Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr7.108 | chr7 | + | View | |
Actinidia chinensis | Actinidia04293 | Lachesis_group1 | + | View | |
Actinidia chinensis | Actinidia38332 | Lachesis_group15 | - | View | |
Arabidopsis lyrata | AL7G21130 | scaffold_7 | + | View | |
Avicennia marina | MSTRG.10687 | ScioBoG_13798_HRSCAF_13862 | + | View | |
Avicennia marina | MSTRG.26282 | ScioBoG_52287_HRSCAF_52434 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.FHD422 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arabidopsis thaliana | AT4G30950 | fatty acid desaturase 6 Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids%2C sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition. fatty acid desaturase 6 (FAD6)%3B FUNCTIONS IN: omega-6 fatty acid desaturase activity%3B INVOLVED IN: photoinhibition%2C fatty acid biosynthetic process%3B LOCATED IN: chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1)%3B Has 3227 Blast hits to 3218 proteins in 733 species: Archae - 0%3B Bacteria - 1371%3B Metazoa - 67%3B Fungi - 380%3B Plants - 896%3B Viruses - 0%3B Other Eukaryotes - 513 (source: NCBI BLink). | Chr4 | - | View |
Amborella trichopoda | ATR0739G067 | AmTr_v1.0_scaffold00065 | + | View | |
Brassica carinata | BcaC01g01126 | ChrC01 | + | View | |
Brassica carinata | BcaC09g51881 | ChrC09 | - | View | |
Brassica napus | A08p19000 | A08 | + | View | |
Brassica napus | C01p08000 | C01 | + | View | |
Brassica napus | C03p88420 | C03 | + | View | |
Brassica oleracea | BolC1t00789H | C1 | + | View | |
Brassica rapa | BraA01t00673Z | A01 | + | View | |
Cannabis sativa | CANSAT11G1451 | NC_044377.1 | - | View | |
Cicer arietinum L. | Ca_21120_v3 | Ca_LG7_v3 | + | View | |
Corylus avellana | Haze_19216 | Similar to Omega-6 fatty acid desaturase, chloroplastic (Brassica napus OX%3D3708) | 7 | - | View |
Coffea canephora | Cc06_g15100 | Omega-6 fatty acid desaturase, chloroplastic | chr6 | - | View |
Ceratophyllum demersum | CDE01G0289 | 11 | + | View | |
Carpinus fangiana | Cfa020832 | Cfa08 | - | View | |
Cardamine hirsuta | CARHR238850 | fatty acid desaturase 6 | Chr7 | - | View |
Carya illinoinensis | CiPaw.16G113600 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Chr16 | - | View |
Citrullus lanatus | ClCG06G012350 | Omega-6 fatty acid desaturase | CG_Chr06 | + | View |
Cucumis melo | MELO3C010229.2 | omega-6 fatty acid desaturase, chloroplastic | chr02 | - | View |
Corchorus olitorius | COL.COLO4_18797 | Fatty acid desaturase%2C type 1 | AWUE01016503.1 | + | View |
Carica papaya | Cpa.g.sc46.146 | supercontig_46 | + | View | |
Capsella rubella | Carub.0007s0959 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | scaffold_7 | + | View |
Cucumis sativus L. | CsaV3_1G028900 | Fatty-acid desaturase | chr1 | + | View |
Daucus carota | DCAR_019387 | hypothetical protein | DCARv2_Chr5 | + | View |
Davidia involucrata | Dinv42863 | GWHABJS00000085 | - | View | |
Davidia involucrata | Dinv41386 | GWHABJS00000013 | - | View | |
Davidia involucrata | Dinv43237 | GWHABJS00000085 | + | View | |
Durio zibethinus | Duzib168G0132 | NW_019168159.1 | - | View | |
Durio zibethinus | Duzib150G0627 | NW_019167882.1 | - | View | |
Erigeron canadensis | ECA234G1308 | Conyza_canadensis_scaffold:4 | + | View | |
Eucalyptus grandis | Eucgr.C02571 | Chr03 | - | View | |
Erythranthe guttata | Migut.K00333 | scaffold_11 | - | View | |
Eutrema salsugineum | Thhalv10025201m.g | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | scaffold_1 | + | View |
Fragaria x ananassa | FAN26G2907 | PTHR32100:SF10 - OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC | Fvb1-2 | + | View |
Fragaria x ananassa | FAN28G1418 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Fvb1-1 | + | View |
