Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0035815 PREDICTED: pentatricopeptide repeat-containing protein At4g20090 [Prunus mume] Contig1203 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G2510 LG-6 - View
Arabidopsis lyrata AL7G33760 scaffold_7 + View
Arabidopsis thaliana AT4G20090 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1025 (EMB1025)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1)%3B Has 50788 Blast hits to 13881 proteins in 299 species: Archae - 2%3B Bacteria - 48%3B Metazoa - 729%3B Fungi - 797%3B Plants - 47488%3B Viruses - 0%3B Other Eukaryotes - 1724 (source: NCBI BLink). Chr4 - View
Brassica napus A01p11870 A01 - View
Brassica napus C01p14070 C01 - View
Brassica oleracea BolC1t01374H C1 - View
Brassica rapa BraA01t01129Z A01 - View
Corylus avellana Haze_05243 Similar to EMB1025: Pentatricopeptide repeat-containing protein At4g20090 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc09_g05030 Pentatricopeptide repeat-containing protein At4g20090 chr9 + View
Citrus clementina Ciclev10014519m.g scaffold_2 + View
Carpinus fangiana Cfa001139 Cfa01 - View
Cardamine hirsuta CARHR226930 Pentatricopeptide repeat-containing protein, putative Chr7 - View
Carya illinoinensis CiPaw.09G138700 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr09 - View
Citrullus lanatus ClCG01G025760 Pentatricopeptide repeat-containing protein, putative CG_Chr01 - View
Capsella rubella Carub.0007s2104 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_7 + View
Daucus carota DCAR_001266 hypothetical protein DCARv2_Chr1 - View
Eucalyptus grandis Eucgr.D00014 Chr04 + View
Fragaria x ananassa FAN16G0835 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb3-3 - View
Fragaria x ananassa FAN25G3588 PF13041 - PPR repeat family (PPR_2) Fvb3-1 + View
Fragaria x ananassa FAN21G1032 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-2 - View
Fragaria x ananassa FAN11G2573 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb3-4 + View
Fragaria vesca FvH4_3g13070 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb3 - View
Glycine max Glyma.09G050500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm09 - View
Lotus japonicus Lj6g0001159 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) chr6 + View
Lonicera japonica Lj2P342T43 GWHAAZE00000002 + View
Malus domestica MD10G1226600 Pentatricopeptide repeat (PPR) superfamily protein Chr10 + View
Medicago truncatula Medtr2g035450 PPR containing plant-like protein chr2 - View
Olea europaea Oeu046920.2 chr7 + View
Prunus persica Prupe.4G118800 PF13041 - PPR repeat family (PPR_2) Pp04 - View
Pisum sativum Psat1g150440 PPR repeat family chr1LG6 + View
Populus trichocarpa Potri.003G154800 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr03 - View
Phaseolus vulgaris Phvul.009G243700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 + View
Rosa chinensis RcHm_v2.0_Chr5g0021261 RcHm_v2.0_Chr5 - View
Salix brachista Sabra03G0112000 GWHAAZH00000003 - View
Solanum lycopersicum Solyc02g081860.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XFC9_CAPBA) SL4.0ch02 - View
Solanum pennellii Sopen02g026480 embryo defective 1025 (EMB1025) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400007329 Pentatricopeptide repeat-containing protein ST4.03ch02 - View
Theobroma cacao Thecc.02G002900 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104811820 pentatricopeptide repeat-containing protein At4g20090 NW_010960187.1 - View
Vaccinium macrocarpon vmacro11017 Similar to EMB1025: Pentatricopeptide repeat-containing protein At4g20090 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1642 CM024072.1 - View
Vitis vinifera GSVIVG01012156001 chr1 + View