Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0012676 PREDICTED: auxin response factor 1 isoform X2 [Vitis vinifera] Chr6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.243 chr6 + View
Actinidia chinensis Actinidia00152 Lachesis_group12 - View
Avicennia marina MSTRG.16469 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.27878 ScioBoG_94932_HRSCAF_95134 - View
Capsicum annuum CAN.G855.50 PGAv.1.6.scaffold855 - View
Corylus avellana Haze_09986 Similar to ARF1: Auxin response factor 1 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc02_g23570 Auxin response factor 1 chr2 - View
Citrus clementina Ciclev10000491m.g scaffold_5 + View
Carpinus fangiana Cfa004446 Cfa02 + View
Carya illinoinensis CiPaw.05G001700 PTHR31384//PTHR31384:SF28 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 1 Chr05 + View
Carica papaya Cpa.g.sc173.22 supercontig_173 + View
Davidia involucrata Dinv29630 GWHABJS00000005 - View
Davidia involucrata Dinv29677 GWHABJS00000002 + View
Eucalyptus grandis Eucgr.G00076 Chr07 + View
Erythranthe guttata Migut.B00723 scaffold_2 + View
Fragaria x ananassa FAN04G2815 PTHR31384:SF28 - AUXIN RESPONSE FACTOR 1 Fvb5-4 + View
Glycine max Glyma.07G272800 PTHR31384//PTHR31384:SF28 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 1 Gm07 + View
Lonicera japonica Lj5C282T20 GWHAAZE00000005 - View
Magnolia biondii MBI03_g07141_MAGBIO AED:0.20 Chr03 + View
Malus domestica MD08G1247700 auxin response factor 1 Chr08 - View
Petunia axillaris Peaxi162Scf00011g01847 auxin response factor 1 Peaxi162Scf00011 - View
Prunus persica Prupe.1G585200 PTHR31384:SF28 - AUXIN RESPONSE FACTOR 1 Pp01 - View
Papaver somniferum PSO210G4727 NC_039359.1 + View
Populus trichocarpa Potri.003G001000 PTHR31384//PTHR31384:SF28 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 1 Chr03 + View
Populus trichocarpa Potri.004G228800 PTHR31384//PTHR31384:SF28 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 1 Chr04 - View
Quercus lobata QL02p103292 CM012294 - View
Salix brachista Sabra01G0173700 GWHAAZH00000001 - View
Solanum lycopersicum Solyc01g103050.3 Auxin Response Factor 1 SL4.0ch01 + View
Solanum pennellii Sopen01g045470 Encodes a member of the auxin response factor family. ARFs bind to the cis element 5-TGTCTC-3 ARFs mediate changes in gene expression in response to auxin. ARFs form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions. | auxin response factor 1 (ARF1) | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , Transcriptional factor B3 , AUX/IAA protein , Auxin response factor | BEST Arabidopsis thaliana protein match is: auxin response factor 11 . Spenn-ch01 + View
Trochodendron aralioides TAR628G0850 group5 + View
Theobroma cacao Thecc.06G017800 Auxin response factor 1 Chromosome_6 - View
Vitis vinifera GSVIVG01023149001 chr12 - View