Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0013323 Plant U-box 23 [Theobroma cacao] Chr13 - View
CSS0019109 PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G21070 LG-5 - View
Acer truncatum Atru.chr3.3104 chr3 + View
Acer truncatum Atru.chr8.1342 chr8 - View
Actinidia chinensis Actinidia37750 Lachesis_group5 + View
Actinidia chinensis Actinidia06184 Lachesis_group20 - View
Avicennia marina MSTRG.12389 ScioBoG_17730_HRSCAF_17811 + View
Aquilegia oxysepala Aqoxy1G00648 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VTD8RL PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TG9TSU PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.18 + View
Brassica napus A05p09880 A05 - View
Brassica napus A04p27430 A04 - View
Brassica napus A05p37510 A05 + View
Brassica oleracea BolC4t27975H C4 - View
Beta vulgaris EL10Ac7g16290 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G574.1 PGAv.1.6.scaffold574 - View
Cannabis sativa CANSAT64G0361 NC_044379.1 + View
Cicer arietinum L. Ca_09061_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_11694_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_01632_v3 Ca_LG1_v3 + View
Corylus avellana Haze_20165 Similar to PUB23: E3 ubiquitin-protein ligase PUB23 (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_23561 Similar to PUB24: E3 ubiquitin-protein ligase PUB24 (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc06_g06620 Putative E3 ubiquitin-protein ligase PUB24 chr6 + View
Citrus clementina Ciclev10011844m.g scaffold_6 - View
Citrus clementina Ciclev10028557m.g scaffold_8 + View
Carpinus fangiana Cfa010177 Cfa04 - View
Cardamine hirsuta CARHR130190 U-box domain-containing protein Chr4 - View
Carya illinoinensis CiPaw.09G021300 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.10G018100 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr10 + View
Carya illinoinensis CiPaw.13G128800 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr13 - View
Citrullus lanatus ClCG02G022440 U-box domain-containing protein CG_Chr02 - View
Citrullus lanatus ClCG10G018310 U-box domain-containing protein CG_Chr10 - View
Cucumis melo MELO3C014520.2 RING-type E3 ubiquitin transferase chr05 + View
Cucumis melo MELO3C009543.2 RING-type E3 ubiquitin transferase chr04 - View
Carica papaya Cpa.g.sc104.23 supercontig_104 - View
Chenopodium quinoa AUR62001555 PUB24: E3 ubiquitin-protein ligase PUB24 C_Quinoa_Scaffold_2716 + View
Chenopodium quinoa AUR62020225 PUB23: E3 ubiquitin-protein ligase PUB23 C_Quinoa_Scaffold_2465 + View
Cucumis sativus L. CsaV3_3G038010 RING-type E3 ubiquitin transferase chr3 + View
Cucumis sativus L. CsaV3_6G038570 RING-type E3 ubiquitin transferase chr6 - View
Daucus carota DCAR_020700 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_018204 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_012243 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv12343 GWHABJS00000021 - View
Davidia involucrata Dinv17492 GWHABJS00000010 - View
Durio zibethinus Duzib093G1915 NW_019167937.1 - View
Durio zibethinus Duzib150G1488 NW_019167882.1 + View
Durio zibethinus Duzib106G0989 NW_019168492.1 - View
Durio zibethinus Duzib168G2375 NW_019168159.1 - View
Durio zibethinus Duzib170G0174 NW_019167871.1 + View
Erigeron canadensis ECA233G0918 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA238G1193 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA238G3677 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA248G0315 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.B03814 Chr02 + View
Eucalyptus grandis Eucgr.A02579 Chr01 - View
Eucalyptus grandis Eucgr.J00575 Chr10 + View
Erythranthe guttata Migut.J00696 scaffold_10 - View
Erythranthe guttata Migut.N02452 scaffold_14 + View
Erythranthe guttata Migut.D02388 scaffold_4 + View
Fragaria x ananassa FAN25G3401 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN05G2037 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Fvb6-3 - View
Fragaria x ananassa FAN21G2467 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb3-2 + View
Fragaria x ananassa FAN16G2662 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria vesca FvH4_6g20390 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D05G080800 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D05 + View
Gossypium hirsutum Gohir.D07G117000 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.A01G201100 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED A01 - View
Gossypium hirsutum Gohir.D09G129900 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED D09 - View
Gossypium hirsutum Gohir.A05G077950 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.D04G091600 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED D04 - View
Gossypium hirsutum Gohir.A07G113400 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED A07 + View
Gossypium hirsutum Gohir.A09G099900 PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 A09 + View
Gossypium hirsutum Gohir.D09G099300 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D09 + View
Gossypium hirsutum Gohir.D01G191000 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED D01 - View
Gossypium hirsutum Gohir.A09G133700 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED A09 - View
Gossypium hirsutum Gohir.A04G057200 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED A04 - View
