Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0030557 PREDICTED: dof zinc finger protein DOF4.6-like isoform X1 [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G15820 LG-10 + View
Aethionema arabicum Aa31LG1G27990 LG-1 + View
Aethionema arabicum Aa31LG5G1000 LG-5 + View
Acer truncatum Atru.chr5.708 chr5 + View
Acer truncatum Atru.chr9.1917 chr9 - View
Actinidia chinensis Actinidia28109 Lachesis_group16 + View
Actinidia chinensis Actinidia06132 Lachesis_group21 - View
Arabidopsis lyrata AL4G46020 scaffold_4 + View
Arabidopsis lyrata AL6G52450 scaffold_6 + View
Avicennia marina MSTRG.20913 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.13726 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.17358 ScioBoG_19743_HRSCAF_19834 + View
Amaranthus hybridus Ah.05g179330 AmaHy_arrow1_Scaffold_5 + View
Amaranthus hybridus Ah.12g053010 Dof zinc finger protein DOF4.6 (AtDOF4.6) AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy7G00044 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P7BG5E PF02701 - Dof domain, zinc finger (zf-Dof) arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5HWL40 PF02701 - Dof domain, zinc finger (zf-Dof) arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT4G00940 Dof-type zinc finger DNA-binding family protein Dof-type zinc finger DNA-binding family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.3)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT2G46590 Dof-type zinc finger DNA-binding family protein encodes a protein containing Dof zinc finger motifs. expression is limited to vascular system of the mother plant. recessive mutation is inherited as maternal-effect and expression is not detected in the embryo. mutants are defective in seed germination. mutants are more dependent on light and cold treatment and less sensitive to gibberellin during seed germination. DOF AFFECTING GERMINATION 2 (DAG2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: response to cold%2C response to light stimulus%2C seed germination%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.4)%3B Has 2459 Blast hits to 1971 proteins in 113 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 102%3B Fungi - 58%3B Plants - 1098%3B Viruses - 0%3B Other Eukaryotes - 1195 (source: NCBI BLink). DOF AFFECTING GERMINATION 2 (DAG2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.4)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC02g10258 ChrC02 + View
Brassica carinata BcaB02g08139 ChrB02 - View
Brassica carinata BcaC01g05059 ChrC01 - View
Brassica carinata BcaC09g50916 ChrC09 - View
Brassica carinata BcaC08g45174 ChrC08 + View
Brassica napus A05p01190 A05 - View
Brassica napus C04p01350 C04 - View
Brassica napus A09p53880 A09 + View
Brassica napus C08p36680 C08 + View
Brassica napus A03p25720 A03 + View
Brassica napus A04p34490 A04 + View
Brassica oleracea BolC1t01854H C1 + View
Brassica oleracea BolC6t37963H C6 + View
Brassica oleracea BolC4t21788H C4 - View
Brassica oleracea BolC9t53032H C9 + View
Brassica oleracea BolC8t51250H C8 + View
Brassica rapa BraA05t19121Z A05 - View
Brassica rapa BraA04t15807Z A04 - View
Brassica rapa BraA09t40803Z A09 + View
Beta vulgaris EL10Ac1g00234 PF02701 - Dof domain, zinc finger (zf-Dof) Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G1415.16 PGAv.1.6.scaffold1415 - View
Capsicum annuum CAN.G567.69 PGAv.1.6.scaffold567 + View
Cicer arietinum L. Ca_09522_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_23513_v3 Ca_LG7_v3 - View
Corylus avellana Haze_15683 Similar to DOF2.5: Dof zinc finger protein DOF2.5 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_09136 Similar to DOF4.6: Dof zinc finger protein DOF4.6 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc02_g01210 Putative Dof zinc finger protein DOF4.6 chr2 - View
