Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0026167 PREDICTED: NHL repeat-containing protein 2 [Vitis vinifera] Contig757 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia16868 Lachesis_group12 - View
Amaranthus hybridus Ah.06g196020 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic (EC 3.1.3.-) AmaHy_arrow1_Scaffold_6 + View
Arabidopsis thaliana AT1G56500 haloacid dehalogenase-like hydrolase family protein Encodes a thylakoid membrane protein with thioredoxin-like and beta-propeller domains located in the lumen and a haloacid-dehalogenase domain exposed to the chloroplast stroma. The protein's role may be to prevent formation of a slowly reversible form of antenna quenching%2C thereby maintaining the efficiency of light harvesting. haloacid dehalogenase-like hydrolase family protein%3B FUNCTIONS IN: hydrolase activity%2C oxidoreductase activity%2C catalytic activity%3B INVOLVED IN: metabolic process%2C cell redox homeostasis%3B LOCATED IN: chloroplast%2C chloroplast stroma%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833)%2C Low-density lipoprotein receptor%2C class B (YWTD) repeat (InterPro:IPR000033)%2C Thioredoxin fold (InterPro:IPR012335)%2C Six-bladed beta-propeller%2C TolB-like (InterPro:IPR011042)%2C Haloacid dehalogenase-like hydrolase (InterPro:IPR005834)%2C Thioredoxin-like (InterPro:IPR017936)%2C NHL repeat (InterPro:IPR001258)%2C Thioredoxin-like fold (InterPro:IPR012336)%2C Redoxin (InterPro:IPR013740)%2C HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (InterPro:IPR006402)%3B BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT3G07060.1)%3B Has 23445 Blast hits to 20574 proteins in 2565 species: Archae - 340%3B Bacteria - 17044%3B Metazoa - 1036%3B Fungi - 332%3B Plants - 721%3B Viruses - 3%3B Other Eukaryotes - 3969 (source: NCBI BLink). Chr1 + View
Beta vulgaris EL10Ac4g09472 PTHR13833//PTHR13833:SF49 - FAMILY NOT NAMED // NHL REPEAT-CONTAINING PROTEIN 2 Chr4_EL10_PGA_scaffold1 + View
Capsicum annuum CAN.G1076.24 PGAv.1.6.scaffold1076 + View
Cannabis sativa CANSAT54G1875 NC_044375.1 - View
Corylus avellana Haze_04033 Similar to SOQ1: Protein SUPPRESSOR OF QUENCHING 1, chloroplastic (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc02_g35200 haloacid dehalogenase-like hydrolase family protein chr2 + View
Citrus clementina Ciclev10000268m.g scaffold_5 + View
Ceratophyllum demersum CDE02G4500 1 - View
Carpinus fangiana Cfa006727 Cfa02 - View
Cardamine hirsuta CARHR055040 NHL repeat containing protein Chr2 - View
Carya illinoinensis CiPaw.07G030400 PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 Chr07 + View
Carica papaya Cpa.g.sc48.172 supercontig_48 + View
Durio zibethinus Duzib106G1789 NW_019168492.1 - View
Eucalyptus grandis Eucgr.H03302 Chr08 - View
Fragaria x ananassa FAN02G4229 PTHR24104//PTHR24104:SF13 - FAMILY NOT NAMED // HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN Fvb6-4 + View
Fragaria x ananassa FAN09G2780 PTHR13833//PTHR13833:SF49 - FAMILY NOT NAMED // NHL REPEAT-CONTAINING PROTEIN 2 Fvb6-2 - View
Fragaria x ananassa FAN05G3958 PTHR13833//PTHR13833:SF49 - FAMILY NOT NAMED // NHL REPEAT-CONTAINING PROTEIN 2 Fvb6-3 - View
Fragaria x ananassa FAN14G3496 PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 Fvb6-1 - View
Fragaria vesca FvH4_6g07620 PTHR24104:SF13 - HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN Fvb6 + View
Hydrangea macrophylla Hma1.2p1_0008F-1.1_g005500 Hma1.2p1_0008F-1.1 - View
Lonicera japonica Lj5C327G4 GWHAAZE00000005 - View
Manihot esculenta Manes.09G177500 Chromosome09 + View
Punica granatum PGR031G3792 NC_045127.1 + View
Prunus persica Prupe.6G311900 PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 Pp06 - View
Populus trichocarpa Potri.013G007800 PTHR13833//PTHR13833:SF49 - FAMILY NOT NAMED // NHL REPEAT-CONTAINING PROTEIN 2 Chr13 - View
Rosa chinensis RcHm_v2.0_Chr3g0457281 RcHm_v2.0_Chr3 + View
Salix brachista Sabra13G0006700 GWHAAZH00000013 - View
Solanum lycopersicum Solyc01g100650.3 NHL repeat-containing protein 2-like (AHRD V3.3 *** A0A2K3NND0_TRIPR) SL4.0ch01 + View
Solanum pennellii Sopen01g044170 haloacid dehalogenase-like hydrolase family protein | FUNCTIONS IN: hydrolase activity, oxidoreductase activity, catalytic activity | INVOLVED IN: metabolic process, cell redox homeostasis | LOCATED IN: chloroplast, chloroplast stroma | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Haloacid dehydrogenase/epoxide hydrolase , Low-density lipoprotein receptor, class B (YWTD) repeat , Thioredoxin fold , Six-bladed beta-propeller, TolB-like , Haloacid dehalogenase-like hydrolase , Thioredoxin-like , NHL repeat , Thioredoxin-like fold , Redoxin , HAD-superfamily hydrolase, subfamily IA, variant 3 | BEST Arabidopsis thaliana protein match is: NHL domain-containing protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG402002797 2-deoxyglucose-6-phosphate phosphatase ST4.03ch01 + View
Selenicereus undatus Hund21866 Scaffold_33680 - View
Theobroma cacao Thecc.05G324300 Haloacid dehalogenase-like hydrolase family protein Chromosome_5 + View
Tripterygium wilfordii TWI56G0054 NC_052242.1 - View
Vaccinium macrocarpon vmacro01574 Similar to SOQ1: Protein SUPPRESSOR OF QUENCHING 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View