Glycine max Glyma.12G095000 PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Gm12 + View
Glycine max Glyma.10G081900 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Gm10 + View
Glycine max Glyma.02G195900 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Gm02 - View
Glycine max Glyma.12G188900 PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Gm12 + View
Gossypium raimondii Gorai.001G125700 Chr01 + View
Gossypium raimondii Gorai.002G234800 Chr02 - View
Gossypium raimondii Gorai.009G082600 Chr09 + View
Gossypium raimondii Gorai.006G148900 Chr06 - View
Gossypium raimondii Gorai.006G116300 Chr06 + View
Helianthus annuus HanXRQChr13g0398551 Putative zinc finger, RING/FYVE/PHD-type; Armadillo-type fold HanXRQChr13 - View
Lupinus albus Lalb_Chr25g0287971 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lalb_Chr25 - View
Lupinus albus Lalb_Chr20g0111331 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lalb_Chr20 - View
Lupinus albus Lalb_Chr19g0136241 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr19 + View
Lotus japonicus Lj5g0025220 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED chr5 - View
Lotus japonicus Lj3g0012262 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED chr3 + View
Lotus japonicus Lj1g0027254 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED chr1 - View
Lonicera japonica Lj1C268T4 GWHAAZE00000001 + View
Lonicera japonica Lj2P958T7 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_2_53860 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_6_33780 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lsat_1_v8_lg_6 - View
Malus domestica MD12G1040800 plant U-box 24 Chr12 + View
Malus domestica MD03G1156000 plant U-box 23 Chr03 - View
Malus domestica MD14G1039900 plant U-box 24 Chr14 + View
Malus domestica MD11G1173500 plant U-box 23 Chr11 + View
Manihot esculenta Manes.08G034000 Chromosome08 + View
Medicago truncatula Medtr7g106340 E3 ubiquitin-protein ligase PUB23-like protein chr7 + View
Medicago truncatula Medtr4g051515 E3 ubiquitin-protein ligase PUB23-like protein chr4 - View
Medicago truncatula Medtr2g087350 E3 ubiquitin-protein ligase PUB22-like protein chr2 - View
Nelumbo nucifera Nn6g34677 chr6 + View
Nelumbo nucifera Nn2g14318 chr2 + View
Olea europaea Oeu031453.1 scaffold261 - View
Olea europaea Oeu009040.1 chr16 + View
Oryza sativa ssp. japonica Os05g0439400 Similar to Arm repeat containing protein. chr05 + View
Oryza sativa ssp. japonica Os01g0865700 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr01 - View
Punica granatum PGR142G2037 NC_045128.1 + View
Punica granatum PGR004G1472 NC_045131.1 - View
Punica granatum PGR119G0721 NC_045132.1 + View
Prunus persica Prupe.7G094000 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Pp07 - View
Prunus persica Prupe.6G145200 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Pp06 + View
Papaver somniferum PSO339G6565 NC_039366.1 + View
Papaver somniferum PSO384G3321 NC_039368.1 - View
Populus trichocarpa Potri.001G216100 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr01 + View
Populus trichocarpa Potri.006G202600 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr06 - View
Populus trichocarpa Potri.016G069400 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr16 - View
Phaseolus vulgaris Phvul.001G196000 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr01 + View
Phaseolus vulgaris Phvul.007G267700 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr07 - View
Phaseolus vulgaris Phvul.005G119100 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr05 + View
Quercus lobata QL07p036477 7 - View
Quercus lobata QL01p019540 1 + View
Rhododendron simsii Rhsim03G0064200 chr03 - View
Rhododendron simsii Rhsim13G0196600 chr13 + View
Striga asiatica SGA_v2.0_scaffold31G12862 scaffold31 + View
Salvia bowleyana SalBow6G5359 GWHASIU00000002 + View
Salvia bowleyana SalBow3G0253 GWHASIU00000006 + View
Salix brachista Sabra06G0155800 GWHAAZH00000006 - View
Salix brachista Sabra16G0070200 GWHAAZH00000016 - View
Solanum lycopersicum Solyc01g007000.4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** Q3HLY8_CAPAN) SL4.0ch01 + View
Schrenkiella parvula Sp3g10070 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED ch3-1 - View
Solanum pennellii Sopen01g002990 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. | plant U-box 23 (PUB23) | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: plant U-box 22 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400021360 U-box protein ST4.03ch01 + View
Trochodendron aralioides TAR623G1041 group7 + View
Trochodendron aralioides TAR636G1239 group1 - View
Trochodendron aralioides TAR633G1992 group2 + View
Trochodendron aralioides TAR369G0175 group18 + View
Theobroma cacao Thecc.09G271500 U-box domain-containing protein 23 Chromosome_9 + View
Theobroma cacao Thecc.05G105300 Plant U-box 24 Chromosome_5 + View
Tripterygium wilfordii TWI31G0228 NC_052233.1 + View
Tripterygium wilfordii TWI53G1781 NC_052244.1 - View
Tripterygium wilfordii TWI79G0743 NC_052238.1 + View
Tripterygium wilfordii TWI74G0091 NC_052234.1 + View
Vigna mungo VMungo1080G0772 CM024079.1 + View
Vigna mungo VMungo1383G2574 CM024070.1 + View
Vigna mungo VMungo0720G1108 CM024071.1 + View
Vitis vinifera GSVIVG01037585001 chr6 + View
Zea mays Zm00001eb407250 Zm00001e039417 plant U-box 24 10 + View