Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038682 hypothetical protein JCGZ_16188 [Jatropha curcas] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G12380 LG-3 + View
Acer truncatum Atru.chr3.2101 chr3 + View
Acer truncatum Atru.chr3.2394 chr3 + View
Actinidia chinensis Actinidia16237 Lachesis_group24 + View
Aquilegia oxysepala Aqoxy1G00491 CHR01 - View
Arabidopsis thaliana AT5G56510 pumilio 12 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 12 (PUM12)%3B FUNCTIONS IN: RNA binding%2C binding%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: pumilio 7 (TAIR:AT1G78160.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC04g20082 ChrC04 - View
Brassica oleracea BolC9t57658H C9 + View
Corylus avellana Haze_22934 Similar to APUM12: Pumilio homolog 12 (Arabidopsis thaliana OX%3D3702) 6 + View
Citrus clementina Ciclev10017802m.g scaffold_2 + View
Carpinus fangiana Cfa009550 Cfa04 + View
Capsella rubella Carub.0008s1699 PTHR12537//PTHR12537:SF13 - RNA BINDING PROTEIN PUMILIO-RELATED // SUPPRESSOR PROTEIN MPT5 scaffold_8 + View
Davidia involucrata Dinv13480 GWHABJS00000007 - View
Eucalyptus grandis Eucgr.J01757 Chr10 + View
Eucalyptus grandis Eucgr.B03594 Chr02 + View
Eutrema salsugineum Thhalv10015278m.g PTHR12537:SF13 - SUPPRESSOR PROTEIN MPT5 scaffold_2 - View
Fragaria x ananassa FAN21G1029 Fvb3-2 - View
Fragaria vesca FvH4_3g45790 PTHR12537:SF13 - SUPPRESSOR PROTEIN MPT5 Fvb3 - View
Malus domestica MD03G1003000 pumilio 12 Chr03 + View
Malus domestica MD11G1002800 pumilio 12 Chr11 + View
Nelumbo nucifera Nn2g15873 chr2 - View
Prunus persica Prupe.6G002600 PTHR12537:SF13 - SUPPRESSOR PROTEIN MPT5 Pp06 + View
Papaver somniferum PSO384G2965 NC_039368.1 - View
Populus trichocarpa Potri.001G002600 PTHR12537//PTHR12537:SF13 - RNA BINDING PROTEIN PUMILIO-RELATED // SUPPRESSOR PROTEIN MPT5 Chr01 + View
Quercus lobata QL01p010635 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0083871 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0233400 chr13 - View
Salix brachista Sabra01G0001900 GWHAAZH00000001 + View
Sechium edule Sed0001015 LG08 + View
Trochodendron aralioides TAR369G1023 group18 - View
Vaccinium macrocarpon vmacro04263 Similar to APUM12: Pumilio homolog 12 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01025489001 chr6 + View