Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015210 9-cis-epoxycarotenoid dioxygenase 1 [Lycium barbarum] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G2560 LG-4 + View
Aethionema arabicum Aa31LG8G1710 LG-8 - View
Acer truncatum Atru.chr10.1203 chr10 - View
Actinidia chinensis Actinidia35179 Lachesis_group2 + View
Actinidia chinensis Actinidia04594 Lachesis_group5 - View
Actinidia chinensis Actinidia18843 Lachesis_group9 + View
Arabidopsis lyrata AL2G38760 scaffold_2 - View
Arabidopsis lyrata AL3G26820 scaffold_3 - View
Avicennia marina MSTRG.15006 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.6709 ScioBoG_102840_HRSCAF_103099 - View
Arabidopsis thaliana AT3G14440 nine-cis-epoxycarotenoid dioxygenase 3 Encodes 9-%3Ci%3Ecis%3C/i%3E-epoxycarotenoid dioxygenase%2C a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots%2C flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. nine-cis-epoxycarotenoid dioxygenase 3 (NCED3)%3B CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294)%3B BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1)%3B Has 2945 Blast hits to 2901 proteins in 493 species: Archae - 16%3B Bacteria - 796%3B Metazoa - 281%3B Fungi - 204%3B Plants - 893%3B Viruses - 0%3B Other Eukaryotes - 755 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 Encodes 9-cis-epoxycarotenoid dioxygenase%2C a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. nine-cis-epoxycarotenoid dioxygenase 9 (NCED9)%3B CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294)%3B BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 3 (TAIR:AT3G14440.1)%3B Has 2892 Blast hits to 2853 proteins in 497 species: Archae - 16%3B Bacteria - 810%3B Metazoa - 240%3B Fungi - 201%3B Plants - 889%3B Viruses - 0%3B Other Eukaryotes - 736 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC03g15809 ChrC03 - View
Brassica carinata BcaC08g47413 ChrC08 - View
Brassica carinata BcaC05g29082 ChrC05 + View
Brassica carinata BcaB06g25384 ChrB06 + View
Brassica napus A05p34940 A05 + View
Brassica napus C06p52330 C06 - View
Brassica napus A07p43650 A07 - View
Brassica napus C05p52880 C05 + View
Brassica napus A01p39270 A01 + View
Brassica oleracea BolC5t33966H C5 + View
Brassica oleracea BolC6t40253H C6 - View
Brassica rapa BraA01t03970Z A01 + View
Brassica rapa BraA05t22308Z A05 + View
Brassica rapa BraA07t31877Z A07 - View
Cannabis sativa CANSAT56G3902 NC_044371.1 - View
Corylus avellana Haze_05615 Similar to NCED2: 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic (Solanum lycopersicum OX%3D4081) 2 + View
Corylus avellana Haze_08498 Similar to NCED1: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic (Phaseolus vulgaris OX%3D3885) 4 + View
Coffea canephora Cc05_g10210 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic chr5 - View
Citrus clementina Ciclev10019364m.g scaffold_3 - View
Carpinus fangiana Cfa019450 Cfa08 - View
Cardamine hirsuta CARHR071900 9-cis-epoxycarotenoid dioxygenase, putative Chr2 - View
Carya illinoinensis CiPaw.10G091100 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) Chr10 - View
Carya illinoinensis CiPaw.09G122600 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) Chr09 - View
Citrullus lanatus ClCG07G010550 9-cis-epoxycarotenoid dioxygenase CG_Chr07 + View
Carica papaya Cpa.g.sc77.99 supercontig_77 + View
Chenopodium quinoa AUR62030185 NCED1: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic C_Quinoa_Scaffold_1747 - View
Capsella rubella Carub.0003s1417 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED scaffold_3 - View
Capsella rubella Carub.0002s2529 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED scaffold_2 - View
Cucumis sativus L. CsaV3_4G007760 9-cis-epoxycarotenoid dioxygenase chr4 - View
Daucus carota DCAR_021059 9-cis-epoxycarotenoid dioxygenase DCARv2_Chr6 - View
Daucus carota DCAR_017563 9-cis-epoxycarotenoid dioxygenase DCARv2_Chr5 + View
Daucus carota DCAR_013799 9-cis-epoxycarotenoid dioxygenase DCARv2_Chr4 - View
Daucus carota DCAR_027908 9-cis-epoxycarotenoid dioxygenase DCARv2_Chr8 + View
Davidia involucrata Dinv13307 GWHABJS00000001 - View
Davidia involucrata Dinv26663 GWHABJS00000013 + View
Durio zibethinus Duzib235G0823 NW_019167982.1 - View
Durio zibethinus Duzib187G1903 NW_019167860.1 + View
Durio zibethinus Duzib268G0173 NW_019168270.1 + View
Durio zibethinus Duzib213G0928 NW_019167993.1 + View
Erigeron canadensis ECA234G3656 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA236G3052 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.F01409 Chr06 + View
Eucalyptus grandis Eucgr.F03199 Chr06 - View
Eucalyptus grandis Eucgr.D00291 Chr04 + View
Erythranthe guttata Migut.M00656 scaffold_13 + View
Erythranthe guttata Migut.H02072 scaffold_8 - View
