Plants - 1789%3B Viruses - 0%3B Other Eukaryotes - 2816 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: CUL4 RING ubiquitin ligase complex%2C heterotrimeric G-protein complex%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1). Chr3 + View
Brassica carinata BcaB05g22248 ChrB05 + View
Brassica carinata BcaC04g20135 ChrC04 + View
Brassica carinata BcaB08g35983 ChrB08 - View
Brassica napus A02p09310 A02 - View
Brassica napus A10p13420 A10 + View
Brassica napus C02p15440 C02 - View
Brassica napus C09p47420 C09 + View
Brassica napus A03p38150 A03 + View
Brassica oleracea BolC9t57598H C9 + View
Brassica rapa BraA02t05993Z A02 - View
Brassica rapa BraA03t12968Z A03 + View
Brassica rapa BraA08t32096Z A08 + View
Brassica rapa BraA10t43445Z A10 + View
Cicer arietinum L. Ca_14140_v3 Ca_LG5_v3 - View
Coffea canephora Cc05_g15680 Putative Uncharacterized WD repeat-containing protein C2A9.03 chr5 + View
Citrus clementina Ciclev10008133m.g scaffold_1 + View
Carpinus fangiana Cfa016958 Cfa07 + View
Cardamine hirsuta CARHR234030 WD-repeat protein-like Chr7 - View
Cardamine hirsuta CARHR269590 WD-repeat protein-like Chr8 + View
Carya illinoinensis CiPaw.11G210400 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Chr11 + View
Carya illinoinensis CiPaw.12G142400 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Chr12 + View
Corchorus olitorius COL.COLO4_07786 hypothetical protein AWUE01013457.1 + View
Carica papaya Cpa.g.sc12.70 supercontig_12 - View
Chenopodium quinoa AUR62017176 SPBC2A9.03: Uncharacterized WD repeat-containing protein C2A9.03 C_Quinoa_Scaffold_3787 - View
Capsella rubella Carub.0008s1651 scaffold_8 + View
Daucus carota DCAR_017609 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_013759 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv40913 GWHABJS00000013 - View
Davidia involucrata Dinv19645 GWHABJS00000001 + View
Durio zibethinus Duzib213G0843 NW_019167993.1 - View
Durio zibethinus Duzib170G0833 NW_019167871.1 - View
Durio zibethinus Duzib268G0549 NW_019168270.1 - View
Erigeron canadensis ECA246G1113 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.F03647 Chr06 - View
Erythranthe guttata Migut.H01715 scaffold_8 - View
Erythranthe guttata Migut.M01584 scaffold_13 - View
Eutrema salsugineum Thhalv10013539m.g PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED scaffold_2 - View
Fragaria x ananassa FAN16G2420 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN11G1196 PTHR22847//PTHR22847:SF482 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb3-4 - View
Fragaria x ananassa FAN21G0922 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria x ananassa FAN25G0322 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria vesca FvH4_3g41630 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb3 - View
Gossypium hirsutum Gohir.A04G001200 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED A04 - View
Gossypium hirsutum Gohir.D05G388100 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED D05 + View
Glycine max Glyma.04G112700 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Gm04 + View
Gossypium raimondii Gorai.009G454700 Chr09 + View
Lotus japonicus Lj3g0001117 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj1A900G24 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_115500 Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_5_441 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 + View
Magnolia biondii MBI14_g12736_MAGBIO AED:0.13 Chr14 - View
Magnolia biondii MBI15_g47074_MAGBIO AED:0.35 Chr15 - View
Malus domestica MD03G1042700 Transducin/WD40 repeat-like superfamily protein Chr03 + View
Malus domestica MD11G1044000 Transducin/WD40 repeat-like superfamily protein Chr11 + View
Medicago truncatula Medtr3g010010 transducin/WD40 repeat protein chr3 - View
Nelumbo nucifera Nn1g07636 chr1 - View
Nicotiana tabacum Nitab4.5_0001622g0110 WD40 repeat, WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain Nitab4.5_0001622 + View
Olea europaea Oeu006266.4 chr6 - View
Oryza sativa ssp. japonica Os08g0497600 WD40 subfamily protein, Salt stress chr08 + View
Petunia axillaris Peaxi162Scf00232g00615 Transducin/WD40 repeat-like superfamily protein Peaxi162Scf00232 + View
Prunus persica Prupe.6G034200 Pp06 + View
Pisum sativum Psat5g231760 WD domain + G-beta repeat chr5LG3 + View
Papaver somniferum PSO782G3171 NC_039365.1 - View
Populus trichocarpa Potri.011G168600 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Chr11 + View
Populus trichocarpa Potri.001G471800 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.005G003900 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Chr05 + View
Quercus lobata QL08p000557 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0074671 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim06G0234900 chr06 + View
Rhododendron simsii Rhsim04G0007600 chr04 - View
Striga asiatica SGA_v2.0_scaffold11G05959 scaffold11 + View
Salix brachista Sabra11G0138100 GWHAAZH00000011 - View
Salix brachista Sabra16G0320300 GWHAAZH00000016 + View
Simmondsia chinensis Sc03g0011760 GWHAASQ00000003 + View
Solanum lycopersicum Solyc07g066130.1 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** Q9C5N4_ARATH) SL4.0ch07 + View
Solanum lycopersicum Solyc10g005730.3 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** Q9C5N4_ARATH) SL4.0ch10 - View
Schrenkiella parvula Sp7g24380 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED ch7-4 - View
Schrenkiella parvula Sp6g18040 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED ch6-6 + View
Schrenkiella parvula Sp1g41290 PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED ch1-2 - View
Solanum pennellii Sopen07g034310 Transducin/WD40 repeat-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40 repeat 2 , WD40-repeat-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein . Spenn-ch07 + View
Solanum pennellii Sopen10g001700 Transducin/WD40 repeat-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40 repeat 2 , WD40-repeat-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein . Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400008689 WD-40 repeat family protein ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400022251 WD-repeat protein ST4.03ch07 + View
Trochodendron aralioides TAR627G0625 group6 + View
Trochodendron aralioides TAR624G0860 group9 - View
Trochodendron aralioides TAR626G1616 group3 + View
Theobroma cacao Thecc.07G001900 Transducin/WD40 repeat-like superfamily protein Chromosome_7 - View
Tarenaya hassleriana THA.LOC104810301 uncharacterized WD repeat-containing protein C2A9.03-like NW_010965216.1 + View
Tarenaya hassleriana THA.LOC104822704 uncharacterized WD repeat-containing protein C2A9.03-like NW_010966725.1 - View
Tarenaya hassleriana THA.LOC104811700 uncharacterized WD repeat-containing protein C2A9.03 NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104815680 uncharacterized WD repeat-containing protein C2A9.03-like NW_010965696.1 - View
Trifolium pratense TPR.G16716 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI38G1014 NC_052252.1 + View
Tripterygium wilfordii TWI38G2008 NC_052252.1 - View
Tripterygium wilfordii TWI39G0511 NC_052250.1 - View
Vaccinium macrocarpon vmacro11640 Similar to SPBC2A9.03: Uncharacterized WD repeat-containing protein C2A9.03 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09800 Similar to SPBC2A9.03: Uncharacterized WD repeat-containing protein C2A9.03 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G1730 CM024079.1 - View
Vitis vinifera GSVIVG01014841001 chr19 + View
Zea mays Zm00001eb253050 Zm00001e015681 Transducin/WD40 repeat-like superfamily protein 5 - View
Zea mays Zm00001eb033950 Zm00001e003440 Transducin/WD40 repeat-like superfamily protein 1 - View