Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023872 unnamed protein product [Coffea canephora] Chr4 + View
CSS0044171 hypothetical protein CICLE_v10031403mg [Citrus clementina] Chr1 + View
CSS0012900 PREDICTED: protein PMR5 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G23020 LG-1 - View
Acer truncatum Atru.chr8.2266 chr8 + View
Acer truncatum Atru.chr3.4178 chr3 - View
Acer truncatum Atru.chr12.60 chr12 + View
Avicennia marina MSTRG.10214 ScioBoG_13798_HRSCAF_13862 - View
Amaranthus hybridus Ah.12g058770 AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy2G00851 CHR02 + View
Aquilegia oxysepala Aqoxy4G02507 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AN7RS9 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.BP1V8D PTHR32285:SF14 - PROTEIN PMR5-RELATED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.710ZX6 PTHR32285:SF14 - PROTEIN PMR5-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VG2ADC PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MIA0YM PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.95EUB8 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W4QMQ1 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 34 (TBL34)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 35 (TAIR:AT5G01620.2)%3B Has 1346 Blast hits to 1317 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 1344%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G01360 trichome birefringence-like protein (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 3 (TBL3)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G55990.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0681G336 AmTr_v1.0_scaffold00007 + View
Brassica carinata BcaC01g05549 ChrC01 - View
Brassica carinata BcaB01g06226 ChrB01 - View
Brassica oleracea BolC2t06019H C2 + View
Brassica rapa BraA02t04693Z A02 + View
Brassica rapa BraA03t11355Z A03 + View
Beta vulgaris EL10Ac2g04848 PTHR32285:SF10 - PROTEIN ESKIMO 1 Chr2_EL10_PGA_scaffold6 + View
Beta vulgaris EL10Ac5g12544 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Chr5_EL10_PGA_scaffold2 - View
Cannabis sativa CANSAT35G0083 NC_044378.1 + View
Cicer arietinum L. Ca_14958_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_07688_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_07654_v3 Ca_LG3_v3 + View
Corylus avellana Haze_24353 Similar to PMR5: Protein PMR5 (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_17239 Similar to ESK1: Protein ESKIMO 1 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g06330 Plant protein of unknown function (DUF828) chr2 - View
Coffea canephora Cc01_g14410 Plant protein of unknown function (DUF828) chr1 + View
Citrus clementina Ciclev10028623m.g scaffold_8 + View
Citrus clementina Ciclev10011779m.g scaffold_6 + View
Citrus clementina Ciclev10031403m.g scaffold_4 + View
Citrus clementina Ciclev10013527m.g scaffold_6 + View
Ceratophyllum demersum CDE12G0483 10 + View
Carpinus fangiana Cfa017187 Cfa07 - View
Carpinus fangiana Cfa001306 Cfa01 - View
Carpinus fangiana Cfa011719 Cfa04 + View
Cardamine hirsuta CARHR211740 Protein trichome birefringence-like 33 Chr6 - View
Carya illinoinensis CiPaw.02G193400 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Chr02 + View
Carya illinoinensis CiPaw.10G160400 PTHR32285:SF11 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 34 Chr10 + View
Carya illinoinensis CiPaw.14G057700 PTHR32285:SF14 - PROTEIN PMR5-RELATED Chr14 - View
Carya illinoinensis CiPaw.09G211000 PTHR32285//PTHR32285:SF7//PTHR34966 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 // FAMILY NOT NAMED Chr09 + View
Citrullus lanatus ClCG03G000630 TRICHOME BIREFRINGENCE-LIKE 45 LENGTH=398 CG_Chr03 - View
Corchorus olitorius COL.COLO4_14510 hypothetical protein AWUE01015433.1 - View
Carica papaya Cpa.g.sc11.96 supercontig_11 - View
Carica papaya Cpa.g.sc19.162 supercontig_19 - View
Chenopodium quinoa AUR62022901 ESK1: Protein ESKIMO 1 C_Quinoa_Scaffold_3378 + View
Chenopodium quinoa AUR62012266 ESK1: Protein ESKIMO 1 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62030483 TBL3: Protein trichome birefringence-like 3 C_Quinoa_Scaffold_3973 - View
Chenopodium quinoa AUR62030810 TBL3: Protein trichome birefringence-like 3 C_Quinoa_Scaffold_2000 + View
Cucumis sativus L. CsaV3_4G026310 Protein trichome birefringence-like chr4 + View
Cucumis sativus L. CsaV3_1G036320 Protein trichome birefringence-like chr1 + View
