Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023031 Translationally-controlled tumor [Gossypium arboreum] Chr6 - View
CSS0029129 hypothetical protein PRUPE_ppa009639mg [Prunus persica] Contig1125 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G15840 LG-5 + View
Aethionema arabicum Aa31LG8G3760 LG-8 - View
Acer truncatum Atru.chr4.2858 chr4 - View
Actinidia chinensis Actinidia14295 Lachesis_group18 - View
Actinidia chinensis Actinidia00014 Lachesis_group10 + View
Arabidopsis lyrata AL3G16150 scaffold_3 - View
Arabidopsis lyrata AL3G29560 scaffold_3 - View
Avicennia marina MSTRG.24795 ScioBoG_4088_HRSCAF_4107 - View
Avicennia marina MSTRG.21793 ScioBoG_3008_HRSCAF_3015 + View
Avicennia marina MSTRG.10100 ScioBoG_12795_HRSCAF_12848 - View
Aquilegia oxysepala Aqoxy2G02962 CHR02 + View
Arabidopsis thaliana AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein Methionine sulfoxide reductase (MSS4-like) family protein%3B CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105)%2C Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323)%2C Translationally controlled tumour protein%2C conserved site (InterPro:IPR018103)%2C Mss4-like (InterPro:IPR011057)%3B BEST Arabidopsis thaliana protein match is: translationally controlled tumor protein (TAIR:AT3G16640.1)%3B Has 857 Blast hits to 857 proteins in 300 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 450%3B Fungi - 152%3B Plants - 156%3B Viruses - 0%3B Other Eukaryotes - 99 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT3G16640 translationally controlled tumor protein Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies%2C TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs%2C generated through RNAi%2C are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well. translationally controlled tumor protein (TCTP)%3B INVOLVED IN: in 8 processes%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 17 growth stages%3B CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105)%2C Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323)%2C Translationally controlled tumour protein%2C conserved site (InterPro:IPR018103)%2C Mss4-like (InterPro:IPR011057)%3B BEST Arabidopsis thaliana protein match is: Methionine sulfoxide reductase (MSS4-like) family protein (TAIR:AT3G05540.1)%3B Has 867 Blast hits to 867 proteins in 310 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 452%3B Fungi - 160%3B Plants - 158%3B Viruses - 0%3B Other Eukaryotes - 97 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0796G023 AmTr_v1.0_scaffold00045 - View
Brassica carinata BcaC09g48618 ChrC09 - View
Brassica carinata BcaB06g25765 ChrB06 - View
Brassica napus C01p47690 C01 + View
Brassica napus C05p49630 C05 + View
Brassica napus A01p37680 A01 + View
Brassica napus A05p32910 A05 + View
Brassica oleracea BolC1t04741H C1 + View
Brassica oleracea BolC5t33719H C5 + View
Brassica rapa BraA01t03828Z A01 + View
Brassica rapa BraA05t22116Z A05 + View
Cannabis sativa CANSAT78G2432 NC_044376.1 + View
Cicer arietinum L. Ca_01930_v3 Ca_LG1_v3 + View
Coffea canephora Cc03_g01790 Translationally-controlled tumor protein homolog chr3 + View
Coffea canephora Cc02_g34190 Translationally-controlled tumor protein homolog chr2 - View
Citrus clementina Ciclev10006071m.g scaffold_9 + View
Ceratophyllum demersum CDE02G4355 1 + View
Cardamine hirsuta CARHR091890 translationally controlled tumor protein Chr3 - View
Cardamine hirsuta CARHR079930 Translationally controlled tumor protein Chr3 - View
Carya illinoinensis CiPaw.07G022300 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Chr07 + View
Carya illinoinensis CiPaw.02G082400 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Chr02 + View
Carya illinoinensis CiPaw.08G161800 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Chr08 - View
Citrullus lanatus ClCG05G006160 Translationally controlled tumor protein CG_Chr05 - View
Cucumis melo MELO3C006670.2 Translationally-controlled tumor protein homolog chr06 - View
Corchorus olitorius COL.COLO4_13853 Mss4-like protein AWUE01015332.1 + View
Capsella rubella Carub.0003s0483 PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED scaffold_3 - View
Capsella rubella Carub.0003s1637 PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED scaffold_3 - View
Cucumis sativus L. CsaV3_3G014730 Translationally-controlled tumor protein homolog chr3 - View
Daucus carota DCAR_030523 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_002466 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_023287 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv44372 GWHABJS00000014 - View
Davidia involucrata Dinv29753 GWHABJS00000016 - View
Davidia involucrata Dinv40335 GWHABJS00000005 - View
Durio zibethinus Duzib177G0961 NW_019168004.1 - View
Durio zibethinus Duzib151G1119 NW_019167904.1 - View
Durio zibethinus Duzib128G0576 NW_019168481.1 + View
Durio zibethinus Duzib212G0587 NW_019168026.1 + View
Eucalyptus grandis Eucgr.H03928 Chr08 - View
Eucalyptus grandis Eucgr.H04536 Chr08 - View
Erythranthe guttata Migut.G00151 scaffold_7 + View
Eutrema salsugineum Thhalv10022380m.g PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED scaffold_13 + View
Eutrema salsugineum Thhalv10021661m.g PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED scaffold_13 + View
Fragaria x ananassa FAN07G0701 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Fvb4-4 + View
