Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031912 unnamed protein product [Vitis vinifera] Contig68 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia38938 Lachesis_group17 + View
Actinidia chinensis Actinidia34752 Lachesis_group6 - View
Arabidopsis lyrata AL3G14510 scaffold_3 - View
Aquilegia oxysepala Aqoxy2G03669 CHR02 - View
Aquilegia oxysepala Aqoxy5G00213 CHR05 - View
Arabidopsis thaliana AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA recognition motif-related (InterPro:IPR015464)%3B BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1)%3B Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0%3B Bacteria - 989%3B Metazoa - 6848%3B Fungi - 1697%3B Plants - 2705%3B Viruses - 0%3B Other Eukaryotes - 1053 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0736G218 AmTr_v1.0_scaffold00067 + View
Brassica carinata BcaC05g30193 ChrC05 + View
Brassica carinata BcaC05g29937 ChrC05 + View
Brassica napus A05p42980 A05 + View
Brassica oleracea BolC5t34928H C5 + View
Brassica rapa BraA05t23042Z A05 + View
Cannabis sativa CANSAT54G2642 NC_044375.1 - View
Cicer arietinum L. Ca_10015_v3 Ca_LG4_v3 - View
Corylus avellana Haze_04435 Similar to UBP1B: Oligouridylate-binding protein 1B (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g08860 Putative uncharacterized protein chr2 - View
Citrus clementina Ciclev10021882m.g scaffold_3 - View
Carpinus fangiana Cfa006347 Cfa02 + View
Cardamine hirsuta CARHR078690 RNA-binding protein Chr3 - View
Citrullus lanatus ClCG11G010570 RNA-binding protein CG_Chr11 - View
Cucumis melo MELO3C008710.2 RNA-binding protein 42-like chr05 - View
Chenopodium quinoa AUR62004836 RBM42: RNA-binding protein 42 C_Quinoa_Scaffold_3820 + View
Chenopodium quinoa AUR62040925 Rbm42: RNA-binding protein 42 C_Quinoa_Scaffold_3641 + View
Capsella rubella Carub.0003s0366 KOG0226 - RNA-binding proteins scaffold_3 - View
Cucumis sativus L. CsaV3_2G009740 RNA-binding protein 42 chr2 + View
Davidia involucrata Dinv24683 GWHABJS00000009 + View
Durio zibethinus Duzib128G0961 NW_019168481.1 + View
Eutrema salsugineum Thhalv10021407m.g KOG0226 - RNA-binding proteins scaffold_13 + View
Fragaria x ananassa FAN05G1443 KOG0226 - RNA-binding proteins Fvb6-3 + View
Fragaria x ananassa FAN05G3813 KOG0226 - RNA-binding proteins Fvb6-3 - View
Fragaria x ananassa FAN09G1189 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6-2 + View
Fragaria x ananassa FAN14G1798 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6-1 + View
Fragaria vesca FvH4_6g01880 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6 - View
Gossypium hirsutum Gohir.D13G172900 KOG0226 - RNA-binding proteins D13 - View
Gossypium hirsutum Gohir.A13G167400 KOG0226 - RNA-binding proteins A13 - View
Gossypium hirsutum Gohir.D11G257800 KOG0226 - RNA-binding proteins D11 - View
Gossypium hirsutum Gohir.A11G247500 KOG0226 - RNA-binding proteins A11 - View
Glycine max Glyma.10G166200 KOG0226 - RNA-binding proteins Gm10 + View
Glycine max Glyma.20G223000 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Gm20 - View
Gossypium raimondii Gorai.007G276100 Chr07 - View
Lupinus albus Lalb_Chr02g0149101 Lalb_Chr02 + View
Lotus japonicus Lj5g0022615 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) chr5 + View
Lonicera japonica Lj2A42G39 GWHAAZE00000002 + View
Malus domestica MD12G1247000 RNA-binding (RRM/RBD/RNP motifs) family protein Chr12 + View
Malus domestica MD04G1229900 RNA-binding (RRM/RBD/RNP motifs) family protein Chr04 + View
Manihot esculenta Manes.09G148000 Chromosome09 - View
Medicago truncatula Medtr1g080150 RNA recognition motif, a.k.a. RRM, RBD protein chr1 - View
Nicotiana tabacum Nitab4.5_0003780g0080 Nucleotide-binding, alpha-beta plait, RNA recognition motif domain Nitab4.5_0003780 + View
Oryza sativa ssp. japonica Os02g0622500 Conserved hypothetical protein. chr02 - View
Petunia axillaris Peaxi162Scf00528g00119 RNA-binding protein 42 Peaxi162Scf00528 + View
Punica granatum PGR004G1803 NC_045131.1 + View
Prunus persica Prupe.6G350000 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Pp06 + View
Pisum sativum Psat6g142680 Nucleotide-binding + alpha-beta plait chr6LG2 - View
Papaver somniferum PSO832G1483 NC_039367.1 - View
Papaver somniferum PSO210G7560 NC_039359.1 - View
Populus trichocarpa Potri.013G046900 KOG0226 - RNA-binding proteins Chr13 + View
Populus trichocarpa Potri.019G018900 KOG0226 - RNA-binding proteins Chr19 + View
Rosa chinensis RcHm_v2.0_Chr3g0449621 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim09G0137200 chr09 - View
Salix brachista Sabra13G0042900 GWHAAZH00000013 + View
Solanum lycopersicum Solyc04g010000.3 RNA-binding protein 42 (AHRD V3.3 *** A0A2I4E3H6_9ROSI) SL4.0ch04 + View
Schrenkiella parvula Sp3g03350 KOG0226 - RNA-binding proteins ch3-1 - View
Solanum pennellii Sopen04g005130 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , RNA recognition motif-related | BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B Spenn-ch04 + View
Solanum pennellii Sopen05g033470 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , RNA recognition motif-related | BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B Spenn-ch05 - View
Trochodendron aralioides TAR633G1327 group2 - View
Trochodendron aralioides TAR362G0866 group17 + View
Theobroma cacao Thecc.05G271100 RNA-binding family protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104805782 RNA-binding protein 42-like NW_010961290.1 + View
Trifolium pratense TPR.G22331 Tp57577_TGAC_v2_LG1 + View
Vaccinium macrocarpon vmacro10364 Similar to RBM42: RNA-binding protein 42 (Bos taurus OX%3D9913) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1875 CM024071.1 + View
Vitis vinifera GSVIVG01023509001 chr14 - View