Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0013209 unnamed protein product [Coffea canephora] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G14580 LG-1 + View
Aethionema arabicum Aa31LG6G12840 LG-6 + View
Acer truncatum Atru.chr3.882 chr3 - View
Acer truncatum Atru.chr13.243 chr13 + View
Actinidia chinensis Actinidia02366 Lachesis_group11 - View
Actinidia chinensis Actinidia15451 Lachesis_group26 + View
Actinidia chinensis Actinidia35668 Lachesis_group25 + View
Actinidia chinensis Actinidia22946 Lachesis_group26 + View
Actinidia chinensis Actinidia28723 Lachesis_group8 + View
Arabidopsis lyrata AL7G15160 scaffold_7 - View
Arabidopsis lyrata AL8G45490 scaffold_8 - View
Avicennia marina MSTRG.25270 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.15584 ScioBoG_19538_HRSCAF_19626 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GW5Q3X PTHR22792//PTHR22792:SF59 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1B-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G00RBV PTHR22792//PTHR22792:SF59 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1B-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8AT62F PTHR22792//PTHR22792:SF59 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1B-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YJWL0V K18757 - la-related protein 1 (LARP1) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT5G66100 winged-helix DNA-binding transcription factor family protein Encodes a LAM domain containing protein that is involved in leaf senescence. winged-helix DNA-binding transcription factor family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C RNA-binding protein Lupus La (InterPro:IPR006630)%3B BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT4G35890 winged-helix DNA-binding transcription factor family protein Encodes a cytoplasmic LAM domain containing protein that is involved in leaf senescence. winged-helix DNA-binding transcription factor family protein%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C RNA-binding protein Lupus La (InterPro:IPR006630)%3B BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G66100.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC04g22945 ChrC04 - View
Brassica carinata BcaB04g20125 ChrB04 - View
Brassica carinata BcaC04g23112 ChrC04 + View
Brassica carinata BcaC01g00526 ChrC01 + View
Brassica carinata BcaB07g31706 ChrB07 - View
Brassica carinata BcaNung04884 Contig1775 + View
Brassica napus A08p21620 A08 - View
Brassica napus C03p80960 C03 + View
Brassica napus C07p61390 C07 + View
Brassica napus C09p12040 C09 - View
Brassica napus A09p11540 A09 + View
Brassica napus A03p63920 A03 + View
Brassica napus A01p02820 A01 - View
Brassica napus C09p13590 C09 + View
Brassica napus C01p03150 C01 - View
Brassica oleracea BolC3t20355H C3 + View
Brassica oleracea BolC1t00300H C1 - View
Brassica oleracea BolC7t46565H C7 + View
Brassica oleracea BolC9t54250H C9 + View
Brassica oleracea BolC9t54094H C9 - View
Brassica rapa BraA09t36660Z A09 - View
Brassica rapa BraA01t00265Z A01 - View
Brassica rapa BraA08t34109Z A08 - View
Brassica rapa BraA03t15461Z A03 + View
Beta vulgaris EL10Ac1g02138 K18757 - la-related protein 1 (LARP1) Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G311.57 PGAv.1.6.scaffold311 - View
Cannabis sativa CANSAT01G3132 NC_044373.1 + View
Cicer arietinum L. Ca_03634_v3 Ca_LG1_v3 - View
Cicer arietinum L. Ca_24935_v3 Ca_LG8_v3 - View
Corylus avellana Haze_22677 Similar to LARP1C: La-related protein 1C (Arabidopsis thaliana OX%3D3702) 3 - View
Corylus avellana Haze_03714 Similar to LARP1C: La-related protein 1C (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc10_g01320 Putative winged-helix DNA-binding transcription factor family protein chr10 + View
Coffea canephora Cc07_g11180 Putative winged-helix DNA-binding transcription factor family protein chr7 - View
Citrus clementina Ciclev10000767m.g scaffold_5 - View
