Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005031 PREDICTED: transcription factor EGL1 [Vitis vinifera] Chr14 + View
CSS0010962 PREDICTED: myc anthocyanin regulatory protein isoform X1 [Vitis vinifera] Chr6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G620 LG-9 - View
Aethionema arabicum Aa31LG2G860 LG-2 + View
Acer truncatum Atru.chr9.2183 chr9 - View
Actinidia chinensis Actinidia02003 Lachesis_group23 - View
Actinidia chinensis Actinidia20908 Lachesis_group6 - View
Actinidia chinensis Actinidia14565 Lachesis_group6 - View
Actinidia chinensis Actinidia10014 Lachesis_group0 + View
Actinidia chinensis Actinidia27380 Lachesis_group14 + View
Arabidopsis lyrata AL7G48130 scaffold_7 - View
Arabidopsis lyrata AL6G52990 scaffold_6 + View
Avicennia marina MSTRG.25615 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.11982 ScioBoG_17730_HRSCAF_17811 - View
Aquilegia oxysepala Aqoxy7G00315 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SWJY0L PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7E0N0H PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GWZ248 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KL9P34 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1BTX43 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT5G41315 basic helix-loop-helix (bHLH) DNA-binding superfamily protein encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development. GLABROUS 3 (GL3)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G63650 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Mutant has reduced trichomes%2C anthocyanin%2C and seed coat mucilage and abnormally patterned stomates. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1%2C the myb proteins GL1%2C PAP1 and 2%2C CPC and TRY%2C and it will form heterodimers with GL3. Expression in N (non-hair cell forming) cell layers is negatively regulated by WER. Expression in H cells (hair cell forming) is promoted by CPC/TRY. ENHANCER OF GLABRA 3 (EGL3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: epidermal cell fate specification%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G41315.1)%3B Has 3538 Blast hits to 3375 proteins in 203 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 64%3B Fungi - 64%3B Plants - 3403%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). ENHANCER OF GLABRA 3 (EGL3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: epidermal cell fate specification%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G41315.1). Chr1 + View
Brassica carinata BcaC02g08969 ChrC02 - View
Brassica carinata BcaC04g22496 ChrC04 + View
Brassica carinata BcaB06g27611 ChrB06 + View
Brassica carinata BcaB07g31558 ChrB07 - View
Brassica carinata BcaC04g22694 ChrC04 - View
Brassica napus A09p15400 A09 - View
Brassica napus A04p14450 A04 + View
Brassica napus C09p18670 C09 - View
Brassica napus A09p13790 A09 + View
Brassica napus C04p48350 C04 + View
Brassica napus C09p16460 C09 + View
Brassica oleracea BolC9t54763H C9 - View
Brassica oleracea BolC9t54557H C9 + View
Brassica rapa BraA09t37182Z A09 - View
Brassica rapa BraA04t17090Z A04 + View
Brassica rapa BraA09t37031Z A09 + View
Beta vulgaris EL10Ac1g00421 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G774.51 PGAv.1.6.scaffold774 + View
Cannabis sativa CANSAT56G0336 NC_044371.1 - View
Cicer arietinum L. Ca_17528_v3 Ca_LG6_v3 - View
Corylus avellana Haze_15498 Similar to GL3: Transcription factor GLABRA 3 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_08785 Similar to GL3: Transcription factor GLABRA 3 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g14790 Putative Transcription factor GLABRA 3 chr8 + View
Citrus clementina Ciclev10019338m.g scaffold_3 - View
Citrus clementina Ciclev10019219m.g scaffold_3 - View
Ceratophyllum demersum CDE08G0583 6 + View
Carpinus fangiana Cfa012225 Cfa05 - View
Cardamine hirsuta CARHR213010 Myc-like anthocyanin regulatory protein Chr7 - View
Cardamine hirsuta CARHR248590 Myc anthocyanin regulatory protein Chr8 - View
Carya illinoinensis CiPaw.01G060900 PTHR11514:SF38 - TRANSCRIPTION FACTOR MYC1 Chr01 + View
Carya illinoinensis CiPaw.11G134700 PTHR11514//PTHR11514:SF37 - MYC // TRANSCRIPTION FACTOR EGL1-RELATED Chr11 - View
Carya illinoinensis CiPaw.12G092700 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Chr12 - View