Eutrema salsugineum Thhalv10020337m.g PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED scaffold_13 + View
Eutrema salsugineum Thhalv10019707m.g PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED scaffold_9 + View
Fragaria x ananassa FAN21G3899 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Fvb3-2 + View
Fragaria x ananassa FAN16G1098 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Fvb3-3 + View
Fragaria x ananassa FAN16G0467 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) Fvb3-3 - View
Fragaria x ananassa FAN25G2478 PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED Fvb3-1 - View
Fragaria x ananassa FAN11G0454 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Fvb3-4 - View
Fragaria vesca FvH4_3g16730 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Fvb3 + View
Gossypium hirsutum Gohir.A01G041300 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) A01 - View
Gossypium hirsutum Gohir.D13G156600 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) D13 + View
Gossypium hirsutum Gohir.D01G028600 PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED D01 - View
Gossypium hirsutum Gohir.A13G152200 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) A13 + View
Glycine max Glyma.08G176300 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Gm08 - View
Glycine max Glyma.15G250100 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Gm15 + View
Gossypium raimondii Gorai.013G177100 Chr13 + View
Gossypium raimondii Gorai.002G038100 Chr02 - View
Helianthus annuus HanXRQChr11g0329931 Putative carotenoid oxygenase HanXRQChr11 + View
Lupinus albus Lalb_Chr25g0285361 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) Lalb_Chr25 - View
Lotus japonicus Lj3g0015737 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) chr3 + View
Lonicera japonica Lj8C141T9 GWHAAZE00000008 - View
Lonicera japonica Lj1P809T13 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_101981 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_7_100040 Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_5_120740 PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED Lsat_1_v8_lg_5 + View
Magnolia biondii MBI18_g24471_MAGBIO AED:0.02 Chr18 + View
Manihot esculenta Manes.15G102000 Chromosome15 - View
Manihot esculenta Manes.17G071200 Chromosome17 + View
Manihot esculenta Manes.15G122400 Chromosome15 + View
Medicago truncatula Medtr2g070460 9-cis-epoxycarotenoid dioxygenase chr2 - View
Petunia axillaris Peaxi162Scf00111g00077 nine-cis-epoxycarotenoid dioxygenase 3 Peaxi162Scf00111 - View
Punica granatum PGR083G1555 NC_045133.1 + View
Punica granatum PGR031G1042 NC_045127.1 - View
Prunus persica Prupe.4G082000 PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED Pp04 + View
Prunus persica Prupe.4G150100 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Pp04 + View
Papaver somniferum PSO675G1537 NC_039358.1 + View
Phaseolus vulgaris Phvul.005G051600 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) Chr05 + View
Quercus lobata QL04p070671 4 + View
Quercus lobata QL05p057609 5 - View
Rhododendron simsii Rhsim06G0184500 chr06 - View
Rhododendron simsii Rhsim04G0033500 chr04 + View
Striga asiatica SGA_v2.0_scaffold4G02136 scaffold4 + View
Striga asiatica SGA_v2.0_scaffold73G24355 scaffold73 + View
Salvia bowleyana SalBow8G1888 GWHASIU00000004 - View
Salvia bowleyana SalBow7G3817 GWHASIU00000005 + View
Salvia bowleyana SalBow7G0837 GWHASIU00000005 - View
Solanum lycopersicum Solyc07g056570.1 notabilis SL4.0ch07 - View
Schrenkiella parvula Sp3g12750 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED ch3-1 - View
Schrenkiella parvula Sp5g33490 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED ch5-7 - View
Solanum pennellii Sopen07g029920 Encodes 9- Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400027633 9-cis-epoxycarotenoid dioxygenase ST4.03ch07 - View
Trochodendron aralioides TAR626G1577 group3 + View
Trochodendron aralioides TAR627G1053 group6 - View
Theobroma cacao Thecc.06G149100 Nine-cis-epoxycarotenoid dioxygenase 5 Chromosome_6 - View
Theobroma cacao Thecc.07G147400 Nine-cis-epoxycarotenoid dioxygenase 3 Chromosome_7 + View
Tarenaya hassleriana THA.LOC104822605 9-cis-epoxycarotenoid dioxygenase NCED3%2C chloroplastic-like NW_010966725.1 + View
Tarenaya hassleriana THA.LOC104812288 9-cis-epoxycarotenoid dioxygenase NCED9%2C chloroplastic-like NW_010965372.1 - View
Tripterygium wilfordii TWI73G0344 NC_052232.1 - View
Tripterygium wilfordii TWI39G0890 NC_052250.1 - View
Vaccinium macrocarpon vmacro12018 Similar to NCED1: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic (Solanum lycopersicum OX%3D4081) chr11_Vaccinium_macrocarpon_Stevens_v1 + View