Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0045524 Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 [Theobroma cacao] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G14350 LG-9 + View
Acer truncatum Atru.chr4.303 chr4 + View
Acer truncatum Atru.chr13.1959 chr13 - View
Actinidia chinensis Actinidia29562 Lachesis_group7 - View
Actinidia chinensis Actinidia33388 Lachesis_group27 - View
Arabidopsis lyrata AL1G48660 scaffold_1 + View
Avicennia marina MSTRG.24487 ScioBoG_4088_HRSCAF_4107 - View
Aquilegia oxysepala Aqoxy6G00460 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5BRB7E PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1)%3B Has 36841 Blast hits to 13999 proteins in 256 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 78%3B Fungi - 94%3B Plants - 36058%3B Viruses - 0%3B Other Eukaryotes - 603 (source: NCBI BLink). Chr1 + View
Corylus avellana Haze_25011 Similar to PCMP-H41: Pentatricopeptide repeat-containing protein At2g22070 (Arabidopsis thaliana OX%3D3702) 8 - View
Corylus avellana Haze_17836 Similar to PCMP-H68: Pentatricopeptide repeat-containing protein At1g34160 (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc07_g15840 Pentatricopeptide repeat-containing protein At2g22070 chr7 - View
Coffea canephora Cc10_g06350 Pentatricopeptide repeat-containing protein At1g34160 chr10 - View
Citrus clementina Ciclev10003512m.g scaffold_5 + View
Carpinus fangiana Cfa018253 Cfa07 - View
Carya illinoinensis CiPaw.16G006800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr16 - View
Citrullus lanatus ClCG01G019230 Pentatricopeptide repeat-containing protein, putative CG_Chr01 - View
Cucumis melo MELO3C030249.2 pentatricopeptide repeat-containing protein At1g34160 chr03 + View
Carica papaya Cpa.g.sc26.130 supercontig_26 + View
Carica papaya Cpa.g.sc26.67 supercontig_26 - View
Capsella rubella Carub.0001s3229 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_1 + View
Cucumis sativus L. CsaV3_6G004810 Pentatricopeptide repeat-containing protein chr6 - View
Cucumis sativus L. CsaV3_6G045920 Pentatricopeptide repeat chr6 - View
Daucus carota DCAR_001204 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv21970 GWHABJS00000021 - View
Davidia involucrata Dinv41015 GWHABJS00000002 + View
Durio zibethinus Duzib116G0309 NW_019167949.1 + View
Durio zibethinus Duzib052G0978 NW_019167849.1 + View
Erigeron canadensis ECA232G2455 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.F02666 Chr06 - View
Erythranthe guttata Migut.H02411 scaffold_8 - View
Erythranthe guttata Migut.N02935 scaffold_14 - View
Eutrema salsugineum Thhalv10010025m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_5 - View
Fragaria x ananassa FAN24G2249 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-2 + View
Fragaria x ananassa FAN15G1518 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 - View
Fragaria x ananassa FAN28G0652 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-1 - View
Fragaria vesca FvH4_2g12730 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2 - View
Fragaria vesca FvH4_5g38291 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5 - View
Gossypium hirsutum Gohir.A06G110900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A06 + View
Gossypium hirsutum Gohir.D06G114800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D06 - View
Gossypium hirsutum Gohir.D05G233100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D05 - View
Glycine max Glyma.05G182900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm05 - View
Gossypium raimondii Gorai.010G131200 Chr10 - View
Gossypium raimondii Gorai.009G241200 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0276F.1_g111010 Hma1.2p1_0276F.1 + View
Lotus japonicus Lj4g0016028 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr4 - View
Lonicera japonica Lj7A387T74 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_9_42680 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_9 + View
Magnolia biondii MBI02_g05740_MAGBIO AED:0.41 Chr02 + View
Magnolia biondii MBI02_g34270_MAGBIO AED:0.06 Chr02 + View
Malus domestica MD15G1440600 Pentatricopeptide repeat (PPR) superfamily protein Chr15 + View
Malus domestica MD10G1041300 Tetratricopeptide repeat (TPR)-like superfamily protein Chr10 + View
Malus domestica MD05G1037400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr05 + View
Manihot esculenta Manes.13G089920 Chromosome13 + View
Manihot esculenta Manes.02G186300 Chromosome02 + View
Manihot esculenta Manes.12G140200 Chromosome12 - View
Nicotiana tabacum Nitab4.5_0000433g0040 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000433 + View
Nicotiana tabacum Nitab4.5_0001000g0060 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0001000 - View
Olea europaea Oeu061456.1 chr7 + View
Petunia axillaris Peaxi162Scf00226g00033 Pentatricopeptide repeat-containing protein Peaxi162Scf00226 + View
Punica granatum PGR042G0926 NC_045130.1 - View
Papaver somniferum PSO541G4747 NC_039363.1 + View
Papaver somniferum PSO541G2654 NC_039363.1 - View
Populus trichocarpa Potri.007G085500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr07 + View
Populus trichocarpa Potri.005G199800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr05 + View
Quercus lobata QL06p032129 6 + View
Quercus lobata QL02p036317 CM012294 - View
Quercus lobata QL12p035430 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0240331 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr6g0273501 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0089000 chr11 + View
Salix brachista Sabra07G0070700 GWHAAZH00000007 + View
Salix brachista Sabra05G0152000 GWHAAZH00000005 + View
Sechium edule Sed0010762 LG03 + View
Solanum lycopersicum Solyc04g054290.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WLY5_CAPBA) SL4.0ch04 + View
Solanum lycopersicum Solyc04g072170.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VQR8_CAPBA) SL4.0ch04 + View
Schrenkiella parvula Sp1g29400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch1-1 + View
Solanum pennellii Sopen04g028340 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400012801 Pentatricopeptide repeat-containing protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400031152 Pentatricopeptide repeat-containing protein ST4.03ch04 + View
Trochodendron aralioides TAR628G0597 group5 + View
Trochodendron aralioides TAR381G0594 group11 + View
Theobroma cacao Thecc.08G196500 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_8 + View
Trifolium pratense TPR.G2208 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI60G0290 NC_052246.1 + View
Vigna mungo VMungo0464G1427 CM024077.1 + View
Vitis vinifera GSVIVG01013673001 chr18_random - View