Citrullus lanatus ClCG06G003710 Myc anthocyanin regulatory protein CG_Chr06 - View
Cucumis melo MELO3C021212.2 Basic helix-loop-helix transcription factor chr11 + View
Corchorus olitorius COL.COLO4_34470 hypothetical protein AWUE01022397.1 + View
Capsella rubella Carub.0002s0120 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED scaffold_2 - View
Capsella rubella Carub.0006s3678 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 scaffold_6 + View
Capsella rubella Carub.0007s3418 KOG4447 - Transcription factor TWIST scaffold_7 - View
Cucumis sativus L. CsaV3_6G000530 Basic helix-loop-helix transcription factor chr6 + View
Daucus carota DCAR_004632 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_000616 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv32479 GWHABJS00000020 + View
Davidia involucrata Dinv37636 GWHABJS00000017 - View
Davidia involucrata Dinv38935 GWHABJS00000003 + View
Durio zibethinus Duzib138G0897 NW_019167893.1 + View
Durio zibethinus Duzib068G0286 NW_019167838.1 + View
Durio zibethinus Duzib205G0016 NW_019168381.1 + View
Durio zibethinus Duzib084G1235 NW_019167827.1 + View
Erigeron canadensis ECA246G5235 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.D01841 Chr04 - View
Eucalyptus grandis Eucgr.D02287 Chr04 + View
Eucalyptus grandis Eucgr.E00624 Chr05 + View
Erythranthe guttata Migut.A00733 scaffold_1 + View
Erythranthe guttata Migut.E01090 scaffold_5 - View
Eutrema salsugineum Thhalv10023356m.g PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED scaffold_8 - View
Eutrema salsugineum Thhalv10029523m.g PTHR11514:SF38 - TRANSCRIPTION FACTOR MYC1 scaffold_3 - View
Eutrema salsugineum Thhalv10027709m.g PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED scaffold_14 - View
Fragaria x ananassa FAN06G0344 PTHR11514:SF38 - TRANSCRIPTION FACTOR MYC1 Fvb7-2 + View
Fragaria x ananassa FAN03G1456 PTHR11514:SF38 - TRANSCRIPTION FACTOR MYC1 Fvb7-3 - View
Fragaria x ananassa FAN04G1293 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Fvb5-4 + View
Fragaria x ananassa FAN13G2820 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Fvb5-2 + View
Fragaria x ananassa FAN06G2348 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 Fvb7-2 + View
Fragaria x ananassa FAN18G0722 PTHR11514//PTHR11514:SF37 - MYC // TRANSCRIPTION FACTOR EGL1-RELATED Fvb5-1 + View
Fragaria x ananassa FAN10G0094 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 Fvb7-1 + View
Fragaria x ananassa FAN08G3100 PTHR11514//PTHR11514:SF37 - MYC // TRANSCRIPTION FACTOR EGL1-RELATED Fvb5-3 - View
Fragaria vesca FvH4_7g14230 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 Fvb7 + View
Fragaria vesca FvH4_5g02520 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Fvb5 + View
Gossypium hirsutum Gohir.A11G088700 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 A11 + View
Gossypium hirsutum Gohir.A08G182800 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED A08 + View
Gossypium hirsutum Gohir.D11G022100 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED D11 + View
Gossypium hirsutum Gohir.D11G093000 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 D11 + View
Gossypium hirsutum Gohir.D08G201300 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED D08 + View
Gossypium hirsutum Gohir.A11G022400 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED A11 + View
Glycine max Glyma.08G014900 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Gm08 + View
Glycine max Glyma.05G208300 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Gm05 + View
Gossypium raimondii Gorai.007G099300 Chr07 + View
Gossypium raimondii Gorai.004G212200 Chr04 + View
Gossypium raimondii Gorai.007G023500 Chr07 + View
Helianthus annuus HanXRQChr06g0165851 Probable basic helix-loop-helix (bHLH) DNA-binding superfamily protein HanXRQChr06 + View
Lupinus albus Lalb_Chr16g0390021 PTHR11514//PTHR11514:SF37 - MYC // TRANSCRIPTION FACTOR EGL1-RELATED Lalb_Chr16 + View
Lupinus albus Lalb_Chr05g0224731 PTHR11514//PTHR11514:SF37 - MYC // TRANSCRIPTION FACTOR EGL1-RELATED Lalb_Chr05 - View
Lotus japonicus Lj4g0020907 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED chr4 - View
Lonicera japonica Lj8A221T74 GWHAAZE00000008 - View
Lonicera japonica Lj7C513T12 GWHAAZE00000007 - View
Lonicera japonica Lj2C185G6 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_3_6560 Lsat_1_v8_lg_3 + View
