Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G8240 LG-7 + View
Arabidopsis lyrata AL1G38670 scaffold_1 + View
Arabidopsis lyrata AL2G17190 scaffold_2 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I5UN8Z PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G10330 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1)%3B Has 31141 Blast hits to 12595 proteins in 196 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 63%3B Fungi - 42%3B Plants - 30558%3B Viruses - 0%3B Other Eukaryotes - 478 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G59720 Tetratricopeptide repeat (TPR)-like superfamily protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. CHLORORESPIRATORY REDUCTION28 (CRR28)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1)%3B Has 31527 Blast hits to 13136 proteins in 216 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 40%3B Fungi - 37%3B Plants - 31097%3B Viruses - 0%3B Other Eukaryotes - 353 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC05g25351 ChrC05 + View
Brassica carinata BcaB03g14092 ChrB03 - View
Brassica napus A06p10500 A06 + View
Brassica napus C01p36390 C01 - View
Brassica napus A01p28740 A01 - View
Brassica napus A07p13140 A07 - View
Brassica oleracea BolC5t29982H C5 + View
Brassica oleracea BolC4t24182H C4 + View
Brassica rapa BraA07t29085Z A07 - View
Capsicum annuum CAN.G27.1 PGAv.1.6.scaffold27 + View
Cardamine hirsuta CARHR053480 Pentatricopeptide repeat-containing protein Chr2 + View
Carya illinoinensis CiPaw.11G043500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr11 - View
Citrullus lanatus ClCG05G024610 Pentatricopeptide repeat-containing family protein CG_Chr05 - View
Cucumis melo MELO3C012057.2 Pentatricopeptide repeat-containing protein chr10 - View
Cucumis melo MELO3C001979.2 pentatricopeptide repeat-containing protein At1g74630 chr12 - View
Chenopodium quinoa AUR62026267 PCMP-H47: Pentatricopeptide repeat-containing protein At5g65570 C_Quinoa_Scaffold_3298 - View
Capsella rubella Carub.0002s0567 PF13041//PF13812//PF14432 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_2 + View
Capsella rubella Carub.0001s2415 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 scaffold_1 + View
Cucumis sativus L. CsaV3_1G005460 Pentatricopeptide repeat chr1 + View
Cucumis sativus L. CsaV3_6G036270 Pentatricopeptide repeat-containing protein chr6 - View
Daucus carota DCAR_031066 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv34197 GWHABJS00000008 + View
Durio zibethinus Duzib264G0315 NW_019167960.1 - View
Durio zibethinus Duzib248G0392 NW_019168048.1 - View
Durio zibethinus Duzib147G0768 NW_019168470.1 + View
Durio zibethinus Duzib248G0492 NW_019168048.1 - View
Eucalyptus grandis Eucgr.K02455 Chr11 + View
Eutrema salsugineum Thhalv10023355m.g PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_8 + View
Fragaria x ananassa FAN09G0371 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb6-2 - View
Fragaria x ananassa FAN02G1289 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-4 - View
Fragaria x ananassa FAN12G0259 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-3 + View
Fragaria x ananassa FAN08G2911 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5-3 + View
Fragaria x ananassa FAN14G4899 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-1 + View
Glycine max Glyma.19G090900 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm19 + View
Glycine max Glyma.17G099500 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm17 + View
Helianthus annuus HanXRQChr05g0155511 Putative tetratricopeptide-like helical domain HanXRQChr05 + View
Helianthus annuus HanXRQChr08g0236991 Putative tetratricopeptide-like helical domain; DYW domain HanXRQChr08 + View
Hydrangea macrophylla Hma1.2p1_1045F.1_g251480 Hma1.2p1_1045F.1 + View
Hydrangea macrophylla Hma1.2p1_0265F.1_g106680 Hma1.2p1_0265F.1 + View
Lupinus albus Lalb_Chr21g0318791 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 Lalb_Chr21 - View
Lactuca sativa Lsat_1_v5_gn_4_8840 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lsat_1_v8_lg_4 + View
Magnolia biondii MBI04_g34120_MAGBIO AED:0.13 Chr04 - View
Manihot esculenta Manes.04G092200 Chromosome04 - View
Manihot esculenta Manes.01G186900 Chromosome01 + View
Manihot esculenta Manes.05G096150 Chromosome05 + View
Medicago truncatula Medtr8g005670 mannan endo-1,4-beta-mannosidase-like protein chr8 + View
Medicago truncatula Medtr4g108030 PPR containing plant-like protein chr4 + View
Punica granatum PGR102G1769 NC_045129.1 - View
Punica granatum PGR119G1702 NC_045132.1 - View
Punica granatum PGR044G0849 NC_045134.1 - View
Papaver somniferum PSO591G0096 NW_020621603.1 + View
Phaseolus vulgaris Phvul.002G081200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 + View
Phaseolus vulgaris Phvul.009G185632 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 + View
Quercus lobata QL10p016725 10 - View
Rosa chinensis RcHm_v2.0_Chr4g0440691 RcHm_v2.0_Chr4 - View
Rosa chinensis RcHm_v2.0_Chr2g0169281 RcHm_v2.0_Chr2 + View
Striga asiatica SGA_v2.0_scaffold114G31904 scaffold114 + View
Striga asiatica SGA_v2.0_scaffold389G50573 scaffold389 - View
Striga asiatica SGA_v2.0_scaffold205G41769 scaffold205 + View
Salvia bowleyana SalBow8G2063 GWHASIU00000004 - View
Simmondsia chinensis Sc11g0001730 GWHAASQ00000011 - View
Simmondsia chinensis Sc12g0006230 GWHAASQ00000012 + View
Sechium edule Sed0020784 LG08 - View
Solanum lycopersicum Solyc01g010510.4 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2X910_CAPBA) SL4.0ch01 - View
Schrenkiella parvula Sp2g04830 PF13041//PF13812//PF14432 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) ch2-2 + View
Solanum tuberosum PGSC0003DMG402001308 Pentatricopeptide repeat-containing protein ST4.03ch02 - View
Trochodendron aralioides TAR622G0060 group8 - View
Trochodendron aralioides TAR371G1009 group13 - View
Tarenaya hassleriana THA.LOC104822113 pentatricopeptide repeat-containing protein At1g26900%2C mitochondrial isoform X2 NW_010966617.1 + View
Tripterygium wilfordii TWI34G1293 NC_052235.1 + View
Tripterygium wilfordii TWI34G0847 NC_052235.1 + View
Tripterygium wilfordii TWI81G0143 NC_052251.1 + View
Utricularia gibba unitig_749.g13238 unitig_749 + View
Vaccinium macrocarpon vmacro16333 Similar to PCMP-E22: Pentatricopeptide repeat-containing protein At2g02750 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20381 Similar to MAN6: Mannan endo-1,4-beta-mannosidase 6 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View