Citrus clementina Ciclev10025634m.g scaffold_7 + View
Carpinus fangiana Cfa007017 Cfa02 - View
Carpinus fangiana Cfa013990 Cfa05 - View
Cardamine hirsuta CARHR244280 La domain-containing protein Chr7 + View
Cardamine hirsuta CARHR281650 La domain-containing protein Chr8 - View
Cardamine hirsuta CARHR108140 winged-helix DNA-binding transcription factor family protein Chr3 + View
Carya illinoinensis CiPaw.07G061900 PTHR22792//PTHR22792:SF59 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1B-RELATED Chr07 - View
Carya illinoinensis CiPaw.07G145200 PTHR22792:SF66 - LA-RELATED PROTEIN 7 Chr07 + View
Carya illinoinensis CiPaw.08G127500 PTHR22792//PTHR22792:SF59 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1B-RELATED Chr08 + View
Carya illinoinensis CiPaw.08G068500 PTHR22792:SF66 - LA-RELATED PROTEIN 7 Chr08 - View
Citrullus lanatus ClCG01G020520 La domain-containing family protein CG_Chr01 - View
Cucumis melo MELO3C007932.2 La related protein-like chr08 - View
Corchorus olitorius COL.COLO4_26105 hypothetical protein AWUE01019205.1 + View
Carica papaya Cpa.g.sc6.300 supercontig_6 - View
Carica papaya Cpa.g.sc26.285 supercontig_26 + View
Capsella rubella Carub.0007s0434 K18757 - la-related protein 1 (LARP1) scaffold_7 - View
Capsella rubella Carub.0003s3190 K18757 - la-related protein 1 (LARP1) scaffold_3 + View
Cucumis sativus L. CsaV3_6G047400 la-related protein 1C chr6 - View
Davidia involucrata Dinv08560 GWHABJS00000012 - View
Davidia involucrata Dinv39547 GWHABJS00000011 - View
Davidia involucrata Dinv31880 GWHABJS00000002 - View
Durio zibethinus Duzib264G0858 NW_019167960.1 - View
Durio zibethinus Duzib147G0727 NW_019168470.1 - View
Durio zibethinus Duzib093G0045 NW_019167937.1 - View
Durio zibethinus Duzib187G1973 NW_019167860.1 - View
Durio zibethinus Duzib116G0334 NW_019167949.1 + View
Erigeron canadensis ECA232G1530 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA238G1726 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.F01675 Chr06 - View
Eucalyptus grandis Eucgr.J02483 Chr10 - View
Eucalyptus grandis Eucgr.I02318 Chr09 + View
Erythranthe guttata Migut.L00906 scaffold_12 - View
Erythranthe guttata Migut.N03180 scaffold_14 - View
Eutrema salsugineum Thhalv10024905m.g PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED scaffold_1 - View
Fragaria x ananassa FAN15G2372 PTHR22792//PTHR22792:SF66 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 7 Fvb2-4 - View
Fragaria x ananassa FAN28G0595 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Fvb1-1 + View
Fragaria x ananassa FAN19G0158 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Fvb1-4 + View
Fragaria x ananassa FAN23G2699 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Fvb1-3 + View
Fragaria x ananassa FAN20G0221 PTHR22792//PTHR22792:SF66 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 7 Fvb2-3 - View
Fragaria x ananassa FAN26G0382 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Fvb1-2 + View
Fragaria vesca FvH4_2g38070 PTHR22792:SF66 - LA-RELATED PROTEIN 7 Fvb2 + View
Fragaria vesca FvH4_1g11260 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Fvb1 + View
Gossypium hirsutum Gohir.D03G006500 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED D03 + View
Gossypium hirsutum Gohir.A11G172800 K18757 - la-related protein 1 (LARP1) A11 + View
Gossypium hirsutum Gohir.A02G173300 K18757 - la-related protein 1 (LARP1) A02 - View
Gossypium hirsutum Gohir.D11G044500 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED D11 + View
Gossypium hirsutum Gohir.D11G179600 K18757 - la-related protein 1 (LARP1) D11 + View
Gossypium hirsutum Gohir.A11G041200 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED A11 + View
Gossypium hirsutum Gohir.A01G109600 PTHR22792:SF66 - LA-RELATED PROTEIN 7 A01 + View
Gossypium hirsutum Gohir.D01G096400 PTHR22792:SF66 - LA-RELATED PROTEIN 7 D01 + View
Glycine max Glyma.16G123100 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Gm16 + View
