Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.2423 chr9 + View
Actinidia chinensis Actinidia33970 Lachesis_group21 - View
Actinidia chinensis Actinidia34945 Lachesis_group2 - View
Actinidia chinensis Actinidia19089 Lachesis_group9 - View
Actinidia chinensis Actinidia33049 Lachesis_group13 + View
Actinidia chinensis Actinidia04974 Lachesis_group1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7T3N35 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IRQL5F PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT3G48050 protein SUO Encodes a large protein with N-terminal bromo-adjacent homology (BAH) and transcription elongation factor S-II (TFS2N) domains and two C-terminal GW (glycine and tryptophan) repeats. It is nuclear and colocalizes with the processing-body component DCP1 in the cytoplasm. SOU is a component of the miRNA pathway and is involved in translational repression. BAH domain %3BTFIIS helical bundle-like domain%3B FUNCTIONS IN: transcription regulator activity%2C DNA binding%3B INVOLVED IN: transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: male gametophyte%2C cultured cell%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor IIS%2C N-terminal (InterPro:IPR017923)%2C Transcription elongation factor%2C TFIIS/CRSP70%2C N-terminal%2C sub-type (InterPro:IPR003617)%2C Bromo adjacent homology (BAH) domain (InterPro:IPR001025)%2C Transcription elongation factor%2C TFIIS/elongin A/CRSP70%2C N-terminal (InterPro:IPR010990)%3B BEST Arabidopsis thaliana protein match is: BAH domain %3BTFIIS helical bundle-like domain (TAIR:AT3G48060.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr3 - View
Beta vulgaris EL10Ac5g10809 PF01426//PF08711 - BAH domain (BAH) // TFIIS helical bundle-like domain (Med26) Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G781.40 PGAv.1.6.scaffold781 - View
Cicer arietinum L. Ca_04215_v3 Ca_LG2_v3 - View
Corylus avellana Haze_07454 Protein of unknown function 4 + View
Citrus clementina Ciclev10018474m.g scaffold_3 + View
Carya illinoinensis CiPaw.12G024300 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Chr12 + View
Carya illinoinensis CiPaw.11G030200 PF01426//PF08711 - BAH domain (BAH) // TFIIS helical bundle-like domain (Med26) Chr11 - View
Citrullus lanatus ClCG10G014480 BAH domain-containing protein, putative CG_Chr10 - View
Citrullus lanatus ClCG06G016820 BAH and TFIIS domain-containing protein CG_Chr06 + View
Cucumis melo MELO3C017110.2 BAH domain-containing protein, putative chr02 + View
Cucumis melo MELO3C009929.2 BAH domain-containing protein chr04 - View
Chenopodium quinoa AUR62031026 Protein of unknown function C_Quinoa_Scaffold_2689 - View
Chenopodium quinoa AUR62008265 Protein of unknown function C_Quinoa_Scaffold_3422 - View
Capsella rubella Carub.0005s1416 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN scaffold_5 - View
Cucumis sativus L. CsaV3_1G001700 BAH domain-containing protein, putative chr1 - View
Cucumis sativus L. CsaV3_3G042090 BAH domain-containing protein chr3 + View
Davidia involucrata Dinv35034 GWHABJS00000012 + View
Davidia involucrata Dinv33520 GWHABJS00000014 - View
Davidia involucrata Dinv09166 GWHABJS00000019 - View
Davidia involucrata Dinv20686 GWHABJS00000006 + View
Durio zibethinus Duzib068G0410 NW_019167838.1 - View
Erigeron canadensis ECA238G4590 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA246G5268 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.K02871 Chr11 - View
Fragaria x ananassa FAN14G5012 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria x ananassa FAN04G0982 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Fvb5-4 + View
Fragaria x ananassa FAN18G0960 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Fvb5-1 + View
Fragaria x ananassa FAN13G1639 PTHR15141:SF52 - BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Fvb5-2 + View
Fragaria x ananassa FAN02G1697 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria x ananassa FAN05G0337 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN08G2183 PTHR15141:SF52 - BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Fvb5-3 - View
Fragaria x ananassa FAN09G2854 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria vesca FvH4_6g50290 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Fvb6 + View
Glycine max Glyma.13G070500 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.06G184600 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Gm06 - View
Glycine max Glyma.17G092200 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Gm17 - View