Coffea canephora Cc02_g39630 Putative Dof zinc finger protein DOF3.7 chr2 + View
Coffea canephora Cc08_g16560 Putative Dof zinc finger protein DOF4.6 chr8 + View
Citrus clementina Ciclev10021521m.g scaffold_3 - View
Citrus clementina Ciclev10020725m.g scaffold_3 - View
Ceratophyllum demersum CDE12G0889 10 + View
Carpinus fangiana Cfa003777 Cfa01 - View
Carpinus fangiana Cfa016203 Cfa06 - View
Carpinus fangiana Cfa011949 Cfa05 - View
Cardamine hirsuta CARHR172180 Dof zinc finger protein 2 Chr5 + View
Cardamine hirsuta CARHR141940 Dof zinc finger protein Chr4 + View
Cardamine hirsuta CARHR249400 Dof zinc finger protein 2 Chr8 + View
Carya illinoinensis CiPaw.01G078400 PF02701 - Dof domain, zinc finger (zf-Dof) Chr01 + View
Carya illinoinensis CiPaw.12G079500 PF02701 - Dof domain, zinc finger (zf-Dof) Chr12 - View
Carya illinoinensis CiPaw.02G042000 PF02701 - Dof domain, zinc finger (zf-Dof) Chr02 + View
Carya illinoinensis CiPaw.11G114900 PF02701 - Dof domain, zinc finger (zf-Dof) Chr11 - View
Citrullus lanatus ClCG10G008290 Dof zinc finger protein CG_Chr10 + View
Citrullus lanatus ClCG01G000270 Dof zinc finger protein CG_Chr01 - View
Cucumis melo MELO3C006008.2 dof zinc finger protein DOF3.7 chr06 - View
Carica papaya Cpa.g.sc3.115 supercontig_3 + View
Chenopodium quinoa AUR62007029 DOF4.6: Dof zinc finger protein DOF4.6 C_Quinoa_Scaffold_1971 + View
Chenopodium quinoa AUR62004520 DOF4.6: Dof zinc finger protein DOF4.6 C_Quinoa_Scaffold_4250 - View
Chenopodium quinoa AUR62022735 DOF4.6: Dof zinc finger protein DOF4.6 C_Quinoa_Scaffold_1870 + View
Capsella rubella Carub.0004s2931 PF02701 - Dof domain, zinc finger (zf-Dof) scaffold_4 + View
Capsella rubella Carub.0006s3598 PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED scaffold_6 - View
Cucumis sativus L. CsaV3_3G007900 Dof zinc finger protein chr3 - View
Daucus carota DCAR_006979 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv35358 GWHABJS00000009 - View
Davidia involucrata Dinv32610 GWHABJS00000020 + View
Davidia involucrata Dinv09791 GWHABJS00000017 + View
Davidia involucrata Dinv29250 GWHABJS00000004 - View
Davidia involucrata Dinv34226 GWHABJS00000016 + View
Durio zibethinus Duzib205G0450 NW_019168381.1 + View
Durio zibethinus Duzib084G0390 NW_019167827.1 + View
Durio zibethinus Duzib084G0832 NW_019167827.1 - View
Durio zibethinus Duzib205G0691 NW_019168381.1 + View
Durio zibethinus Duzib068G0928 NW_019167838.1 + View
Durio zibethinus Duzib138G1651 NW_019167893.1 + View
Durio zibethinus Duzib133G1568 NW_019167938.1 + View
Erigeron canadensis ECA236G2000 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.E00037 Chr05 - View
Erythranthe guttata Migut.B01894 scaffold_2 + View
Eutrema salsugineum Thhalv10001503m.g PF02701 - Dof domain, zinc finger (zf-Dof) scaffold_22 + View
Eutrema salsugineum Thhalv10006092m.g PF02701 - Dof domain, zinc finger (zf-Dof) scaffold_19 - View
Eutrema salsugineum Thhalv10029492m.g PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED scaffold_3 + View
Fragaria x ananassa FAN03G0550 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb7-3 - View
Fragaria x ananassa FAN06G4576 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb7-2 + View
Fragaria x ananassa FAN04G0978 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb5-4 - View
Fragaria x ananassa FAN10G4276 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb7-1 + View
Fragaria x ananassa FAN10G3374 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb7-1 + View
Fragaria x ananassa FAN06G4093 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb7-2 + View