Malus domestica MD01G1060200 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr01 + View
Malus domestica MD06G1084400 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr06 + View
Malus domestica MD14G1105500 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr14 + View
Malus domestica MD07G1137500 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr07 - View
Manihot esculenta Manes.01G257200 Chromosome01 - View
Manihot esculenta Manes.05G034700 Chromosome05 - View
Medicago truncatula Medtr8g098275 bHLH transcription factor chr8 + View
Nelumbo nucifera Nn1g01527 chr1 + View
Nelumbo nucifera Nn6g33430 chr6 - View
Nicotiana tabacum Nitab4.5_0001615g0130 Myc-type, basic helix-loop-helix (bHLH) domain, Transcription factor MYC/MYB N-terminal Nitab4.5_0001615 - View
Petunia axillaris Peaxi162Scf00119g00942 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00119 + View
Punica granatum PGR031G3769 NC_045127.1 + View
Punica granatum PGR042G1989 NC_045130.1 - View
Punica granatum PGR031G3019 NC_045127.1 - View
Prunus persica Prupe.5G100700 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Pp05 + View
Prunus persica Prupe.2G170100 Pp02 + View
Pisum sativum Psat7g032960 BHLH-MYC and R2R3-MYB transcription factors N-terminal chr7LG7 - View
Populus trichocarpa Potri.002G159400 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 Chr02 + View
Populus trichocarpa Potri.014G083900 PTHR11514//PTHR11514:SF38 - MYC // TRANSCRIPTION FACTOR MYC1 Chr14 + View
Populus trichocarpa Potri.003G128000 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Chr03 + View
Populus trichocarpa Potri.001G103600 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Chr01 - View
Phaseolus vulgaris Phvul.010G098500 PTHR11514:SF38 - TRANSCRIPTION FACTOR MYC1 Chr10 - View
Phaseolus vulgaris Phvul.002G290000 Chr02 + View
Quercus lobata QL12p032851 12 - View
Quercus lobata QL08p048868 8 - View
Rosa chinensis RcHm_v2.0_Chr7g0197531 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim02G0231600 chr02 + View
Rhododendron simsii Rhsim07G0015600 chr07 - View
Striga asiatica SGA_v2.0_scaffold173G39176 scaffold173 - View
Salvia bowleyana SalBow1G2192 GWHASIU00000001 + View
Salix brachista Sabra01G0078300 GWHAAZH00000001 - View
Salix brachista Sabra14G0060900 GWHAAZH00000014 + View
Salix brachista Sabra02G0126600 GWHAAZH00000002 + View
Salix brachista Sabra03G0091100 GWHAAZH00000003 + View
Simmondsia chinensis Sc01g0003410 GWHAASQ00000001 + View
Simmondsia chinensis Sc01g0009610 GWHAASQ00000001 + View
Sechium edule Sed0005516 LG09 - View
Sapria himalayana SHI07140 scaffold4_21100006 + View
Solanum lycopersicum Solyc08g081140.4 bHLH transcription factor 090 SL4.0ch08 + View
Schrenkiella parvula Sp2g01010 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED ch2-1 - View
Schrenkiella parvula Sp7g00630 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED ch7-1 - View
Schrenkiella parvula SpUn0010_0110 PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED un0010 - View
Solanum pennellii Sopen08g029440 encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development. | GLABROUS 3 (GL3) | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG401012339 BHLH transcription factor JAF13 ST4.03ch08 + View
Selenicereus undatus Hund11466 Scaffold_10417 - View
Trochodendron aralioides TAR375G0580 group15 + View
Trochodendron aralioides TAR374G0290 group12 + View
Trochodendron aralioides TAR629G3280 group0 + View
Theobroma cacao Thecc.01G359500 Chromosome_1 - View
Theobroma cacao Thecc.03G279300 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104817999 transcription factor EGL1 NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104823586 transcription factor EGL1-like isoform X1 NW_010966881.1 + View
Trifolium pratense TPR.G12931 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI81G0152 NC_052251.1 + View
Utricularia gibba unitig_88.g27617 unitig_88 + View
Vaccinium macrocarpon vmacro13285 Similar to GL3: Transcription factor GLABRA 3 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro22818 Similar to GL3: Transcription factor GLABRA 3 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3445 CM024069.1 + View
Vigna mungo VMungo0331G1360 CM024078.1 + View
Vitis vinifera GSVIVG01026927001 chr15 - View
Vitis vinifera GSVIVG01019750001 chr2 - View