Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047329 PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Vitis vinifera] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G5670 LG-7 - View
Acer truncatum Atru.chr13.1528 chr13 + View
Actinidia chinensis Actinidia15228 Lachesis_group26 - View
Actinidia chinensis Actinidia21301 Lachesis_group28 - View
Arabidopsis lyrata AL1G34870 scaffold_1 - View
Aquilegia oxysepala Aqoxy6G00265 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8ZSB7P PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D2JSQE PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT1G21700 SWITCH/sucrose nonfermenting 3C a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A%2C the other two members of the SWI3 family. Homologous to yeast SWI3 %26 RSC8%2C components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003). SWITCH/sucrose nonfermenting 3C (SWI3C)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: chromatin remodeling%3B LOCATED IN: SWI/SNF complex%2C chromatin remodeling complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C SWIRM (InterPro:IPR007526)%2C SANT%2C eukarya (InterPro:IPR017884)%3B BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3)%3B Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0%3B Bacteria - 43%3B Metazoa - 1892%3B Fungi - 779%3B Plants - 380%3B Viruses - 2%3B Other Eukaryotes - 1607 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC05g26089 ChrC05 - View
Brassica carinata BcaC07g39112 ChrC07 - View
Brassica carinata BcaB07g32167 ChrB07 - View
Brassica napus A06p17790 A06 - View
Brassica napus C05p20680 C05 - View
Brassica napus A08p28850 A08 + View
Brassica oleracea BolC5t30767H C5 - View
Brassica oleracea BolC8t49738H C8 - View
Brassica rapa BraA06t24871Z A06 - View
Brassica rapa BraA08t34815Z A08 + View
Cicer arietinum L. Ca_16578_v3 Ca_LG5_v3 + View
Corylus avellana Haze_17517 Similar to SWI3C: SWI/SNF complex subunit SWI3C (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc10_g12300 SWI/SNF complex subunit SWI3C chr10 + View
Citrus clementina Ciclev10000405m.g scaffold_5 + View
Ceratophyllum demersum CDE06G1933 4 + View
Cardamine hirsuta CARHR022060 SWI/SNF complex subunit SWI3C Chr1 - View
Carya illinoinensis CiPaw.15G034000 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr15 - View
Carya illinoinensis CiPaw.16G025500 PF00249//PF04433 - Myb-like DNA-binding domain (Myb_DNA-binding) // SWIRM domain (SWIRM) Chr16 - View
Citrullus lanatus ClCG11G015890 SWI/SNF complex subunit SMARCC2 CG_Chr11 + View
Cucumis melo MELO3C010503.2 SWI/SNF complex subunit SWI3C chr07 - View
Carica papaya Cpa.g.sc64.124 supercontig_64 + View
Capsella rubella Carub.0001s2114 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA scaffold_1 - View
Cucumis sativus L. CsaV3_4G028080 SWI/SNF complex subunit SWI3C chr4 - View
Daucus carota DCAR_003565 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv27281 GWHABJS00000002 + View
Davidia involucrata Dinv14648 GWHABJS00000011 + View
Durio zibethinus Duzib116G0856 NW_019167949.1 + View
Durio zibethinus Duzib041G0679 NW_019167826.1 + View
Durio zibethinus Duzib093G1487 NW_019167937.1 - View
Erigeron canadensis ECA246G4266 Conyza_canadensis_scaffold:8 + View
Erythranthe guttata Migut.N03270 scaffold_14 - View
Eutrema salsugineum Thhalv10006819m.g scaffold_5 + View
Fragaria x ananassa FAN15G3219 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA Fvb2-4 + View
Fragaria x ananassa FAN24G0753 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA Fvb2-2 - View
Fragaria vesca FvH4_2g27500 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Fvb2 + View
Gossypium hirsutum Gohir.D02G079200 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA D02 - View
Gossypium hirsutum Gohir.A02G071900 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA A02 - View
Glycine max Glyma.13G031300 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Gm13 + View
Glycine max Glyma.06G115600 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Gm06 + View
Glycine max Glyma.04G247200 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Gm04 - View
Glycine max Glyma.14G153000 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Gm14 + View
Gossypium raimondii Gorai.005G088500 Chr05 - View
Lupinus albus Lalb_Chr08g0241261 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA Lalb_Chr08 - View
Lupinus albus Lalb_Chr11g0066081 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA Lalb_Chr11 + View
Lupinus albus Lalb_Chr23g0271131 Lalb_Chr23 + View
Lotus japonicus Lj1g0001950 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA chr1 - View
Lonicera japonica Lj7C345G4 GWHAAZE00000007 - View
Lonicera japonica Lj4A636G19 GWHAAZE00000004 + View
Manihot esculenta Manes.02G166500 Chromosome02 + View
Manihot esculenta Manes.18G080000 Chromosome18 + View
Medicago truncatula Medtr3g088480 SWI/SNF complex protein chr3 + View
Nicotiana tabacum Nitab4.5_0000322g0040 SWIRM domain, Homeodomain-like, SANT/Myb domain, SANT domain, Winged helix-turn-helix DNA-binding domain Nitab4.5_0000322 - View
Olea europaea Oeu040406.1 chr5 + View
Petunia axillaris Peaxi162Scf00051g01715 SWI/SNF complex subunit SWI3C Peaxi162Scf00051 + View
Punica granatum PGR042G2649 NC_045130.1 + View
Prunus persica Prupe.1G492600 Pp01 - View
Pisum sativum Psat5g086040 SWIRM-associated region 1 chr5LG3 - View
Papaver somniferum PSO170G0954 NC_039360.1 + View
Populus trichocarpa Potri.002G080600 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr02 - View
Populus trichocarpa Potri.005G180800 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr05 + View
Phaseolus vulgaris Phvul.001G071900 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr01 - View
Phaseolus vulgaris Phvul.009G127700 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr09 + View
Quercus lobata QL09p033728 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0296331 RcHm_v2.0_Chr6 + View
Striga asiatica SGA_v2.0_scaffold24G10435 scaffold24 - View
Striga asiatica SGA_v2.0_scaffold28G11985 scaffold28 - View
Salix brachista Sabra02G0063100 GWHAAZH00000002 - View
Salix brachista Sabra05G0136800 GWHAAZH00000005 + View
Sechium edule Sed0027165 LG05 + View
Sechium edule Sed0006418 LG06 - View
Solanum lycopersicum Solyc06g060120.3 SWI/SNF complex subunit SWI3C (AHRD V3.3 *** A0A2G3C734_CAPCH) SL4.0ch06 - View
Schrenkiella parvula Sp1g19260 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA ch1-1 - View
Selenicereus undatus Hund17314 Scaffold_33675 + View
Trochodendron aralioides TAR376G1110 group14 - View
Trochodendron aralioides TAR628G1385 group5 - View
Theobroma cacao Thecc.08G129700 SWITCH/sucrose nonfermenting 3C Chromosome_8 + View
Tarenaya hassleriana THA.LOC104800230 SWI/SNF complex subunit SWI3C NW_010969032.1 + View
Tripterygium wilfordii TWI34G1002 NC_052235.1 + View
Tripterygium wilfordii TWI60G0950 NC_052246.1 - View
Vigna mungo VMungo1309G1139 CM024072.1 + View
Vigna mungo VMungo0647G1964 CM024073.1 - View
Vitis vinifera GSVIVG01008831001 chr18 - View