Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047911 PREDICTED: tubby-like F-box protein 3 [Nelumbo nucifera] Chr5 + View
CSS0012993 Tubby like protein 3 isoform 1 [Theobroma cacao] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10940 LG-11 + View
Actinidia chinensis Actinidia40223 Lachesis_group22 + View
Actinidia chinensis Actinidia23431 Lachesis_group3 - View
Arabidopsis lyrata AL3G17320 scaffold_3 + View
Arabidopsis lyrata AL6G29960 scaffold_6 - View
Avicennia marina MSTRG.10052 ScioBoG_12795_HRSCAF_12848 + View
Aquilegia oxysepala Aqoxy5G00616 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FL9AGG PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A26VA3 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT5G18680 tubby like protein 11 Member of TLP family tubby like protein 11 (TLP11)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C Tubby%2C C-terminal%2C conserved site (InterPro:IPR018066)%2C Tubby%2C C-terminal (InterPro:IPR000007)%3B BEST Arabidopsis thaliana protein match is: tubby-like protein 9 (TAIR:AT3G06380.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G06380 tubby-like protein 9 Member of TLP family tubby-like protein 9 (TLP9)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C Tubby%2C C-terminal%2C conserved site (InterPro:IPR018066)%2C Tubby%2C C-terminal (InterPro:IPR000007)%3B BEST Arabidopsis thaliana protein match is: tubby like protein 11 (TAIR:AT5G18680.1)%3B Has 949 Blast hits to 946 proteins in 117 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 350%3B Fungi - 19%3B Plants - 465%3B Viruses - 0%3B Other Eukaryotes - 115 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0706G075 AmTr_v1.0_scaffold00057 + View
Brassica carinata BcaC05g30035 ChrC05 - View
Brassica carinata BcaB08g36653 ChrB08 + View
Brassica carinata BcaC04g18654 ChrC04 + View
Brassica napus C05p60870 C05 - View
Brassica napus A10p20880 A10 + View
Brassica napus C09p57770 C09 + View
Brassica oleracea BolC9t58647H C9 + View
Brassica rapa BraA10t44153Z A10 + View
Capsicum annuum CAN.G223.9 PGAv.1.6.scaffold223 + View
Cannabis sativa CANSAT78G0085 NC_044376.1 + View
Cicer arietinum L. Ca_00576_v3 Ca_LG1_v3 - View
Corylus avellana Haze_01057 Similar to TULP3: Tubby-like F-box protein 3 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_04821 Similar to TULP3: Tubby-like F-box protein 3 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc01_g20280 Tubby-like F-box protein 3 chr1 + View
Coffea canephora Cc03_g02390 Tubby-like F-box protein 6 chr3 - View
Citrus clementina Ciclev10020468m.g scaffold_3 + View
Citrus clementina Ciclev10005517m.g scaffold_9 - View
Ceratophyllum demersum CDE05G1681 3 - View
Ceratophyllum demersum CDE11G1059 9 - View
Carpinus fangiana Cfa006028 Cfa02 - View
Carpinus fangiana Cfa015497 Cfa06 - View
Cardamine hirsuta CARHR194320 tubby like protein 11 Chr6 + View
Carya illinoinensis CiPaw.01G153500 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Chr01 - View
Carya illinoinensis CiPaw.07G100600 PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED Chr07 + View
Citrullus lanatus ClCG05G005780 tubby like protein 3 LENGTH=407 CG_Chr05 + View
Citrullus lanatus ClCG06G005400 tubby like protein 3 LENGTH=407 CG_Chr06 - View
Cucumis melo MELO3C021363.2 Tubby-like F-box protein chr11 + View
Cucumis melo MELO3C006604.2 Tubby-like F-box protein chr06 + View
Corchorus olitorius COL.COLO4_13932 hypothetical protein AWUE01015340.1 - View
Carica papaya Cpa.g.sc16.111 supercontig_16 + View
Capsella rubella Carub.0006s1698 PTHR16517//PTHR16517:SF40 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 11-RELATED scaffold_6 - View
Capsella rubella Carub.0003s0582 PTHR16517//PTHR16517:SF40 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 11-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_6G005720 Tubby-like F-box protein chr6 + View
Cucumis sativus L. CsaV3_3G014110 Tubby-like F-box protein chr3 + View
Daucus carota DCAR_030566 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv38328 GWHABJS00000016 + View
Davidia involucrata Dinv44428 GWHABJS00000014 + View
Davidia involucrata Dinv32997 GWHABJS00000010 + View
Durio zibethinus Duzib151G0097 NW_019167904.1 + View
Durio zibethinus Duzib133G1095 NW_019167938.1 - View
Durio zibethinus Duzib138G0112 NW_019167893.1 - View
Durio zibethinus Duzib212G0739 NW_019168026.1 - View
Eucalyptus grandis Eucgr.H01209 Chr08 - View
Eucalyptus grandis Eucgr.H03766 Chr08 + View
Erythranthe guttata Migut.G00213 scaffold_7 - View
Erythranthe guttata Migut.D00224 scaffold_4 - View
Eutrema salsugineum Thhalv10020909m.g PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED scaffold_13 - View
Eutrema salsugineum Thhalv10013783m.g PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED scaffold_2 - View
Fragaria x ananassa FAN22G0400 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN12G1336 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb4-3 - View
Fragaria x ananassa FAN17G0969 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb4-2 - View
Fragaria x ananassa FAN24G1489 PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb2-2 + View
Fragaria x ananassa FAN07G2670 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria x ananassa FAN12G0715 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb4-3 + View
Fragaria x ananassa FAN27G2996 PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb2-1 - View