Fragaria x ananassa FAN01G0100 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb7-4 - View
Fragaria vesca FvH4_7g17000 PF02701 - Dof domain, zinc finger (zf-Dof) Fvb7 + View
Gossypium hirsutum Gohir.D12G117000 PF02701 - Dof domain, zinc finger (zf-Dof) D12 + View
Gossypium hirsutum Gohir.A12G113500 PF02701 - Dof domain, zinc finger (zf-Dof) A12 + View
Gossypium hirsutum Gohir.A07G136300 PF02701 - Dof domain, zinc finger (zf-Dof) A07 - View
Gossypium hirsutum Gohir.D12G239700 PF02701 - Dof domain, zinc finger (zf-Dof) D12 + View
Gossypium hirsutum Gohir.A12G238600 PF02701 - Dof domain, zinc finger (zf-Dof) A12 + View
Gossypium hirsutum Gohir.D07G141500 PF02701 - Dof domain, zinc finger (zf-Dof) D07 - View
Glycine max Glyma.07G053900 PF02701 - Dof domain, zinc finger (zf-Dof) Gm07 - View
Glycine max Glyma.19G257500 PF02701 - Dof domain, zinc finger (zf-Dof) Gm19 + View
Glycine max Glyma.03G258800 PF02701 - Dof domain, zinc finger (zf-Dof) Gm03 + View
Glycine max Glyma.16G022900 PF02701 - Dof domain, zinc finger (zf-Dof) Gm16 - View
Gossypium raimondii Gorai.001G153300 Chr01 - View
Gossypium raimondii Gorai.008G256800 Chr08 + View
Gossypium raimondii Gorai.008G126800 Chr08 + View
Helianthus annuus HanXRQChr17g0534381 Probable dof-type zinc finger DNA-binding family protein HanXRQChr17 - View
Lupinus albus Lalb_Chr17g0342791 PF02701 - Dof domain, zinc finger (zf-Dof) Lalb_Chr17 + View
Lupinus albus Lalb_Chr11g0067031 PF02701 - Dof domain, zinc finger (zf-Dof) Lalb_Chr11 + View
Lupinus albus Lalb_Chr23g0271681 PF02701 - Dof domain, zinc finger (zf-Dof) Lalb_Chr23 + View
Lupinus albus Lalb_Chr04g0254351 PF02701 - Dof domain, zinc finger (zf-Dof) Lalb_Chr04 - View
Lotus japonicus Lj1g0003978 PF02701 - Dof domain, zinc finger (zf-Dof) chr1 - View
Lotus japonicus Lj3g0007699 PF02701 - Dof domain, zinc finger (zf-Dof) chr3 - View
Lonicera japonica Lj8P202T39 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_3_140380 PF02701 - Dof domain, zinc finger (zf-Dof) Lsat_1_v8_lg_3 + View
Malus domestica MD07G1153300 Dof-type zinc finger DNA-binding family protein Chr07 + View
Malus domestica MD01G1084700 Dof-type zinc finger DNA-binding family protein Chr01 + View
Malus domestica MD07G1295200 Dof-type zinc finger DNA-binding family protein Chr07 + View
Manihot esculenta Manes.02G005000 Chromosome02 - View
Manihot esculenta Manes.01G244000 Chromosome01 - View
Manihot esculenta Manes.05G020600 Chromosome05 - View
Medicago truncatula Medtr8g027295 Dof-type zinc finger DNA-binding family protein chr8 - View
Nelumbo nucifera Nn3g18919 chr3 - View
Nicotiana tabacum Nitab4.5_0000307g0010 Zinc finger, Dof-type Nitab4.5_0000307 + View
Olea europaea Oeu038532.1 chr11 + View
Olea europaea Oeu004964.1 chr15 + View
Oryza sativa ssp. japonica Os02g0252400 Dof zinc finger transcriptional activator, Dof zinc finger transcription factor, Grain filling, GA response in aleurone cell chr02 - View
Petunia axillaris Peaxi162Scf00345g00128 Dof-type zinc finger DNA-binding family protein Peaxi162Scf00345 - View
Petunia axillaris Peaxi162Scf00074g00347 Dof-type zinc finger DNA-binding family protein Peaxi162Scf00074 - View
Punica granatum PGR042G3690 NC_045130.1 - View
Punica granatum PGR031G3891 NC_045127.1 + View
Prunus persica Prupe.2G192300 PF02701 - Dof domain, zinc finger (zf-Dof) Pp02 + View
Populus trichocarpa Potri.003G144500 PF02701 - Dof domain, zinc finger (zf-Dof) Chr03 + View
Populus trichocarpa Potri.001G086400 PF02701 - Dof domain, zinc finger (zf-Dof) Chr01 - View
Populus trichocarpa Potri.014G100900 PF02701 - Dof domain, zinc finger (zf-Dof) Chr14 + View
Populus trichocarpa Potri.002G174300 PF02701 - Dof domain, zinc finger (zf-Dof) Chr02 + View