Daucus carota DCAR_024011 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv21744 GWHABJS00000004 - View
Davidia involucrata Dinv03094 GWHABJS00000007 + View
Davidia involucrata Dinv28659 GWHABJS00000010 + View
Davidia involucrata Dinv03020 GWHABJS00000015 + View
Durio zibethinus Duzib106G1335 NW_019168492.1 + View
Durio zibethinus Duzib168G1888 NW_019168159.1 - View
Durio zibethinus Duzib093G1960 NW_019167937.1 + View
Erigeron canadensis ECA248G1439 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.B02240 Chr02 - View
Eucalyptus grandis Eucgr.K02955 Chr11 - View
Eucalyptus grandis Eucgr.A00530 Chr01 - View
Erythranthe guttata Migut.F00671 scaffold_6 - View
Erythranthe guttata Migut.L02024 scaffold_12 + View
Eutrema salsugineum Thhalv10017691m.g PTHR32285:SF11 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 34 scaffold_10 + View
Fragaria x ananassa FAN11G3378 PTHR32285:SF14 - PROTEIN PMR5-RELATED Fvb3-4 - View
Fragaria x ananassa FAN02G2720 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6-4 - View
Fragaria x ananassa FAN25G2765 PTHR32285:SF14 - PROTEIN PMR5-RELATED Fvb3-1 - View
Fragaria x ananassa FAN01G0145 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Fvb7-4 - View
Fragaria x ananassa FAN16G0918 PTHR32285//PTHR32285:SF14 - FAMILY NOT NAMED // PROTEIN PMR5-RELATED Fvb3-3 + View
Fragaria x ananassa FAN05G2456 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6-3 + View
Fragaria x ananassa FAN10G1989 PTHR32285:SF10 - PROTEIN ESKIMO 1 Fvb7-1 - View
Fragaria x ananassa FAN09G2738 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6-2 - View
Fragaria x ananassa FAN14G2010 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6-1 + View
Fragaria x ananassa FAN14G5680 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6-1 + View
Fragaria x ananassa FAN03G0221 PTHR32285:SF10 - PROTEIN ESKIMO 1 Fvb7-3 + View
Fragaria x ananassa FAN06G3320 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Fvb7-2 + View
Fragaria vesca FvH4_3g38960 PTHR32285//PTHR32285:SF14 - FAMILY NOT NAMED // PROTEIN PMR5-RELATED Fvb3 + View
Fragaria vesca FvH4_7g24620 PTHR32285:SF10 - PROTEIN ESKIMO 1 Fvb7 + View
Fragaria vesca FvH4_6g11230 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6 - View
Gossypium hirsutum Gohir.D10G250000 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 D10 - View
Gossypium hirsutum Gohir.A04G092300 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 A04 + View
Gossypium hirsutum Gohir.A10G238100 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 A10 - View
Gossypium hirsutum Gohir.D04G131600 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 D04 + View
Glycine max Glyma.18G203100 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Gm18 + View
Glycine max Glyma.03G056100 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Gm03 - View
Glycine max Glyma.18G061200 PTHR32285:SF14 - PROTEIN PMR5-RELATED Gm18 - View
Glycine max Glyma.07G152000 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Gm07 + View
Glycine max Glyma.18G024000 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 Gm18 - View
Gossypium raimondii Gorai.011G290400 Chr11 - View
Gossypium raimondii Gorai.012G115400 Chr12 + View
Gossypium raimondii Gorai.012G077200 Chr12 + View
Hydrangea macrophylla Hma1.2p1_0362F.1_g136430 Hma1.2p1_0362F.1 + View
Lupinus albus Lalb_Chr19g0124471 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Lalb_Chr19 - View
Lupinus albus Lalb_Chr01g0023141 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Lalb_Chr01 + View
Lotus japonicus Lj3g0008103 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 chr3 + View
Lotus japonicus Lj6g0002779 PTHR32285:SF14 - PROTEIN PMR5-RELATED chr6 - View
Lonicera japonica Lj1A131T61 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_5_150801 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_5_173120 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI03_g07325_MAGBIO AED:0.08 Chr03 - View
Malus domestica MD03G1066200 Plant protein of unknown function (DUF828) Chr03 + View
Malus domestica MD01G1154500 Plant protein of unknown function (DUF828) Chr01 + View
Malus domestica MD07G1223300 Plant protein of unknown function (DUF828) Chr07 + View
Malus domestica MD11G1070900 Plant protein of unknown function (DUF828) Chr11 + View
Malus domestica MD12G1171500 Plant protein of unknown function (DUF828) Chr12 + View