Glycine max Glyma.19G012300 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Gm19 - View
Glycine max Glyma.04G180100 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Gm04 + View
Glycine max Glyma.05G035100 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Gm05 + View
Helianthus annuus HanXRQChr15g0474451 Putative bromo adjacent homology (BAH) domain; Transcription factor IIS, N-terminal HanXRQChr15 + View
Hydrangea macrophylla Hma1.2p1_0967F.1_g242410 Hma1.2p1_0967F.1 - View
Lupinus albus Lalb_Chr02g0159741 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Lalb_Chr02 - View
Lupinus albus Lalb_Chr21g0319331 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Lalb_Chr21 + View
Lupinus albus Lalb_Chr06g0176391 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Lalb_Chr06 - View
Lotus japonicus Lj2g0007996 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED chr2 + View
Lotus japonicus Lj1g0027318 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN chr1 + View
Lonicera japonica Lj9A451G98 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_2_92701 PTHR15141:SF52 - BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Lsat_1_v8_lg_2 + View
Malus domestica MD17G1038800 BAH domain Chr17 - View
Malus domestica MD14G1184800 BAH domain Chr14 - View
Malus domestica MD09G1037500 BAH domain Chr09 - View
Malus domestica MD06G1178400 BAH domain Chr06 - View
Manihot esculenta Manes.14G068800 Chromosome14 - View
Medicago truncatula Medtr6g007787 BAH domain; TFIIS helical bundle-like domain protein, putative chr6 - View
Nelumbo nucifera Nn3g16961 chr3 - View
Nelumbo nucifera Nn4g22872 chr4 - View
Olea europaea Oeu041574.1 chr10 - View
Petunia axillaris Peaxi162Scf00689g00342 BAH domain Peaxi162Scf00689 - View
Punica granatum PGR083G1303 NC_045133.1 - View
Punica granatum PGR044G2157 NC_045134.1 + View
Prunus persica Prupe.3G280200 PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED Pp03 + View
Prunus persica Prupe.5G177500 PTHR15141:SF52 - BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Pp05 - View
Populus trichocarpa Potri.015G072800 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Chr15 + View
Populus trichocarpa Potri.012G077500 PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Chr12 + View
Phaseolus vulgaris Phvul.004G019400 Chr04 - View
Quercus lobata QL10p013472 10 + View
Rosa chinensis RcHm_v2.0_Chr2g0170611 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr7g0179511 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim10G0026100 chr10 - View
Rhododendron simsii Rhsim08G0169200 chr08 + View
Salix brachista Sabra15G0097000 GWHAAZH00000015 + View
Salix brachista Sabra12G0055500 GWHAAZH00000012 + View
Simmondsia chinensis Sc04g0001990 GWHAASQ00000004 - View
Sechium edule Sed0009500 LG12 - View
Sechium edule Sed0013402 LG08 - View
Sechium edule Sed0003770 LG06 - View
Sechium edule Sed0021697 LG08 + View
Solanum lycopersicum Solyc06g071350.4 Bromo adjacent homology (BAH) domain (AHRD V3.3 *-* A0A200QLJ5_9MAGN) SL4.0ch06 + View
Solanum lycopersicum Solyc03g114060.3 Bromo adjacent homology (BAH) domain (AHRD V3.3 *** A0A200R0M3_9MAGN) SL4.0ch03 + View
Solanum pennellii Sopen03g033110 BAH domain , TFIIS helical bundle-like domain | FUNCTIONS IN: transcription regulator activity, DNA binding | INVOLVED IN: transcription | LOCATED IN: nucleus | EXPRESSED IN: male gametophyte, cultured cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type , Transcription factor IIS, N-terminal , Bromo adjacent homology (BAH) domain , Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal | BEST Arabidopsis thaliana protein match is: BAH domain , TFIIS helical bundle-like domain Spenn-ch03 + View
Trochodendron aralioides TAR622G0397 group8 + View
Trochodendron aralioides TAR371G0279 group13 - View
Trochodendron aralioides TAR374G0296 group12 + View
Trochodendron aralioides TAR629G0989 group0 + View
Theobroma cacao Thecc.03G006900 BAH domain Chromosome_3 + View
Trifolium pratense TPR.G2286 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI81G0100 NC_052251.1 - View
Tripterygium wilfordii TWI15G0817 NC_052247.1 + View
Tripterygium wilfordii TWI60G0121 NC_052246.1 + View
Vaccinium macrocarpon vmacro19366 Protein of unknown function chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18233 Protein of unknown function chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05798 Protein of unknown function chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G1446 CM024077.1 - View
Vitis vinifera GSVIVG01032521001 chr14 - View
Vitis vinifera GSVIVG01007806001 chr17 + View