Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018824 hypothetical protein JCGZ_15100 [Jatropha curcas] Chr11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G18050 LG-5 + View
Acer truncatum Atru.chr6.3533 chr6 - View
Actinidia chinensis Actinidia23352 Lachesis_group20 + View
Actinidia chinensis Actinidia23799 Lachesis_group9 - View
Arabidopsis lyrata AL9U11650 scaffold_9 + View
Arabidopsis lyrata AL3G18810 scaffold_3 + View
Avicennia marina MSTRG.18501 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.17966 ScioBoG_19834_HRSCAF_19925 - View
Amaranthus hybridus Ah.02g111070 AmaHy_arrow1_Scaffold_2 - View
Arabidopsis thaliana AT3G07490 ARF-GAP domain 11 A member of ARF GAP domain (AGD)%2C A thaliana has 15 members%2C grouped into four classes. ARF-GAP domain 11 (AGD11)%3B FUNCTIONS IN: calcium ion binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080)%2C EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1)%3B Has 25143 Blast hits to 16842 proteins in 1503 species: Archae - 3%3B Bacteria - 170%3B Metazoa - 10890%3B Fungi - 4135%3B Plants - 6085%3B Viruses - 0%3B Other Eukaryotes - 3860 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT4G12860 EF hand calcium-binding protein family unfertilized embryo sac 14 (UNE14)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: double fertilization forming a zygote and endosperm%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: leaf whorl%2C male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080)%2C EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: ARF-GAP domain 11 (TAIR:AT3G07490.1)%3B Has 24675 Blast hits to 17481 proteins in 1590 species: Archae - 2%3B Bacteria - 226%3B Metazoa - 10763%3B Fungi - 4223%3B Plants - 5412%3B Viruses - 0%3B Other Eukaryotes - 4049 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC07g37424 ChrC07 + View
Brassica carinata BcaC02g09458 ChrC02 + View
Brassica carinata BcaC05g29540 ChrC05 + View
Brassica carinata BcaB03g14698 ChrB03 - View
Brassica carinata BcaC01g04280 ChrC01 - View
Brassica napus A03p35280 A03 + View
Brassica napus A08p07300 A08 + View
Brassica napus A05p40720 A05 - View
Brassica napus C03p42900 C03 + View
Brassica napus C05p59830 C05 - View
Brassica oleracea BolC1t05547H C1 - View
Brassica oleracea BolC3t16558H C3 + View
Brassica oleracea BolC5t34637H C5 - View
Brassica oleracea BolC4t25874H C4 + View
Brassica rapa BraA05t22803Z A05 - View
Brassica rapa BraA01t04378Z A01 - View
Brassica rapa BraA03t12706Z A03 + View
Brassica rapa BraA08t32746Z A08 + View
Beta vulgaris EL10Ac5g10596 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G874.35 PGAv.1.6.scaffold874 + View
Cannabis sativa CANSAT01G0805 NC_044373.1 - View
Corylus avellana Haze_03575 Similar to CML3: Calmodulin-like protein 3 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc01_g16010 Calmodulin-like protein 3 chr1 - View
Citrus clementina Ciclev10017706m.g scaffold_2 - View
Cardamine hirsuta CARHR082140 Calmodulin-like protein Chr3 + View
Cardamine hirsuta CARHR218190 Calmodulin-like protein Chr7 + View
Carya illinoinensis CiPaw.14G045100 PTHR10891//PTHR10891:SF586 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 6-RELATED Chr14 - View
Carya illinoinensis CiPaw.13G058200 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Chr13 - View
Carica papaya Cpa.g.sc8.56 supercontig_8 - View
Chenopodium quinoa AUR62008075 CML3: Calmodulin-like protein 3 C_Quinoa_Scaffold_3422 - View
Capsella rubella Carub.0007s2996 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED scaffold_7 + View
Davidia involucrata Dinv28804 GWHABJS00000010 - View
Davidia involucrata Dinv35453 GWHABJS00000007 + View
Durio zibethinus Duzib211G0220 NW_019168049.1 + View
Durio zibethinus Duzib138G1141 NW_019167893.1 + View
Durio zibethinus Duzib133G0071 NW_019167938.1 + View
Erigeron canadensis ECA248G2835 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA247G1544 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.H00711 Chr08 - View
Erythranthe guttata Migut.D00745 scaffold_4 + View
Erythranthe guttata Migut.N00671 scaffold_14 - View
Eutrema salsugineum Thhalv10021694m.g PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED scaffold_13 - View
Fragaria x ananassa FAN27G0169 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Fvb2-1 - View