Glycine max Glyma.02G045400 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Gm02 + View
Glycine max Glyma.04G021900 PTHR22792//PTHR22792:SF2 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1 Gm04 + View
Glycine max Glyma.11G080100 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Gm11 - View
Glycine max Glyma.06G022100 PTHR22792//PTHR22792:SF2 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1 Gm06 + View
Glycine max Glyma.01G163300 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Gm01 + View
Gossypium raimondii Gorai.007G191700 Chr07 + View
Gossypium raimondii Gorai.003G006800 Chr03 + View
Gossypium raimondii Gorai.002G121900 Chr02 + View
Helianthus annuus HanXRQChr13g0414561 Probable winged-helix DNA-binding transcription factor family protein HanXRQChr13 + View
Helianthus annuus HanXRQChr14g0441741 Putative winged helix-turn-helix DNA-binding domain HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0315F.1_g122430 Hma1.2p1_0315F.1 - View
Lupinus albus Lalb_Chr16g0377401 K18757 - la-related protein 1 (LARP1) Lalb_Chr16 + View
Lupinus albus Lalb_Chr09g0321501 PTHR22792//PTHR22792:SF59 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1B-RELATED Lalb_Chr09 + View
Lupinus albus Lalb_Chr16g0391461 K18757 - la-related protein 1 (LARP1) Lalb_Chr16 - View
Lotus japonicus Lj4g0022960 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED chr4 + View
Lotus japonicus Lj1g0020044 PTHR22792:SF2 - LA-RELATED PROTEIN 1 chr1 + View
Lotus japonicus Lj2g0023288 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED chr2 - View
Lonicera japonica Lj2A482G64 GWHAAZE00000002 - View
Lonicera japonica Lj4A19T11 GWHAAZE00000004 + View
Lonicera japonica Lj4C223T13 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_2_75581 K18757 - la-related protein 1 (LARP1) Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_3_71281 KOG2590 - RNA-binding protein LARP/SRO9 and related La domain proteins Lsat_1_v8_lg_3 + View
Malus domestica MD15G1008200 winged-helix DNA-binding transcription factor family protein Chr15 + View
Malus domestica MD15G1240700 winged-helix DNA-binding transcription factor family protein Chr15 + View
Malus domestica MD02G1125000 winged-helix DNA-binding transcription factor family protein Chr02 + View
Manihot esculenta Manes.01G150000 Chromosome01 - View
Manihot esculenta Manes.05G144300 Chromosome05 + View
Manihot esculenta Manes.02G109100 Chromosome02 - View
Manihot esculenta Manes.18G011260 Chromosome18 + View
Medicago truncatula Medtr8g075120 LA-related protein 6 LA RNA-binding domain protein chr8 + View
Medicago truncatula Medtr3g114340 LA-related protein 6 LA RNA-binding domain protein chr3 - View
Medicago truncatula Medtr5g022790 ATP synthase, A subunit chr5 - View
Nelumbo nucifera Nn5g30805 chr5 - View
Nicotiana tabacum Nitab4.5_0002337g0100 RNA-binding protein Lupus La, Winged helix-turn-helix DNA-binding domain Nitab4.5_0002337 + View
Olea europaea Oeu051160.1 chr18 + View
Petunia axillaris Peaxi162Scf00328g00319 winged-helix DNA-binding transcription factor family protein Peaxi162Scf00328 + View
Petunia axillaris Peaxi162Scf00439g00410 winged-helix DNA-binding transcription factor family protein Peaxi162Scf00439 - View
Punica granatum PGR119G1496 NC_045132.1 + View
Punica granatum PGR102G2311 NC_045129.1 + View
Prunus persica Prupe.7G173400 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Pp07 - View
Prunus persica Prupe.1G361000 PTHR22792:SF66 - LA-RELATED PROTEIN 7 Pp01 + View
Pisum sativum Psat4g102240 La domain chr4LG4 - View
Pisum sativum Psat2g152440 La domain chr2LG1 + View
Papaver somniferum PSO675G1812 NC_039358.1 - View
Papaver somniferum PSO700G0118 NW_020620825.1 - View
Papaver somniferum PSO170G2829 NC_039360.1 - View
Populus trichocarpa Potri.005G109400 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Chr05 + View
Populus trichocarpa Potri.005G243600 PTHR22792:SF66 - LA-RELATED PROTEIN 7 Chr05 - View