Manihot esculenta Manes.08G093700 Chromosome08 + View
Manihot esculenta Manes.09G107400 Chromosome09 + View
Manihot esculenta Manes.07G131000 Chromosome07 + View
Medicago truncatula Medtr3g070900 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr3 + View
Medicago truncatula Medtr7g068920 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr7 + View
Medicago truncatula Medtr4g016940 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr4 + View
Nelumbo nucifera Nn2g10879 chr2 + View
Nelumbo nucifera Nn2g13156 chr2 + View
Nicotiana tabacum Nitab4.5_0000119g0090 PC-Esterase Nitab4.5_0000119 - View
Oryza sativa ssp. japonica Os03g0290900 Protein of unknown function DUF231, plant domain containing protein. chr03 + View
Petunia axillaris Peaxi162Scf00014g00125 TRICHOME BIREFRINGENCE-LIKE 28 Peaxi162Scf00014 - View
Petunia axillaris Peaxi162Scf00009g01233 TRICHOME BIREFRINGENCE-LIKE 35 Peaxi162Scf00009 - View
Punica granatum PGR031G2147 NC_045127.1 - View
Prunus persica Prupe.6G279700 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Pp06 + View
Prunus persica Prupe.6G054900 Pp06 - View
Prunus persica Prupe.2G251500 Pp02 + View
Pisum sativum Psat7g244800 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p chr7LG7 - View
Papaver somniferum PSO339G6591 NC_039366.1 - View
Papaver somniferum PSO339G4848 NC_039366.1 + View
Papaver somniferum PSO801G0068 NW_020628818.1 + View
Populus trichocarpa Potri.016G119100 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Chr16 - View
Populus trichocarpa Potri.008G069900 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Chr08 + View
Phaseolus vulgaris Phvul.008G096800 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Chr08 - View
Phaseolus vulgaris Phvul.008G220700 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 Chr08 - View
Phaseolus vulgaris Phvul.006G069200 PTHR32285:SF14 - PROTEIN PMR5-RELATED Chr06 + View
Phaseolus vulgaris Phvul.010G075800 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Chr10 + View
Quercus lobata QL01p038822 1 + View
Quercus lobata QL07p035131 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0462711 RcHm_v2.0_Chr3 - View
Rosa chinensis RcHm_v2.0_Chr5g0070131 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim05G0217200 chr05 + View
Striga asiatica SGA_v2.0_scaffold240G44085 scaffold240 - View
Salvia bowleyana SalBow5G3942 GWHASIU00000003 - View
Salix brachista Sabra16G0115000 GWHAAZH00000016 - View
Salix brachista Sabra08G0051500 GWHAAZH00000008 + View
Sechium edule Sed0005825 LG14 - View
Solanum lycopersicum Solyc09g005630.3 Protein trichome birefringence-like 3 (AHRD V3.3 *** A0A1U8EDH5_CAPAN) SL4.0ch09 + View
Schrenkiella parvula Sp6g40670 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 ch6-6 - View
Schrenkiella parvula Sp4g20650 PTHR32285:SF11 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 34 ch4-6 + View
Solanum pennellii Sopen09g001530 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 3 (TBL3) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG401004451 Conserved gene of unknown function ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400011034 Conserved gene of unknown function ST4.03ch10 - View
Selenicereus undatus Hund13876 Scaffold_33679 + View
Selenicereus undatus Hund14867 Scaffold_33677 + View
Selenicereus undatus Hund15920 Scaffold_33677 - View
Trochodendron aralioides TAR623G1046 group7 + View
Trochodendron aralioides TAR369G0549 group18 - View
Trochodendron aralioides TAR636G1661 group1 - View
Trochodendron aralioides TAR633G2443 group2 + View
Theobroma cacao Thecc.05G013500 Uncharacterized protein Chromosome_5 - View
Theobroma cacao Thecc.10G014600 Uncharacterized protein Chromosome_10 - View
Tarenaya hassleriana THA.LOC104827460 protein trichome birefringence-like 3 NW_010967707.1 - View
Tripterygium wilfordii TWI77G0799 NC_052236.1 + View
Tripterygium wilfordii TWI09G1090 NC_052245.1 - View
Vaccinium macrocarpon vmacro20293 Similar to TBL3: Protein trichome birefringence-like 3 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G0938 CM024075.1 - View
Vigna mungo VMungo1383G3605 CM024070.1 - View
Vigna mungo VMungo0647G1548 CM024073.1 + View
Vitis vinifera GSVIVG01011180001 chr8 + View
Vitis vinifera GSVIVG01024714001 chr6 + View
Vitis vinifera GSVIVG01032800001 chr13 + View
Zea mays Zm00001eb013440 Zm00001e001317 Protein ESKIMO 1 1 + View