Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023445 Zinc finger, C3HC4 type (RING finger) family protein isoform 1 [Theobroma cacao] Chr6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Avicennia marina MSTRG.2126 ScioBoG_102834_HRSCAF_103055 + View
Arabidopsis thaliana AT2G01735 RING-finger protein for embryogenesi encodes a RING-H2 zinc finger protein essential for seed development. RING-finger protein for embryogenesis (RIE1)%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: Zinc finger%2C C3HC4 type (RING finger) family protein (TAIR:AT1G68070.1)%3B Has 9688 Blast hits to 9662 proteins in 283 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2533%3B Fungi - 743%3B Plants - 5052%3B Viruses - 40%3B Other Eukaryotes - 1314 (source: NCBI BLink). Chr2 + View
Corylus avellana Haze_10878 Similar to RIE1: E3 ubiquitin protein ligase RIE1 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g07290 E3 ubiquitin protein ligase RIE1 chr11 - View
Citrus clementina Ciclev10015731m.g scaffold_2 + View
Carpinus fangiana Cfa015024 Cfa06 - View
Carica papaya Cpa.g.sc2.192 supercontig_2 + View
Eucalyptus grandis Eucgr.G02105 Chr07 + View
Fragaria x ananassa FAN07G0922 PTHR14155//PTHR14155:SF73 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria vesca FvH4_4g33530 PTHR14155//PTHR14155:SF73 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb4 + View
Lotus japonicus Lj2g0019966 PTHR14155//PTHR14155:SF73 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr2 + View
Malus domestica MD13G1020200 Zinc finger Chr13 + View
Malus domestica MD16G1018400 Zinc finger Chr16 + View
Prunus persica Prupe.1G333500 PTHR14155//PTHR14155:SF73 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Pp01 - View
Pisum sativum Psat6g046440 Zinc finger + C3HC4 RING-type chr6LG2 + View
Papaver somniferum PSO478G0955 NC_039361.1 - View
Populus trichocarpa Potri.010G106300 PTHR14155//PTHR14155:SF85 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN PROTEIN LIGASE RIE1 Chr10 + View
Phaseolus vulgaris Phvul.003G019050 PTHR14155//PTHR14155:SF73 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.002G321300 PTHR14155//PTHR14155:SF73 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 + View
Quercus lobata QL03p035915 3 - View
Trochodendron aralioides TAR629G2712 group0 - View