Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005729 PREDICTED: pentatricopeptide repeat-containing protein At4g18840 [Vitis vinifera] Chr8 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G8400 LG-2 + View
Aethionema arabicum Aa31LG6G14940 LG-6 - View
Actinidia chinensis Actinidia09526 Lachesis_group15 + View
Arabidopsis lyrata AL5G10510 scaffold_5 - View
Arabidopsis lyrata AL8G43172 scaffold_8 + View
Aquilegia oxysepala Aqoxy3G00119 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0T6BEW PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JZ24E9 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZNJH03 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT2G01510 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1)%3B Has 35573 Blast hits to 13630 proteins in 255 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 76%3B Fungi - 94%3B Plants - 34882%3B Viruses - 0%3B Other Eukaryotes - 514 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT5G65570 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC01g02787 ChrC01 + View
Brassica carinata BcaC06g31296 ChrC06 + View
Brassica napus A06p44380 A06 + View
Brassica napus C03p60200 C03 - View
Brassica napus A06p32410 A06 + View
Brassica oleracea BolC3t18282H C3 - View
Brassica rapa BraA06t26166Z A06 + View
Brassica rapa BraA06t27312Z A06 + View
Citrus clementina Ciclev10025041m.g scaffold_7 - View
Carpinus fangiana Cfa006778 Cfa02 - View
Cardamine hirsuta CARHR246740 Pentatricopeptide repeat-containing protein Chr7 - View
Cardamine hirsuta CARHR246410 Pentatricopeptide repeat-containing protein Chr7 - View
Cardamine hirsuta CARHR144070 Pentatricopeptide repeat-containing protein Chr5 - View
Capsella rubella Carub.0008s2642 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_8 + View
Daucus carota DCAR_026781 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv19022 GWHABJS00000014 + View
Davidia involucrata Dinv22010 GWHABJS00000011 + View
Eucalyptus grandis Eucgr.H02437 Chr08 - View
Eutrema salsugineum Thhalv10018157m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_9 + View
Eutrema salsugineum Thhalv10028034m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_14 + View
Eutrema salsugineum Thhalv10003720m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 - View
Fragaria x ananassa FAN26G0109 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb1-2 - View
Fragaria x ananassa FAN07G1607 PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-4 + View
Fragaria x ananassa FAN17G0379 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-2 + View
Fragaria x ananassa FAN23G0032 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-3 + View
Glycine max Glyma.02G094200 PF01535 - PPR repeat (PPR) Gm02 + View
Lupinus albus Lalb_Chr05g0216431 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr05 + View
Lotus japonicus Lj2g0026658 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr2 - View
Magnolia biondii MBI16_g10448_MAGBIO AED:0.02 Chr16 - View
Magnolia biondii MBI16_g11010_MAGBIO AED:0.11 Chr16 + View
Malus domestica MD13G1023400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr13 + View
Manihot esculenta Manes.18G055400 Chromosome18 - View
Medicago truncatula Medtr5g031490 pentatricopeptide (PPR) repeat protein chr5 - View
Medicago truncatula Medtr8g068150 SLOW growth protein, putative chr8 + View
Oryza sativa ssp. japonica Os01g0646000 Pentatricopeptide repeat domain containing protein. chr01 + View
Punica granatum PGR119G2504 NC_045132.1 - View
Papaver somniferum PSO478G2411 NC_039361.1 + View
Phaseolus vulgaris Phvul.004G055900 PTHR11240:SF16 - RIBONUCLEASE 2 Chr04 + View
Quercus lobata QL02p053805 CM012294 + View
Rhododendron simsii Rhsim05G0101400 chr05 - View
Simmondsia chinensis Sc11g0008700 GWHAASQ00000011 + View
Solanum lycopersicum Solyc02g063373.1 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_SOLLC) SL4.0ch02 + View
Schrenkiella parvula Sp7g35650 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) ch7-6 - View
Schrenkiella parvula Sp2g28670 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch2-4 + View
Solanum pennellii Sopen02g014460 Glycosyl hydrolase superfamily protein | FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Glycoside hydrolase, family 5 , Glycoside hydrolase, subgroup, catalytic core | BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein Spenn-ch02 + View
Trochodendron aralioides TAR625G1446 group4 + View
Trochodendron aralioides TAR622G1414 group8 - View
Theobroma cacao Thecc.08G076000 Tetratricopeptide repeat-like superfamily protein Chromosome_8 + View
Theobroma cacao Thecc.01G077300 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104820821 pentatricopeptide repeat-containing protein At3g03580 isoform X1 NW_010966372.1 + View
Tripterygium wilfordii TWI53G0042 NC_052244.1 + View
Vitis vinifera GSVIVG01030836001 chr14 - View
Vitis vinifera GSVIVG01011735001 chr1 - View