Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015568 Emb:CAB10253.1 isoform 1 [Theobroma cacao] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G3420 LG-5 + View
Acer truncatum Atru.chr5.1504 chr5 + View
Actinidia chinensis Actinidia23539 Lachesis_group3 + View
Actinidia chinensis Actinidia00795 Lachesis_group19 - View
Actinidia chinensis Actinidia40122 Lachesis_group22 - View
Arabidopsis lyrata AL7G41200 scaffold_7 + View
Arabidopsis lyrata AL5G46160 scaffold_5 + View
Arabidopsis lyrata AL8G16270 scaffold_8 + View
Avicennia marina MSTRG.4058 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.17459 ScioBoG_19834_HRSCAF_19925 - View
Avicennia marina MSTRG.24726 ScioBoG_4088_HRSCAF_4107 - View
Avicennia marina MSTRG.21872 ScioBoG_3008_HRSCAF_3015 + View
Avicennia marina MSTRG.18259 ScioBoG_22153_HRSCAF_22259 + View
Amaranthus hybridus Ah.11g050270 VAN3-binding protein (Protein FORKED 1) AmaHy_arrow1_Scaffold_11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WTKG8R PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MD1FPQ PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KV2ITS PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K5B77E PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT4G14740 auxin canalization protein (DUF828) FUNCTIONS IN: phosphoinositide binding%3B INVOLVED IN: signal transduction%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Pleckstrin-like%2C plant (InterPro:IPR013666)%2C Protein of unknown function DUF828 (InterPro:IPR008546)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT3G63300 FORKED 1 Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering%2C with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway. FORKED 1 (FKD1)%3B CONTAINS InterPro DOMAIN/s: Pleckstrin-like%2C plant (InterPro:IPR013666)%2C Protein of unknown function DUF828 (InterPro:IPR008546)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1)%3B Has 742 Blast hits to 348 proteins in 78 species: Archae - 0%3B Bacteria - 118%3B Metazoa - 127%3B Fungi - 51%3B Plants - 226%3B Viruses - 0%3B Other Eukaryotes - 220 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB02g08067 ChrB02 - View
Brassica carinata BcaC09g49202 ChrC09 + View
Brassica napus C01p41440 C01 - View
Brassica napus C04p29930 C04 - View
Brassica oleracea BolC4t24524H C4 - View
Brassica oleracea BolC1t04102H C1 - View
Beta vulgaris EL10Ac5g10506 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G433.11 PGAv.1.6.scaffold433 - View
Cannabis sativa CANSAT25G0724 NC_044370.1 + View
Cicer arietinum L. Ca_09734_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_08632_v3 Ca_LG3_v3 + View
Corylus avellana Haze_04658 Similar to VAB: VAN3-binding protein (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_11228 Similar to VAB: VAN3-binding protein (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc03_g04210 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region chr3 + View
Coffea canephora Cc01_g19100 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region chr1 - View
Citrus clementina Ciclev10019940m.g scaffold_3 - View
Citrus clementina Ciclev10004842m.g scaffold_9 - View
Carpinus fangiana Cfa006185 Cfa02 + View
Cardamine hirsuta CARHR291640 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region NSCAFB.271 - View
Cardamine hirsuta CARHR098670 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Chr3 + View
Cardamine hirsuta CARHR179560 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Chr6 + View
Cardamine hirsuta CARHR221220 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Chr7 - View
Carya illinoinensis CiPaw.02G121700 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G196000 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Chr01 - View
Carya illinoinensis CiPaw.07G088000 PF05703 - Auxin canalisation (Auxin_canalis) Chr07 - View
Citrullus lanatus ClCG05G004900 Ice binding protein, putative CG_Chr05 - View
Citrullus lanatus ClCG07G000440 Ice binding protein, putative CG_Chr07 + View
Cucumis melo MELO3C006503.2 VAN3-binding protein chr06 - View
Carica papaya Cpa.g.sc44.115 supercontig_44 + View