Fragaria x ananassa FAN15G1859 PTHR10891//PTHR10891:SF586 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 6-RELATED Fvb2-4 + View
Fragaria x ananassa FAN24G2964 PTHR10891//PTHR10891:SF586 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 6-RELATED Fvb2-2 + View
Fragaria vesca FvH4_2g17620 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Fvb2 - View
Gossypium hirsutum Gohir.D09G204500 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 D09 + View
Gossypium hirsutum Gohir.D07G167700 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED D07 - View
Gossypium hirsutum Gohir.A09G211050 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 A09 + View
Gossypium hirsutum Gohir.A02G012700 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 A02 - View
Gossypium hirsutum Gohir.D07G202500 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED D07 - View
Gossypium hirsutum Gohir.A07G158700 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED A07 - View
Gossypium hirsutum Gohir.A11G143250 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED A11 + View
Gossypium hirsutum Gohir.D02G013400 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 D02 - View
Gossypium hirsutum Gohir.A07G196100 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED A07 - View
Gossypium raimondii Gorai.005G016900 Chr05 - View
Gossypium raimondii Gorai.006G228400 Chr06 + View
Gossypium raimondii Gorai.001G227900 Chr01 - View
Gossypium raimondii Gorai.007G160500 Chr07 + View
Gossypium raimondii Gorai.N002400 scaffold_14 + View
Helianthus annuus HanXRQChr08g0231841 Putative EF-hand domain pair HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0161F.1_g071520 Hma1.2p1_0161F.1 + View
Lonicera japonica Lj2P1114T31 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_9_16500 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Lsat_1_v8_lg_9 - View
Magnolia biondii MBI03_g33916_MAGBIO AED:0.11 Chr03 + View
Malus domestica MD05G1156600 ARF-GAP domain 11 Chr05 - View
Malus domestica MD10G1150400 ARF-GAP domain 11 Chr10 - View
Manihot esculenta Manes.13G055366 Chromosome13 + View
Manihot esculenta Manes.12G059700 Chromosome12 + View
Nicotiana tabacum Nitab4.5_0001348g0020 EF-Hand 1, calcium-binding site, EF-hand domain pair, EF-hand domain Nitab4.5_0001348 + View
Petunia axillaris Peaxi162Scf01242g00009 EF hand calcium-binding protein family Peaxi162Scf01242 - View
Punica granatum PGR083G1403 NC_045133.1 - View
Prunus persica Prupe.8G188800 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Pp08 - View
Populus trichocarpa Potri.002G239100 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Chr02 + View
Rosa chinensis RcHm_v2.0_Chr6g0282601 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim01G0248200 chr01 - View
Rhododendron simsii Rhsim13G0053700 chr13 + View
Salix brachista Sabra02G0182100 GWHAAZH00000002 + View
Simmondsia chinensis Sc17g0001610 GWHAASQ00000017 - View
Simmondsia chinensis Sc05g0001670 GWHAASQ00000005 - View
Solanum lycopersicum Solyc06g083000.1 Calmodulin-like protein 5 (AHRD V3.3 *** A0A2G2WMY5_CAPBA) SL4.0ch06 - View
Schrenkiella parvula Sp7g09590 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED ch7-4 - View
Schrenkiella parvula Sp3g06400 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED ch3-1 + View
Solanum pennellii Sopen06g034390 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. | ARF-GAP domain 11 (AGD11) | FUNCTIONS IN: calcium ion binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Parvalbumin , EF-Hand 1, calcium-binding site , EF-HAND 2 , EF-hand-like domain , Calcium-binding EF-hand , EF-hand | BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG402027685 Calcium-binding protein ST4.03ch06 - View
Theobroma cacao Thecc.01G209500 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104819004 calmodulin-like protein 3 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104822464 calmodulin-like protein 3 NW_010966665.1 - View
Tripterygium wilfordii TWI36G0484 NC_052237.1 - View
Tripterygium wilfordii TWI18G1275 NC_052241.1 + View
Tripterygium wilfordii TWI75G0678 NC_052253.1 - View
Vaccinium macrocarpon vmacro02827 Similar to CML3: Calmodulin-like protein 3 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View