Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0007805 Serine hydroxymethyltransferase 1 [Morus notabilis] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G3640 LG-9 + View
Acer truncatum Atru.chr4.1577 chr4 + View
Actinidia chinensis Actinidia21260 Lachesis_group0 - View
Actinidia chinensis Actinidia35840 Lachesis_group8 - View
Avicennia marina MSTRG.4246 ScioBoG_102837_HRSCAF_103074 - View
Avicennia marina MSTRG.9795 ScioBoG_12795_HRSCAF_12848 + View
Amaranthus hybridus Ah.13g077950 Serine hydroxymethyltransferase 4 (AtSHMT4) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 4) (Serine methylase 4) AmaHy_arrow1_Scaffold_13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9D5E6Q PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT4G13890 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein EMBRYO SAC DEVELOPMENT ARREST 37 (EDA36)%3B FUNCTIONS IN: pyridoxal phosphate binding%2C glycine hydroxymethyltransferase activity%2C catalytic activity%3B INVOLVED IN: glycine metabolic process%2C polar nucleus fusion%2C L-serine metabolic process%2C pollen development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase%2C major domain (InterPro:IPR015424)%2C Serine hydroxymethyltransferase%2C pyridoxal phosphate binding site (InterPro:IPR019798)%2C Pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1 (InterPro:IPR015421)%2C Serine hydroxymethyltransferase (InterPro:IPR001085)%3B BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 4 (TAIR:AT4G13930.1)%3B Has 11625 Blast hits to 11598 proteins in 2846 species: Archae - 258%3B Bacteria - 6397%3B Metazoa - 338%3B Fungi - 287%3B Plants - 371%3B Viruses - 6%3B Other Eukaryotes - 3968 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0561G258 AmTr_v1.0_scaffold00013 + View
Brassica carinata BcaB02g08644 ChrB02 + View
Brassica carinata BcaB04g17637 ChrB04 + View
Brassica carinata BcaC02g09379 ChrC02 + View
Brassica napus A04p08230 A04 + View
Brassica napus C04p41940 C04 + View
Beta vulgaris EL10Ac3g07453 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Chr3_EL10_PGA_scaffold7 + View
Cicer arietinum L. Ca_16408_v3 Ca_LG5_v3 - View
Cicer arietinum L. Ca_17984_v3 Ca_LG6_v3 - View
Corylus avellana Haze_11654 Similar to SHM4: Serine hydroxymethyltransferase 4 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g08480 Serine hydroxymethyltransferase 1 chr3 - View
Citrus clementina Ciclev10004902m.g scaffold_9 + View
Carpinus fangiana Cfa014962 Cfa06 - View
Cardamine hirsuta CARHR219820 Serine hydroxymethyltransferase Chr7 - View
Carya illinoinensis CiPaw.01G116700 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Chr01 + View
Carya illinoinensis CiPaw.02G064400 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Chr02 + View
Chenopodium quinoa AUR62020864 SHM4: Serine hydroxymethyltransferase 4 C_Quinoa_Scaffold_4257 - View
Capsella rubella Carub.0007s2854 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED scaffold_7 + View
Davidia involucrata Dinv27199 GWHABJS00000014 - View
Davidia involucrata Dinv38167 GWHABJS00000016 - View
Durio zibethinus Duzib151G0931 NW_019167904.1 + View
Durio zibethinus Duzib268G0762 NW_019168270.1 + View
Eucalyptus grandis Eucgr.H02679 Chr08 - View
Erythranthe guttata Migut.N00420 scaffold_14 - View
Erythranthe guttata Migut.G00772 scaffold_7 - View
Eutrema salsugineum Thhalv10025102m.g PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED scaffold_1 + View
Fragaria x ananassa FAN17G0088 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Fvb4-2 - View
Fragaria x ananassa FAN12G0437 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Fvb4-3 + View
Fragaria x ananassa FAN22G0801 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN07G1122 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria vesca FvH4_4g13290 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.D10G138600 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED D10 - View
Gossypium hirsutum Gohir.D09G200100 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED D09 - View
Gossypium hirsutum Gohir.A09G206500 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED A09 - View
Glycine max Glyma.05G152100 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Gm05 + View
Gossypium raimondii Gorai.011G153900 Chr11 - View
Gossypium raimondii Gorai.006G223800 Chr06 - View
Lupinus albus Lalb_Chr12g0205621 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Lalb_Chr12 - View
Lotus japonicus Lj4g0014077 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED chr4 - View
Lotus japonicus Lj6g0000479 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED chr6 + View
Lactuca sativa Lsat_1_v5_gn_2_47601 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_2 - View
Manihot esculenta Manes.03G144000 Chromosome03 + View
Manihot esculenta Manes.15G056800 Chromosome15 - View
Medicago truncatula Medtr3g084310 serine transhydroxymethyltransferase chr3 - View
Olea europaea Oeu002925.1 chr11 + View
Petunia axillaris Peaxi162Scf00652g00013 AP2/B3 transcription factor family protein Peaxi162Scf00652 + View
Petunia axillaris Peaxi162Scf00423g00512 serine hydroxymethyltransferase 4 Peaxi162Scf00423 - View
Punica granatum PGR083G2505 NC_045133.1 + View
Prunus persica Prupe.1G165100 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Pp01 - View
Pisum sativum Psat5g100000 Serine hydroxymethyltransferase chr5LG3 + View
Papaver somniferum PSO017G7237 NC_039362.1 + View
Populus trichocarpa Potri.017G059300 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Chr17 - View
Populus trichocarpa Potri.001G320400 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Chr01 - View
Phaseolus vulgaris Phvul.001G266600 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.003G051100 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED Chr03 - View
Quercus lobata QL06p025780 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0413581 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim02G0062000 chr02 - View
Salvia bowleyana SalBow8G4593 GWHASIU00000004 - View
Salix brachista Sabra16G0203000 GWHAAZH00000016 - View
Salix brachista Sabra17G0052900 GWHAAZH00000017 - View
Simmondsia chinensis Sc13g0000430 GWHAASQ00000013 - View
Simmondsia chinensis Sc19g0007370 GWHAASQ00000019 - View
Sechium edule Sed0007209 LG04 + View
Sechium edule Sed0006300 LG09 - View
Schrenkiella parvula Sp7g11730 PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE // SUBFAMILY NOT NAMED ch7-4 - View
Solanum pennellii Sopen05g032280 Encodes a serine hydroxymethyltransferase maximally expressed in root | serine hydroxymethyltransferase 4 (SHM4) | FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity | INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process | LOCATED IN: cytosol, plasma membrane, membrane | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: seedling growth, seed development stages | CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain , Serine hydroxymethyltransferase, pyridoxal phosphate binding site , Pyridoxal phosphate-dependent transferase, major region, subdomain 1 , Serine hydroxymethyltransferase | BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400015745 Serine hydroxymethyltransferase ST4.03ch05 - View
Selenicereus undatus Hund24422 Scaffold_3410 - View
Selenicereus undatus Hund19010 Scaffold_33673 - View
Trochodendron aralioides TAR362G0432 group17 - View
Theobroma cacao Thecc.04G194900 Serine hydroxymethyltransferase 4 Chromosome_4 + View
Trifolium pratense TPR.G11963 Tp57577_TGAC_v2_LG3 - View
Vaccinium macrocarpon vmacro15567 Similar to SHM4: Serine hydroxymethyltransferase 4 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View