Carica papaya Cpa.g.sc52.111 supercontig_52 + View
Chenopodium quinoa AUR62011979 VAB: VAN3-binding protein C_Quinoa_Scaffold_2008 - View
Chenopodium quinoa AUR62032291 VAB: VAN3-binding protein C_Quinoa_Scaffold_1762 - View
Capsella rubella Carub.0007s2742 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_3G012940 VAN3-binding protein-like chr3 - View
Cucumis sativus L. CsaV3_2G013460 VAN3-binding protein isoform X2 chr2 - View
Daucus carota DCAR_002371 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_027240 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv14039 GWHABJS00000016 - View
Davidia involucrata Dinv22510 GWHABJS00000007 + View
Durio zibethinus Duzib138G1064 NW_019167893.1 + View
Durio zibethinus Duzib151G1183 NW_019167904.1 + View
Durio zibethinus Duzib212G0055 NW_019168026.1 - View
Durio zibethinus Duzib133G0521 NW_019167938.1 + View
Durio zibethinus Duzib211G0103 NW_019168049.1 + View
Durio zibethinus Duzib052G0778 NW_019167849.1 + View
Erigeron canadensis ECA236G4767 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA248G2934 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.K03331 Chr11 - View
Erythranthe guttata Migut.D00339 scaffold_4 + View
Eutrema salsugineum Thhalv10020762m.g PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED scaffold_13 - View
Eutrema salsugineum Thhalv10005918m.g PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED scaffold_19 - View
Eutrema salsugineum Thhalv10003209m.g PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED scaffold_17 + View
Fragaria x ananassa FAN24G2620 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Fvb2-2 + View
Fragaria x ananassa FAN15G0001 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Fvb2-4 - View
Fragaria x ananassa FAN20G1576 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Fvb2-3 + View
Fragaria vesca FvH4_2g23080 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Fvb2 - View
Gossypium hirsutum Gohir.A08G066700 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) A08 - View
Gossypium hirsutum Gohir.A09G218700 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED A09 + View
Gossypium hirsutum Gohir.A12G003000 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) A12 - View
Gossypium hirsutum Gohir.D12G002700 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) D12 - View
Glycine max Glyma.03G157000 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Gm03 + View
Glycine max Glyma.19G159200 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Gm19 + View
Glycine max Glyma.10G029300 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Gm10 + View
Gossypium raimondii Gorai.006G242000 Chr06 + View
Gossypium raimondii Gorai.008G002500 Chr08 - View
Gossypium raimondii Gorai.004G077500 Chr04 - View
Helianthus annuus HanXRQChr04g0113971 Probable FORKED 1 HanXRQChr04 - View
Lupinus albus Lalb_Chr21g0306361 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Lalb_Chr21 - View
Lupinus albus Lalb_Chr02g0142541 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Lalb_Chr02 - View
Lotus japonicus Lj5g0026883 PTHR31351//PTHR31351:SF4 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED chr5 + View
Lotus japonicus Lj1g0022849 PF08458 - Plant pleckstrin homology-like region (PH_2) chr1 - View
Lotus japonicus Lj5g0007657 PF08458 - Plant pleckstrin homology-like region (PH_2) chr5 - View
Lonicera japonica Lj2C1166T15 GWHAAZE00000002 - View
Lonicera japonica Lj3A728T54 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_5_184701 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_57160 Lsat_1_v8_lg_8 + View
Malus domestica MD16G1198700 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Chr16 + View
Malus domestica MD13G1198600 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Chr13 + View
Malus domestica MD11G1279900 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Chr11 - View
Malus domestica MD03G1259300 FORKED 1 Chr03 - View
Manihot esculenta Manes.05G080600 Chromosome05 + View
Medicago truncatula Medtr1g071450 auxin canalisation protein chr1 - View
Medicago truncatula Medtr7g095500 auxin canalisation protein chr7 + View
Nelumbo nucifera Nn6g34154 chr6 + View
