Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr5.894 | chr5 | + | View | |
Actinidia chinensis | Actinidia06397 | Lachesis_group24 | - | View | |
Actinidia chinensis | Actinidia21351 | Lachesis_group19 | - | View | |
Arabidopsis lyrata | AL4G46570 | scaffold_4 | + | View | |
Aquilegia oxysepala | Aqoxy5G02784 | CHR05 | - | View | |
Arabidopsis thaliana | AT2G47070 | squamosa promoter binding protein-like 1 member of SPL gene family%2C encodes DNA binding proteins and putative transcription factors. All have the SBP-box%2C which encodes the SBP-domain%2C required for and sufficient for interaction with DNA. squamosa promoter binding protein-like 1 (SPL1)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C SBP-box (InterPro:IPR004333)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1)%3B Has 940 Blast hits to 885 proteins in 46 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 930%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink). | Chr2 | + | View |
Brassica oleracea | BolC4t21727H | C4 | - | View | |
Cannabis sativa | CANSAT78G0427 | NC_044376.1 | - | View | |
Corylus avellana | Haze_05125 | Similar to SPL1: Squamosa promoter-binding-like protein 1 (Arabidopsis thaliana OX%3D3702) | 2 | - | View |
Coffea canephora | Cc01_g21870 | Squamosa promoter-binding-like protein 1 | chr1 | + | View |
Cardamine hirsuta | CARHR142430 | squamosa promoter binding protein-like 1 | Chr4 | + | View |
Carya illinoinensis | CiPaw.08G084300 | PTHR31251:SF8 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | Chr08 | + | View |
Carya illinoinensis | CiPaw.08G078500 | PTHR31251:SF3 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14-RELATED | Chr08 | + | View |
Carya illinoinensis | CiPaw.07G123900 | PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | Chr07 | - | View |
Capsella rubella | Carub.0004s2981 | PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | scaffold_4 | + | View |
Durio zibethinus | Duzib138G1731 | NW_019167893.1 | + | View | |
Lotus japonicus | Lj1g0013691 | PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | chr1 | - | View |
Lotus japonicus | Lj5g0024810 | PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | chr5 | - | View |
Medicago truncatula | Medtr7g110320 | squamosa promoter-binding-like protein | chr7 | - | View |
Nelumbo nucifera | Nn3g21895 | chr3 | - | View | |
Populus trichocarpa | Potri.002G188700 | PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | Chr02 | + | View |
Quercus lobata | QL12p034448 | 12 | - | View | |
Rhododendron simsii | Rhsim13G0000500 | chr13 | + | View | |
Salix brachista | Sabra02G0166600 | GWHAAZH00000002 | - | View | |
Trifolium pratense | TPR.G4116 | Tp57577_TGAC_v2_LG6 | + | View | |
Vaccinium macrocarpon | vmacro02366 | Similar to SPL1: Squamosa promoter-binding-like protein 1 (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vitis vinifera | GSVIVG01028208001 | chr7 | - | View |