Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CSS0013169 | hypothetical protein VITISV_026335 [Vitis vinifera] | Chr8 | - | View |
CSS0005483 | PREDICTED: uncharacterized protein LOC103429605 [Malus domestica] | Chr9 | - | View |
CSS0010122 | hypothetical protein VITISV_044375 [Vitis vinifera] | Chr3 | - | View |
CSS0005123 | hypothetical protein VITISV_030752 [Vitis vinifera] | Chr2 | + | View |
CSS0037649 | hypothetical protein VITISV_038324 [Vitis vinifera] | Chr1 | + | View |
CSS0028899 | gag-pol polyprotein [Populus deltoides] | Chr14 | - | View |
CSS0047905 | PREDICTED: uncharacterized protein LOC103421593 [Malus domestica] | Chr12 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr9.979 | chr9 | - | View | |
Acer truncatum | Atru.chr11.404 | chr11 | - | View | |
Cicer arietinum L. | Ca_02673_v3 | Ca_LG1_v3 | - | View | |
Erigeron canadensis | ECA246G5056 | Conyza_canadensis_scaffold:8 | + | View | |
Erigeron canadensis | ECA246G1364 | Conyza_canadensis_scaffold:8 | - | View | |
Erigeron canadensis | ECA248G3252 | Conyza_canadensis_scaffold:9 | + | View | |
Erigeron canadensis | ECA234G1295 | Conyza_canadensis_scaffold:4 | - | View | |
Erigeron canadensis | ECA246G0554 | Conyza_canadensis_scaffold:8 | + | View | |
Erigeron canadensis | ECA246G5332 | Conyza_canadensis_scaffold:8 | - | View | |
Erigeron canadensis | ECA236G4512 | Conyza_canadensis_scaffold:3 | - | View | |
Lotus japonicus | Lj2g0024580 | PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | chr2 | + | View |
Malus domestica | MD16G1029500 | Chr16 | + | View | |
Manihot esculenta | Manes.06G022851 | Chromosome06 | + | View | |
Papaver somniferum | PSO478G2994 | NC_039361.1 | - | View | |
Salix brachista | Sabra17G0101800 | GWHAAZH00000017 | + | View | |
Salix brachista | Sabra10G0083300 | GWHAAZH00000010 | - | View | |
Solanum pennellii | Sopen12g025640 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 | Spenn-ch12 | + | View |
Tarenaya hassleriana | THA.LOC104808376 | uncharacterized protein LOC104808376 | NW_010964598.1 | - | View |
Tripterygium wilfordii | TWI63G1325 | NC_052240.1 | + | View |