Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G8630 LG-4 - View
Acer truncatum Atru.chr13.1734 chr13 - View
Arabidopsis lyrata AL6G43110 scaffold_6 - View
Arabidopsis lyrata AL2G31590 scaffold_2 + View
Arabidopsis thaliana AT1G71980 Protease-associated (PA) RING/U-box zinc finger family protein Protease-associated (PA) RING/U-box zinc finger family protein%3B FUNCTIONS IN: peptidase activity%2C zinc ion binding%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G22670.1)%3B Has 15658 Blast hits to 9675 proteins in 411 species: Archae - 0%3B Bacteria - 271%3B Metazoa - 3014%3B Fungi - 1211%3B Plants - 4865%3B Viruses - 29%3B Other Eukaryotes - 6268 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G35625 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: peptidase activity%2C zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G35630.1)%3B Has 8074 Blast hits to 8052 proteins in 237 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2068%3B Fungi - 599%3B Plants - 4611%3B Viruses - 2%3B Other Eukaryotes - 794 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT4G09560 Protease-associated (PA) RING/U-box zinc finger family protein Protease-associated (PA) RING/U-box zinc finger family protein%3B FUNCTIONS IN: peptidase activity%2C zinc ion binding%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G71980.1)%3B Has 8638 Blast hits to 8590 proteins in 307 species: Archae - 0%3B Bacteria - 82%3B Metazoa - 2131%3B Fungi - 686%3B Plants - 4708%3B Viruses - 16%3B Other Eukaryotes - 1015 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC08g46642 ChrC08 + View
Brassica carinata BcaB03g14920 ChrB03 + View
Brassica napus A03p28600 A03 - View
Brassica napus C06p46080 C06 + View
Brassica oleracea BolC6t39661H C6 + View
Brassica rapa BraA03t12061Z A03 - View
Brassica rapa BraA07t31380Z A07 + View
Beta vulgaris EL10Ac1g00091 K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) Chr1_EL10_PGA_scaffold3 + View
Cicer arietinum L. Ca_10623_v3 Ca_LG4_v3 - View
Citrus clementina Ciclev10001161m.g scaffold_5 - View
Cardamine hirsuta CARHR064800 RING finger protein 13 Chr2 + View
Cucumis melo MELO3C008126.2 receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X2 chr03 + View
Carica papaya Cpa.g.sc66.32 supercontig_66 - View
Chenopodium quinoa AUR62004638 RMR2: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 C_Quinoa_Scaffold_4250 + View
Capsella rubella Carub.0002s1876 PTHR22765//PTHR22765:SF46 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_2 + View
Capsella rubella Carub.0001s3322 K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) scaffold_1 - View
Cucumis sativus L. CsaV3_2G033530 receptor homology region, transmembrane domain- and RING domain-containing protein 2-like chr2 + View
Davidia involucrata Dinv15071 GWHABJS00000011 - View
Durio zibethinus Duzib116G0724 NW_019167949.1 + View
Durio zibethinus Duzib177G0003 NW_019168004.1 + View
Eucalyptus grandis Eucgr.F02605 Chr06 - View
Erythranthe guttata Migut.C01260 scaffold_3 + View
Eutrema salsugineum Thhalv10028665m.g K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) scaffold_3 + View
Eutrema salsugineum Thhalv10018545m.g PTHR22765//PTHR22765:SF46 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_9 - View
Gossypium hirsutum Gohir.D05G276500 PTHR22765//PTHR22765:SF46 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D05 - View
Lotus japonicus Lj5g0007708 K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) chr5 + View
Manihot esculenta Manes.18G102200 Chromosome18 + View
Medicago truncatula Medtr1g096780 protease-associated (PA) RING/U-box zinc finger protein chr1 - View
Nelumbo nucifera Nn5g27661 chr5 - View
Papaver somniferum PSO063G0997 NC_039364.1 - View
Populus trichocarpa Potri.013G111500 K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) Chr13 - View
Populus trichocarpa Potri.019G082500 K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) Chr19 - View
Phaseolus vulgaris Phvul.007G088600 K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) Chr07 + View
Rhododendron simsii Rhsim06G0094500 chr06 + View
Rhododendron simsii Rhsim11G0058100 chr11 - View
Salix brachista Sabra13G0095000 GWHAAZH00000013 - View
Salix brachista Sabra19G0094100 GWHAAZH00000019 - View
Schrenkiella parvula Sp5g27050 PTHR22765//PTHR22765:SF46 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch5-6 + View
Schrenkiella parvula Sp1g30350 K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) ch1-1 - View
Selenicereus undatus Hund27090 Scaffold_2055 + View
Selenicereus undatus Hund16794 Scaffold_33675 - View
Trochodendron aralioides TAR381G1206 group11 + View
Theobroma cacao Thecc.08G184700 Protease-associated RING/U-box zinc finger family protein Chromosome_8 + View
Vaccinium macrocarpon vmacro12485 Similar to RMR2: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View