Fragaria x ananassa | FAN23G0543 | PTHR32100//PTHR32100:SF10 - FAMILY NOT NAMED // OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC | Fvb1-3 | - | View |
Fragaria vesca | FvH4_1g01030 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Fvb1 | - | View |
Gossypium hirsutum | Gohir.D13G190400 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | D13 | - | View |
Gossypium hirsutum | Gohir.A13G184300 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | A13 | - | View |
Glycine max | Glyma.17G074400 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Gm17 | - | View |
Glycine max | Glyma.02G203300 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Gm02 | + | View |
Gossypium raimondii | Gorai.013G216300 | Chr13 | - | View | |
Helianthus annuus | HanXRQChr10g0313741 | Probable omega-6 fatty acid desaturase, chloroplastic | HanXRQChr10 | + | View |
Hydrangea macrophylla | Hma1.2p1_0028F.1_g017500 | Hma1.2p1_0028F.1 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0222F.1_g093420 | Hma1.2p1_0222F.1 | + | View | |
Lupinus albus | Lalb_Chr12g0198661 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Lalb_Chr12 | + | View |
Lupinus albus | Lalb_Chr08g0234121 | PTHR32100//PTHR32100:SF10 - FAMILY NOT NAMED // OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC | Lalb_Chr08 | + | View |
Lotus japonicus | Lj4g0000641 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | chr4 | - | View |
Lotus japonicus | Lj6g0016605 | 1.3.1.35 - Transferred entry: 1.14.19.22 | chr6 | - | View |
Lonicera japonica | Lj9C716G3 | GWHAAZE00000009 | + | View | |
Lonicera japonica | Lj7A458T46 | GWHAAZE00000007 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_5_91701 | Lsat_1_v8_lg_5 | - | View | |
Malus domestica | MD15G1152700 | fatty acid desaturase 6 | Chr15 | - | View |
Manihot esculenta | Manes.06G036500 | Chromosome06 | - | View | |
Medicago truncatula | Medtr4g130980 | fatty-acid desaturase | chr4 | - | View |
Nelumbo nucifera | Nn2g12345 | chr2 | + | View | |
Nelumbo nucifera | Nn8g39870 | chr8 | + | View | |
Punica granatum | PGR102G0847 | NC_045129.1 | + | View | |
Prunus persica | Prupe.7G261900 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Pp07 | + | View |
Populus trichocarpa | Potri.018G107700 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Chr18 | - | View |
Populus trichocarpa | Potri.006G185400 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Chr06 | - | View |
Phaseolus vulgaris | Phvul.003G156600 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | Chr03 | - | View |
Quercus lobata | QL02p093093 | CM012294 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0085771 | RcHm_v2.0_Chr2 | - | View | |
Rhododendron simsii | Rhsim01G0034400 | chr01 | - | View | |
Salvia bowleyana | SalBow1G4344 | GWHASIU00000001 | + | View | |
Salix brachista | Sabra06G0140900 | GWHAAZH00000006 | - | View | |
Sechium edule | Sed0002610 | LG08 | - | View | |
Sechium edule | Sed0000229 | LG12 | - | View | |
Solanum lycopersicum | Solyc07g005510.3 | Omega-6 fatty acid desaturase, chloroplastic (AHRD V3.3 *** A0A2G3BXG4_CAPCH) | SL4.0ch07 | + | View |
Schrenkiella parvula | Sp7g28820 | K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) | ch7-5 | - | View |
Solanum tuberosum | PGSC0003DMG400011135 | Plastidial delta-12 oleate desaturase | ST4.03ch07 | + | View |
Theobroma cacao | Thecc.09G031800 | Chromosome_9 | - | View | |
Tarenaya hassleriana | THA.LOC104803563 | omega-6 fatty acid desaturase%2C chloroplastic-like isoform X1 | NW_010971389.1 | - | View |
Tripterygium wilfordii | TWI34G0662 | NC_052235.1 | - | View | |
Tripterygium wilfordii | TWI32G0296 | NC_052254.1 | + | View | |
Vigna mungo | VMungo1215G0903 | CM024074.1 | + | View |