Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr4.2815 | chr4 | - | View | |
Actinidia chinensis | Actinidia01468 | Lachesis_group3 | + | View | |
Actinidia chinensis | Actinidia40262 | Lachesis_group22 | - | View | |
Arabidopsis lyrata | AL7G39540 | scaffold_7 | - | View | |
Avicennia marina | MSTRG.3927 | ScioBoG_102837_HRSCAF_103074 | - | View | |
Arabidopsis thaliana | AT4G15770 | RNA binding protein RNA binding%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: ribosome assembly%2C ribosome biogenesis%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947)%2C Ribosome biogenesis factor NIP7-like (InterPro:IPR005155)%2C Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478)%2C Ribosome biogenesis factor%2C NIP7 (InterPro:IPR016686)%3B Has 438 Blast hits to 438 proteins in 213 species: Archae - 5%3B Bacteria - 0%3B Metazoa - 151%3B Fungi - 132%3B Plants - 49%3B Viruses - 0%3B Other Eukaryotes - 101 (source: NCBI BLink). | Chr4 | + | View |
Corylus avellana | Haze_01219 | Protein of unknown function | 1 | - | View |
Citrus clementina | Ciclev10005994m.g | scaffold_9 | - | View | |
Carpinus fangiana | Cfa015376 | Cfa06 | + | View | |
Cardamine hirsuta | CARHR290260 | 60S ribosome subunit biogenesis protein NIP7, putative | NSCAFB.163 | + | View |
Carya illinoinensis | CiPaw.01G149400 | K07565 - 60S ribosome subunit biogenesis protein NIP7 (NIP7) | Chr01 | - | View |
Cucumis melo | MELO3C006657.2 | 60S ribosome subunit biogenesis protein NIP7 homolog | chr06 | + | View |
Capsella rubella | Carub.0007s2590 | K07565 - 60S ribosome subunit biogenesis protein NIP7 (NIP7) | scaffold_7 | - | View |
Cucumis sativus L. | CsaV3_3G014560 | 60S ribosome subunit biogenesis protein NIP7 homolog | chr3 | + | View |
Davidia involucrata | Dinv44388 | GWHABJS00000014 | + | View | |
Davidia involucrata | Dinv29769 | GWHABJS00000016 | - | View | |
Durio zibethinus | Duzib052G0564 | NW_019167849.1 | + | View | |
Durio zibethinus | Duzib212G1021 | NW_019168026.1 | - | View | |
Erythranthe guttata | Migut.G00171 | scaffold_7 | - | View | |
Eutrema salsugineum | Thhalv10026330m.g | K07565 - 60S ribosome subunit biogenesis protein NIP7 (NIP7) | scaffold_1 | - | View |
Hydrangea macrophylla | Hma1.2p1_0698F.1_g205210 | Hma1.2p1_0698F.1 | - | View | |
Lupinus albus | Lalb_Chr13g0303661 | PTHR23415:SF4 - 60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 HOMOLOG | Lalb_Chr13 | - | View |
Lonicera japonica | Lj6P674T13 | GWHAAZE00000006 | + | View | |
Manihot esculenta | Manes.03G194200 | Chromosome03 | + | View | |
Manihot esculenta | Manes.15G013200 | Chromosome15 | - | View | |
Nelumbo nucifera | Nn4g25890 | chr4 | - | View | |
Olea europaea | Oeu027731.1 | chr22 | - | View | |
Oryza sativa ssp. japonica | Os07g0670600 | Ribosome biogenesis factor, NIP7 domain containing protein. | chr07 | + | View |
Punica granatum | PGR031G1479 | NC_045127.1 | + | View | |
Populus trichocarpa | Potri.010G024400 | K07565 - 60S ribosome subunit biogenesis protein NIP7 (NIP7) | Chr10 | + | View |
Phaseolus vulgaris | Phvul.003G104500 | K07565 - 60S ribosome subunit biogenesis protein NIP7 (NIP7) | Chr03 | - | View |
Quercus lobata | QL06p008685 | 6 | + | View | |
Rhododendron simsii | Rhsim04G0220600 | chr04 | + | View | |
Striga asiatica | SGA_v2.0_scaffold67G22647 | scaffold67 | - | View | |
Salvia bowleyana | SalBow2G1272 | GWHASIU00000007 | - | View | |
Salix brachista | Sabra10G0014700 | GWHAAZH00000010 | - | View | |
Simmondsia chinensis | Sc19g0005120 | GWHAASQ00000019 | + | View | |
Sechium edule | Sed0020990 | LG02 | - | View | |
Sechium edule | Sed0024198 | LG12 | + | View | |
Sapria himalayana | SHI00272 | scaffold1_25991295 | - | View | |
Schrenkiella parvula | Sp7g14130 | K07565 - 60S ribosome subunit biogenesis protein NIP7 (NIP7) | ch7-4 | + | View |
Trochodendron aralioides | TAR362G1261 | group17 | - | View | |
Trochodendron aralioides | TAR633G1411 | group2 | + | View | |
Theobroma cacao | Thecc.04G283400 | RNA binding | Chromosome_4 | + | View |
Tarenaya hassleriana | THA.LOC104820258 | 60S ribosome subunit biogenesis protein NIP7 homolog | NW_010966178.1 | + | View |
Trifolium pratense | TPR.G3221 | Tp57577_TGAC_v2_LG1 | - | View | |
Tripterygium wilfordii | TWI53G0131 | NC_052244.1 | + | View | |
Vaccinium macrocarpon | vmacro08137 | Similar to nip7: 60S ribosome subunit biogenesis protein NIP7 homolog (Xenopus tropicalis OX%3D8364) | chr6_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vanilla planifolia | HPP92_025218 | 60S ribosome subunit biogenesis protein NIP7 homolog *** | CM028163.1 | + | View |
Vitis vinifera | GSVIVG01017749001 | chr5 | + | View |