Phaseolus vulgaris Phvul.006G114900 PF02701 - Dof domain, zinc finger (zf-Dof) Chr06 + View
Phaseolus vulgaris Phvul.010G115600 PF02701 - Dof domain, zinc finger (zf-Dof) Chr10 + View
Phaseolus vulgaris Phvul.009G047500 PF02701 - Dof domain, zinc finger (zf-Dof) Chr09 - View
Quercus lobata QL09p007759 9 - View
Quercus lobata QL08p045966 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0360381 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim02G0249900 chr02 + View
Rhododendron simsii Rhsim01G0174800 chr01 + View
Striga asiatica SGA_v2.0_scaffold104G30279 scaffold104 - View
Salix brachista Sabra03G0105100 GWHAAZH00000003 + View
Salix brachista Sabra02G0139100 GWHAAZH00000002 - View
Simmondsia chinensis Sc01g0010510 GWHAASQ00000001 + View
Sechium edule Sed0005748 LG01 - View
Sechium edule Sed0005505 LG02 + View
Sechium edule Sed0008625 LG12 - View
Solanum lycopersicum Solyc10g009360.4 Dof zinc finger protein (AHRD V3.3 *** A0A2K3M0E2_TRIPR) SL4.0ch10 - View
Solanum lycopersicum Solyc08g082910.2 Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC) SL4.0ch08 + View
Solanum lycopersicum Solyc01g096120.3 Dof zinc finger protein1 SL4.0ch01 + View
Schrenkiella parvula Sp5g01520 PF02701 - Dof domain, zinc finger (zf-Dof) ch5-1 - View
Schrenkiella parvula Sp6g01190 PTHR31992//PTHR31992:SF8 - FAMILY NOT NAMED // DOF ZINC FINGER PROTEIN DOF1.1-RELATED ch6-1 + View
Schrenkiella parvula Sp4g28640 PF02701 - Dof domain, zinc finger (zf-Dof) ch4-6 + View
Solanum pennellii Sopen01g039850 Zinc finger transcription factor of the Dof family involved in the control of seed germination. | dof affecting germination 1 (DAG1) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein Spenn-ch01 + View
Solanum pennellii Sopen10g005150 Dof-type zinc finger DNA-binding family protein | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein Spenn-ch10 - View
Solanum pennellii Sopen03g022580 Dof-type zinc finger DNA-binding family protein | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein Spenn-ch03 - View
Solanum pennellii Sopen08g031140 Dof-type zinc finger DNA-binding family protein | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400018541 Dof zinc finger protein ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400000120 Dof18 ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400012249 Zn finger protein ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400018886 Zinc finger protein ST4.03ch10 - View
Selenicereus undatus Hund16724 Scaffold_33675 - View
Selenicereus undatus Hund27180 Scaffold_2055 - View
Trochodendron aralioides TAR629G3403 group0 + View
Trochodendron aralioides TAR375G0474 group15 + View
Trochodendron aralioides TAR374G1174 group12 + View
Theobroma cacao Thecc.03G224400 F-box family protein Chromosome_3 - View
Theobroma cacao Thecc.01G339100 F-box family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104827633 dof zinc finger protein DOF2.5-like isoform X1 NW_010967884.1 + View
Tarenaya hassleriana THA.LOC104817382 dof zinc finger protein DOF2.5 NW_010965946.1 + View
Tarenaya hassleriana THA.LOC104802084 dof zinc finger protein DOF2.5-like isoform X1 NW_010970490.1 + View
Tarenaya hassleriana THA.LOC104809313 dof zinc finger protein DOF1.8-like NW_010965019.1 - View
Trifolium pratense TPR.G15915 Tp57577_TGAC_v2_LG5 + View
Trifolium pratense TPR.G4741 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI39G1187 NC_052250.1 - View
Vaccinium macrocarpon vmacro10136 Similar to DOF4.6: Dof zinc finger protein DOF4.6 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G1490 CM024078.1 - View
Vigna mungo VMungo0540G2411 CM024075.1 - View
Vitis vinifera GSVIVG01027184001 chr15 - View
Vitis vinifera GSVIVG01019619001 chr2 + View