Nelumbo nucifera Nn1g02430 chr1 + View
Olea europaea Oeu023626.1 chr16 + View
Petunia axillaris Peaxi162Scf00230g00068 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Peaxi162Scf00230 - View
Punica granatum PGR004G1297 NC_045131.1 + View
Punica granatum PGR044G2656 NC_045134.1 - View
Prunus persica Prupe.8G235800 Pp08 - View
Prunus persica Prupe.1G020300 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Pp01 + View
Pisum sativum Psat6g059240 Auxin canalisation chr6LG2 - View
Pisum sativum Psat3g062280 Auxin canalisation chr3LG5 - View
Papaver somniferum PSO210G6339 NC_039359.1 + View
Populus trichocarpa Potri.008G157000 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Chr08 + View
Populus trichocarpa Potri.002G049200 PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Chr02 - View
Phaseolus vulgaris Phvul.007G061200 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Chr07 + View
Phaseolus vulgaris Phvul.007G174400 Chr07 + View
Quercus lobata QL06p001188 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0290221 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim04G0197800 chr04 - View
Rhododendron simsii Rhsim13G0028000 chr13 + View
Striga asiatica SGA_v2.0_scaffold1G00524 scaffold1 + View
Salvia bowleyana SalBow4G1656 GWHASIU00000008 - View
Salix brachista Sabra02G0040000 GWHAAZH00000002 - View
Salix brachista Sabra05G0163400 GWHAAZH00000005 + View
Salix brachista Sabra08G0119500 GWHAAZH00000008 + View
Simmondsia chinensis Sc13g0004680 GWHAASQ00000013 + View
Sechium edule Sed0003921 LG02 + View
Sechium edule Sed0009240 LG12 + View
Sechium edule Sed0015522 LG04 + View
Sechium edule Sed0024326 LG05 + View
Solanum lycopersicum Solyc09g065590.3 Auxin canalization protein (DUF828) (AHRD V3.3 *** Q9LUI0_ARATH) SL4.0ch09 + View
Solanum lycopersicum Solyc09g082580.4 Auxin canalization protein (DUF828) (AHRD V3.3 *** Q8VY20_ARATH) SL4.0ch09 + View
Schrenkiella parvula Sp2g08670 PTHR31351//PTHR31351:SF4 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED ch2-4 - View
Schrenkiella parvula Sp5g00230 PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED ch5-1 - View
Schrenkiella parvula Sp3g20510 PTHR31351//PTHR31351:SF4 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED ch3-1 + View
Schrenkiella parvula Sp7g12850 PTHR31351//PTHR31351:SF4 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED ch7-4 - View
Solanum pennellii Sopen09g031440 FUNCTIONS IN: phosphoinositide binding | INVOLVED IN: signal transduction | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant , Protein of unknown function DUF828 | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Spenn-ch09 + View
Solanum pennellii Sopen09g027340 Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway. | FORKED 1 (FKD1) | CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant , Protein of unknown function DUF828 | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400019348 Ice binding protein ST4.03ch09 + View
Solanum tuberosum PGSC0003DMG400006453 Ice binding protein ST4.03ch09 + View
Selenicereus undatus Hund02859 Scaffold_33678 + View
Trochodendron aralioides TAR365G1177 group16 - View
Trochodendron aralioides TAR362G1125 group17 + View
Theobroma cacao Thecc.01G272800 Forked1 Chromosome_1 - View
Theobroma cacao Thecc.04G237800 Emb:CAB10253.1 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104817563 VAN3-binding protein NW_010965946.1 + View
Trifolium pratense TPR.G25711 Tp57577_TGAC_v2_scaf_169 - View
Trifolium pratense TPR.G19090 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI12G0611 NC_052243.1 + View
Tripterygium wilfordii TWI73G1223 NC_052232.1 + View
Tripterygium wilfordii TWI09G1164 NC_052245.1 - View
Utricularia gibba unitig_32.g10821 unitig_32 + View
Vaccinium macrocarpon vmacro15368 Similar to VAB: VAN3-binding protein (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02603 Similar to VAB: VAN3-binding protein (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1142 CM024071.1 - View
Vigna mungo VMungo0720G1592 CM024071.1 - View
Vitis vinifera GSVIVG01018032001 chr5 + View
Vitis vinifera GSVIVG01001202001 chr7 - View