Fragaria x ananassa FAN12G2004 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Fvb4-3 - View
Fragaria x ananassa FAN12G1617 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Fvb4-3 + View
Fragaria x ananassa FAN17G0151 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Fvb4-2 - View
Fragaria vesca FvH4_4g18300 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Fvb4 - View
Gossypium hirsutum Gohir.D02G054800 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) D02 - View
Gossypium hirsutum Gohir.A02G049700 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) A02 - View
Gossypium hirsutum Gohir.A11G268200 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) A11 - View
Gossypium hirsutum Gohir.D11G278100 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) D11 - View
Glycine max Glyma.09G044200 PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Gm09 + View
Glycine max Glyma.15G148900 PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Gm15 - View
Glycine max Glyma.20G236602 Gm20 - View
Gossypium raimondii Gorai.005G060700 Chr05 - View
Gossypium raimondii Gorai.007G300300 Chr07 - View
Hydrangea macrophylla Hma1.2p1_1185F.1_g265040 Hma1.2p1_1185F.1 + View
Lupinus albus Lalb_Chr07g0177751 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Lalb_Chr07 + View
Lotus japonicus Lj4g0018264 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) chr4 + View
Lotus japonicus Lj5g0009266 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) chr5 + View
Lonicera japonica Lj6A677G78 GWHAAZE00000006 - View
Lonicera japonica Lj3A820G60 GWHAAZE00000003 - View
Magnolia biondii MBI19_g13197_MAGBIO AED:0.04 Chr19 + View
Malus domestica MD13G1167500 translationally controlled tumor protein Chr13 + View
Malus domestica MD16G1167600 translationally controlled tumor protein Chr16 - View
Manihot esculenta Manes.15G011700 Chromosome15 + View
Manihot esculenta Manes.08G117100 Chromosome08 + View
Medicago truncatula Medtr2g436620 translationally-controlled tumor-like protein chr2 + View
Medicago truncatula Medtr1g083340 translationally-controlled tumor-like protein chr1 - View
Nelumbo nucifera Nn3g21467 chr3 - View
Nelumbo nucifera Nn4g25812 chr4 + View
Petunia axillaris Peaxi162Scf00037g01227 Peaxi162Scf00037 + View
Petunia axillaris Peaxi162Scf00071g00528 translationally controlled tumor protein Peaxi162Scf00071 + View
Punica granatum PGR031G0827 NC_045127.1 + View
Punica granatum PGR004G2487 NC_045131.1 + View
Prunus persica Prupe.1G134900 PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Pp01 + View
Pisum sativum Psat6g150360 Translationally controlled tumour protein chr6LG2 + View
Pisum sativum Psat1g154600 Translationally controlled tumour protein chr1LG6 - View
Papaver somniferum PSO210G3241 NC_039359.1 - View
Papaver somniferum PSO832G3019 NC_039367.1 + View
Populus trichocarpa Potri.010G013400 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Chr10 + View
Populus trichocarpa Potri.008G221200 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Chr08 + View
Populus trichocarpa Potri.005G024800 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) Chr05 + View
Phaseolus vulgaris Phvul.007G197200 PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Chr07 - View
Phaseolus vulgaris Phvul.009G248700 PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Chr09 - View
Quercus lobata QL06p009087 6 - View
Rhododendron simsii Rhsim02G0008500 chr02 + View
Rhododendron simsii Rhsim09G0007100 chr09 - View
Rhododendron simsii Rhsim04G0223500 chr04 - View
Striga asiatica SGA_v2.0_scaffold67G22624 scaffold67 + View
Striga asiatica SGA_v2.0_scaffold18G08313 scaffold18 - View
Salvia bowleyana SalBow2G0057 GWHASIU00000007 + View
Salix brachista Sabra10G0008600 GWHAAZH00000010 + View
Salix brachista Sabra05G0030200 GWHAAZH00000005 + View
Simmondsia chinensis Sc13g0003420 GWHAASQ00000013 + View
Sechium edule Sed0013337 LG02 + View
Sechium edule Sed0023576 LG12 - View
Solanum lycopersicum Solyc01g099770.3 meloidogyne-induced giant cell protein DB141 SL4.0ch01 + View
Schrenkiella parvula Sp3g14930 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) ch3-1 - View
Schrenkiella parvula Sp3g04380 KOG1727 - Microtubule-binding protein (translationally controlled tumor protein) ch3-1 - View
Solanum tuberosum PGSC0003DMG400024716 Translationally-controlled tumor protein homolog ST4.03ch01 + View
Selenicereus undatus Hund07101 Scaffold_33676 - View
Trochodendron aralioides TAR636G3213 group1 + View
Trochodendron aralioides TAR362G0208 group17 + View
Theobroma cacao Thecc.05G313400 Translationally-controlled tumor protein Chromosome_5 - View
Theobroma cacao Thecc.04G285800 Translationally-controlled tumor protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104818722 translationally-controlled tumor protein homolog NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104820295 translationally-controlled tumor protein homolog NW_010966178.1 + View
Tripterygium wilfordii TWI73G0700 NC_052232.1 + View
Tripterygium wilfordii TWI09G0915 NC_052245.1 - View
Utricularia gibba unitig_748.g8728 unitig_748 + View
Vaccinium macrocarpon vmacro15228 Similar to TCTP: Translationally-controlled tumor protein homolog (Fragaria ananassa OX%3D3747) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0777 CM024072.1 + View
Vigna mungo VMungo1215G0604 CM024074.1 - View