Fragaria x ananassa FAN20G2883 PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb2-3 + View
Fragaria vesca FvH4_2g24790 PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb2 - View
Fragaria vesca FvH4_4g17170 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.A11G117800 PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED A11 - View
Gossypium hirsutum Gohir.A10G101660 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED A10 - View
Gossypium hirsutum Gohir.A02G046200 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED A02 + View
Gossypium hirsutum Gohir.D10G166300 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED D10 + View
Gossypium hirsutum Gohir.D02G051900 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED D02 + View
Glycine max Glyma.13G214900 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.15G098200 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Gm15 - View
Glycine max Glyma.07G251800 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Gm07 - View
Glycine max Glyma.17G022700 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Gm17 + View
Gossypium raimondii Gorai.011G185600 Chr11 + View
Gossypium raimondii Gorai.005G057200 Chr05 + View
Lupinus albus Lalb_Chr18g0055741 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Lalb_Chr18 - View
Lupinus albus Lalb_Chr20g0118141 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Lalb_Chr20 - View
Lotus japonicus LjContig00389g0020886 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Contig00389 + View
Lonicera japonica Lj1C38T14 GWHAAZE00000001 - View
Lonicera japonica Lj6C669T2 GWHAAZE00000006 + View
Magnolia biondii MBI19_g37514_MAGBIO AED:0.18 Chr19 - View
Malus domestica MD11G1298700 tubby like protein 3 Chr11 - View
Malus domestica MD16G1175400 tubby like protein 3 Chr16 - View
Malus domestica MD13G1174100 tubby like protein 3 Chr13 - View
Manihot esculenta Manes.15G017200 Chromosome15 - View
Manihot esculenta Manes.03G190900 Chromosome03 + View
Manihot esculenta Manes.05G067900 Chromosome05 - View
Medicago truncatula Medtr2g020280 tubby-F-box-like protein chr2 - View
Nelumbo nucifera Nn3g21295 chr3 + View
Nelumbo nucifera Nn4g26031 chr4 - View
Olea europaea Oeu029275.1 scaffold244 - View
Olea europaea Oeu062884.1 scaffold920 + View
Olea europaea Oeu044795.1 chr22 - View
Oryza sativa ssp. japonica Os07g0667000 Similar to Tubby-like protein 3. chr07 + View
Petunia axillaris Peaxi162Scf00033g01611 Tubby-like F-box protein 6 Peaxi162Scf00033 - View
Petunia axillaris Peaxi162Scf00067g00619 Tubby-like F-box protein 3 Peaxi162Scf00067 + View
Petunia axillaris Peaxi162Scf00386g00220 Tubby-like F-box protein 6 Peaxi162Scf00386 + View
Punica granatum PGR119G1298 NC_045132.1 - View
Prunus persica Prupe.1G142500 Pp01 - View
Prunus persica Prupe.8G253000 PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED Pp08 - View
Pisum sativum Psat1g187080 Tub family chr1LG6 + View
Papaver somniferum PSO210G1912 NC_039359.1 + View
Populus trichocarpa Potri.008G195200 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Chr08 - View
Phaseolus vulgaris Phvul.006G161100 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Chr06 + View
Phaseolus vulgaris Phvul.003G100700 PTHR16517//PTHR16517:SF47 - TUBBY-RELATED // SUBFAMILY NOT NAMED Chr03 + View
Quercus lobata QL06p007338 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0292621 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr4g0420951 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0216000 chr04 + View
Salvia bowleyana SalBow2G0669 GWHASIU00000007 + View
Simmondsia chinensis Sc19g0004930 GWHAASQ00000019 + View
Sechium edule Sed0022804 LG02 - View
Sechium edule Sed0014807 LG04 - View
Sechium edule Sed0003844 LG12 - View
Solanum lycopersicum Solyc01g067680.3 Tubby-like F-box protein (AHRD V3.3 *** A0A2G3DFX8_CAPCH) SL4.0ch01 - View
Schrenkiella parvula Sp6g25660 PTHR16517//PTHR16517:SF40 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 11-RELATED ch6-6 + View
Solanum pennellii Sopen01g029620 Member of TLP family | tubby like protein 3 (TLP3) | FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like , Tubby, C-terminal | BEST Arabidopsis thaliana protein match is: tubby-like protein 9 ., Tubby, C-terminal Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400010655 Phosphoric diester hydrolase ST4.03ch01 - View
Trochodendron aralioides TAR362G1259 group17 + View
Trochodendron aralioides TAR365G1162 group16 + View
Trochodendron aralioides TAR636G2343 group1 + View
Trochodendron aralioides TAR633G0767 group2 + View
Theobroma cacao Thecc.01G291100 Tubby like protein 3 Chromosome_1 + View
Theobroma cacao Thecc.04G277300 Tubby-like F-box protein 3 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104818841 tubby-like F-box protein 11 NW_010966177.1 + View
Trifolium pratense TPR.G1505 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI73G1118 NC_052232.1 + View
Tripterygium wilfordii TWI09G0002 NC_052245.1 + View
Utricularia gibba unitig_748.g8369 unitig_748 + View
Vaccinium macrocarpon vmacro15264 Similar to TULP6: Tubby-like F-box protein 6 (Oryza sativa subsp. japonica OX%3D39947) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro08205 Similar to TULP6: Tubby-like F-box protein 6 (Oryza sativa subsp. japonica OX%3D39947) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2907 CM024074.1 - View
Vigna mungo VMungo0540G0959 CM024075.1 - View
Vitis vinifera GSVIVG01017810001 chr5 - View
Vitis vinifera GSVIVG01010999001 chr7 + View