Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049383 hypothetical protein POPTR_0002s07020g [Populus trichocarpa] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.2195 chr13 - View
Actinidia chinensis Actinidia17802 Lachesis_group26 + View
Actinidia chinensis Actinidia10658 Lachesis_group28 + View
Avicennia marina MSTRG.24211 ScioBoG_4088_HRSCAF_4107 + View
Avicennia marina MSTRG.25317 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.1358 ScioBoG_102833_HRSCAF_103052 - View
Amaranthus hybridus Ah.05g167800 Transcription factor VIP1 (Protein SULPHATE UTILIZATION EFFICIENCY 3) (VirE2-interacting protein 1) (AtVIP1) (bZIP transcription factor 51) (AtbZIP51) (bZIP protein 51) AmaHy_arrow1_Scaffold_5 - View
Aquilegia oxysepala Aqoxy5G02127 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1B2Z8C PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K23Z11 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT1G43700 VIRE2-interacting protein 1 Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half%2C and interacts with histone H2A via it carboxyl half. Involved in osmosensory response. VIRE2-interacting protein 1 (VIP1)%3B FUNCTIONS IN: protein binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: cellular response to sulfate starvation%2C sulfate transport%2C DNA mediated transformation%2C nuclear import%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827)%2C Basic leucine zipper (InterPro:IPR011700)%3B BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1)%3B Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0%3B Bacteria - 51%3B Metazoa - 59%3B Fungi - 47%3B Plants - 1254%3B Viruses - 0%3B Other Eukaryotes - 39 (source: NCBI BLink). Chr1 + View
Brassica napus A08p23960 A08 + View
Beta vulgaris EL10Ac1g01522 PTHR13690//PTHR13690:SF86 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR VIP1 Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G175.6 PGAv.1.6.scaffold175 - View
Cannabis sativa CANSAT25G0716 NC_044370.1 - View
Corylus avellana Haze_17743 Similar to VIP1: Transcription factor VIP1 (Arabidopsis thaliana OX%3D3702) 7 - View
Citrus clementina Ciclev10001715m.g scaffold_5 - View
Carpinus fangiana Cfa018333 Cfa07 + View
Carya illinoinensis CiPaw.16G014000 PTHR13690//PTHR13690:SF86 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR VIP1 Chr16 + View
Carya illinoinensis CiPaw.15G017200 PTHR13690//PTHR13690:SF86 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR VIP1 Chr15 + View
Citrullus lanatus ClCG08G006930 BZIP transcription factor family protein CG_Chr08 - View
Carica papaya Cpa.g.sc21.185 supercontig_21 - View
Chenopodium quinoa AUR62026729 VIP1: Transcription factor VIP1 C_Quinoa_Scaffold_2081 + View
Chenopodium quinoa AUR62013552 Protein of unknown function C_Quinoa_Scaffold_1611 - View
Capsella rubella Carub.0001s3472 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 scaffold_1 + View
Cucumis sativus L. CsaV3_6G005320 transcription factor VIP1-like chr6 + View
Daucus carota DCAR_001125 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_014428 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv41094 GWHABJS00000002 - View
Durio zibethinus Duzib093G0443 NW_019167937.1 - View
Erigeron canadensis ECA246G4596 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.F02715 Chr06 + View
Erythranthe guttata Migut.N03219 scaffold_14 - View
Erythranthe guttata Migut.C01007 scaffold_3 + View
Fragaria x ananassa FAN20G0383 KOG4571 - Activating transcription factor 4 Fvb2-3 - View
Gossypium hirsutum Gohir.A02G064500 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 A02 + View
Gossypium hirsutum Gohir.D02G070600 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 D02 - View
Glycine max Glyma.10G226000 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 Gm10 + View
Glycine max Glyma.16G168400 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 Gm16 + View
Glycine max Glyma.02G082800 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 Gm02 + View
Gossypium raimondii Gorai.005G079600 Chr05 - View
Lupinus albus Lalb_Chr03g0035231 Lalb_Chr03 - View
Lotus japonicus Lj2g0016043 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 chr2 - View
Lotus japonicus Lj5g0000973 PTHR13690//PTHR13690:SF86 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR VIP1 chr5 - View
Lonicera japonica Lj7A371G48 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_1_8440 Lsat_1_v8_lg_1 + View
Malus domestica MD05G1022300 VIRE2-interacting protein 1 Chr05 - View
Malus domestica MD10G1023800 VIRE2-interacting protein 1 Chr10 - View
Manihot esculenta Manes.02G178100 Chromosome02 - View
Manihot esculenta Manes.18G090516 Chromosome18 - View
Medicago truncatula Medtr1g099030 basic region leucine zipper protein chr1 + View
Nelumbo nucifera Nn5g28705 chr5 + View
Oryza sativa ssp. japonica Os12g0162500 Similar to BZIP-like protein. chr12 + View
Prunus persica Prupe.8G026300 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 Pp08 - View
Pisum sativum Psat6g193760 Unknown gene chr6LG2 + View
Populus trichocarpa Potri.005G190700 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 Chr05 - View
Populus trichocarpa Potri.002G069500 PTHR13690:SF86 - TRANSCRIPTION FACTOR VIP1 Chr02 + View
Phaseolus vulgaris Phvul.007G078900 Chr07 - View
Quercus lobata QL02p024154 CM012294 + View
Striga asiatica SGA_v2.0_scaffold48G17974 scaffold48 + View
Salix brachista Sabra05G0145700 GWHAAZH00000005 - View
Simmondsia chinensis Sc02g0004190 GWHAASQ00000002 + View
Sechium edule Sed0007084 LG03 - View
Sechium edule Sed0019060 LG11 - View
Solanum lycopersicum Solyc04g071160.3 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *-* Q8H1F0_ARATH) SL4.0ch04 - View
Solanum pennellii Sopen04g027110 Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. | VIRE2-interacting protein 1 (VIP1) | FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor , Basic leucine zipper | BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400000799 BZIP transcriptional activator RSG ST4.03ch04 - View
Selenicereus undatus Hund26704 Scaffold_2055 + View
Trochodendron aralioides TAR381G1037 group11 + View
Trochodendron aralioides TAR625G1363 group4 - View
Theobroma cacao Thecc.08G149400 VIRE2-interacting protein 1 Chromosome_8 - View
Tarenaya hassleriana THA.LOC104806854 transcription factor VIP1 NW_010962392.1 - View
Tripterygium wilfordii TWI32G0434 NC_052254.1 + View
Tripterygium wilfordii TWI60G0773 NC_052246.1 - View
Vigna mungo VMungo0720G3142 CM024071.1 + View