Phaseolus vulgaris Phvul.009G018800 PTHR22792:SF2 - LA-RELATED PROTEIN 1 Chr09 - View
Phaseolus vulgaris Phvul.003G266200 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Chr03 - View
Phaseolus vulgaris Phvul.002G105500 PTHR22792:SF59 - LA-RELATED PROTEIN 1B-RELATED Chr02 + View
Quercus lobata QL02p012478 CM012294 - View
Quercus lobata QL06p051361 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0303491 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr2g0098711 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0206800 chr10 + View
Rhododendron simsii Rhsim08G0031300 chr08 + View
Salvia bowleyana SalBow7G3509 GWHASIU00000005 + View
Salix brachista Sabra05G0089600 GWHAAZH00000005 + View
Salix brachista Sabra05G0188600 GWHAAZH00000005 - View
Simmondsia chinensis Sc16g0001880 GWHAASQ00000016 + View
Simmondsia chinensis Sc07g0001160 GWHAASQ00000007 - View
Simmondsia chinensis Sc02g0008750 GWHAASQ00000002 - View
Simmondsia chinensis Sc15g0004760 GWHAASQ00000015 + View
Sechium edule Sed0015489 LG14 - View
Sechium edule Sed0025993 LG10 - View
Solanum lycopersicum Solyc02g061960.3 la-related protein 1C-like (AHRD V3.3 *** A0A2I4FDA4_9ROSI) SL4.0ch02 + View
Solanum lycopersicum Solyc04g081820.3 la-related protein 1C-like (AHRD V3.3 *** A0A2I4H6L2_9ROSI) SL4.0ch04 - View
Schrenkiella parvula Sp7g33670 K18757 - la-related protein 1 (LARP1) ch7-6 + View
Schrenkiella parvula Sp2g30590 K18757 - la-related protein 1 (LARP1) ch2-4 - View
Solanum pennellii Sopen04g035450 winged-helix DNA-binding transcription factor family protein | LOCATED IN: chloroplast | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , RNA-binding protein Lupus La | BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein Spenn-ch04 - View
Solanum pennellii Sopen02g012920 winged-helix DNA-binding transcription factor family protein | LOCATED IN: chloroplast | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , RNA-binding protein Lupus La | BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400009948 Lupus la ribonucleoprotein ST4.03ch04 - View
Selenicereus undatus Hund16513 Scaffold_33677 - View
Selenicereus undatus Hund14068 Scaffold_33679 - View
Trochodendron aralioides TAR376G0483 group14 - View
Trochodendron aralioides TAR381G0626 group11 + View
Trochodendron aralioides TAR625G1154 group4 + View
Trochodendron aralioides TAR628G0873 group5 - View
Theobroma cacao Thecc.01G013200 Winged-helix DNA-binding transcription factor family protein Chromosome_1 + View
Theobroma cacao Thecc.08G049100 Winged-helix DNA-binding transcription factor family protein Chromosome_8 - View
Tarenaya hassleriana THA.LOC104807509 la-related protein 1C-like isoform X1 NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104819169 la-related protein 1B-like NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104819738 la-related protein 1C isoform X3 NW_010966177.1 + View
Trifolium pratense TPR.G38088 Tp57577_TGAC_v2_LG7 - View
Trifolium pratense TPR.G19509 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI56G0858 NC_052242.1 - View
Tripterygium wilfordii TWI36G1177 NC_052237.1 - View
Tripterygium wilfordii TWI53G0756 NC_052244.1 + View
Tripterygium wilfordii TWI73G0370 NC_052232.1 - View
Vaccinium macrocarpon vmacro22201 Similar to LARP1C: La-related protein 1C (Arabidopsis thaliana OX%3D3702) scaffold00312_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro21866 Similar to LARP1B: La-related protein 1B (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro18431 Similar to LARP1C: La-related protein 1C (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G2341 CM024072.1 - View
Vigna mungo VMungo0251G2345 CM024069.1 - View
Vigna mungo VMungo1215G1291 CM024074.1 - View
Vanilla planifolia HPP92_025900 La related protein-like *-* CM028163.1 + View
Vitis vinifera GSVIVG01009971001 chr18 - View
Zea mays Zm00001eb331850 Zm00001e035972 La-related protein 1C 7 + View