Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0048305 PREDICTED: uncharacterized protein LOC104102866 [Nicotiana tomentosiformis] Chr8 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G12280 LG-6 - View
Aethionema arabicum Aa31LG6G2590 LG-6 + View
Acer truncatum Atru.chr10.243 chr10 - View
Arabidopsis lyrata AL8G14850 scaffold_8 + View
Arabidopsis lyrata AL1G45150 scaffold_1 - View
Arabidopsis lyrata AL4G30930 scaffold_4 - View
Avicennia marina MSTRG.7611 ScioBoG_102840_HRSCAF_103099 + View
Aquilegia oxysepala Aqoxy1G01366 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.63SYA1 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X5K9YD PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XP2BFV PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT1G30860 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: stem%2C stamen%2C pollen tube%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G34920.1)%3B Has 4912 Blast hits to 4241 proteins in 362 species: Archae - 9%3B Bacteria - 172%3B Metazoa - 2090%3B Fungi - 292%3B Plants - 512%3B Viruses - 97%3B Other Eukaryotes - 1740 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT4G20160 golgin family A protein LOCATED IN: chloroplast%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G30860.1)%3B Has 64917 Blast hits to 39974 proteins in 1949 species: Archae - 279%3B Bacteria - 7425%3B Metazoa - 26604%3B Fungi - 5788%3B Plants - 3193%3B Viruses - 275%3B Other Eukaryotes - 21353 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G44690 RING finger PFF0165c-like protein unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20160.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G34920 RING/U-box superfamily protein embryo sac development arrest 18 (EDA18)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: embryo sac development%2C pollen development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G30860.1)%3B Has 2267 Blast hits to 2247 proteins in 225 species: Archae - 3%3B Bacteria - 29%3B Metazoa - 1450%3B Fungi - 60%3B Plants - 428%3B Viruses - 44%3B Other Eukaryotes - 253 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB02g09496 ChrB02 + View
Brassica carinata BcaB04g18202 ChrB04 + View
Brassica carinata BcaB06g28820 ChrB06 + View
Brassica carinata BcaC05g27124 ChrC05 - View
Brassica carinata BcaB07g32752 ChrB07 - View
Brassica carinata BcaC02g07748 ChrC02 + View
Brassica napus C05p30090 C05 - View
Brassica napus A01p11910 A01 + View
Brassica napus A09p35290 A09 + View
Brassica napus C01p14150 C01 + View
Brassica napus A08p10930 A08 + View
Brassica oleracea BolC8t48190H C8 + View
Brassica oleracea BolC2t10557H C2 - View
Brassica oleracea BolC1t01379H C1 + View
Brassica oleracea BolC5t31745H C5 - View
Brassica rapa BraA09t39058Z A09 + View
Brassica rapa BraA01t01133Z A01 + View
Brassica rapa BraA08t33090Z A08 + View
Cicer arietinum L. Ca_02402_v3 Ca_LG1_v3 + View
Corylus avellana Haze_05193 Similar to XBOS34: Probable E3 ubiquitin-protein ligase XBOS34 (Oryza sativa subsp. japonica OX%3D39947) 2 - View
Coffea canephora Cc09_g04670 Putative Predicted protein chr9 - View
Citrus clementina Ciclev10014128m.g scaffold_2 - View
Ceratophyllum demersum CDE02G1544 1 - View
Carpinus fangiana Cfa001158 Cfa01 + View
Cardamine hirsuta CARHR030350 RING/U-box superfamily protein Chr1 - View
Cardamine hirsuta CARHR129070 RING/U-box superfamily protein Chr4 - View
Cardamine hirsuta CARHR226990 LOCATED IN: chloroplast Chr7 + View
Carya illinoinensis CiPaw.09G140200 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Chr09 + View
Citrullus lanatus ClCG01G025930 RING/U-box superfamily protein CG_Chr01 + View
Cucumis melo MELO3C006998.2 RING/U-box superfamily protein chr08 - View
Capsella rubella Carub.0007s2097 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED scaffold_7 - View
Capsella rubella Carub.0001s2920 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED scaffold_1 - View
Capsella rubella Carub.0008s0357 scaffold_8 + View
Capsella rubella Carub.0004s1660 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED scaffold_4 - View
Cucumis sativus L. CsaV3_6G053140 RING/U-box superfamily protein chr6 + View
Daucus carota DCAR_004358 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv17882 GWHABJS00000002 - View
Durio zibethinus Duzib132G0266 NW_019167915.1 - View
Erigeron canadensis ECA238G3617 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.E04326 Chr05 + View
Erythranthe guttata Migut.M02031 scaffold_13 + View
Eutrema salsugineum Thhalv10016344m.g PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED scaffold_10 - View
Eutrema salsugineum Thhalv10024247m.g PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED scaffold_1 - View
Eutrema salsugineum Thhalv10006896m.g PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED scaffold_5 + View
Fragaria x ananassa FAN11G3010 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Fvb3-4 - View
Fragaria x ananassa FAN16G0054 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Fvb3-3 + View
Fragaria x ananassa FAN21G1127 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Fvb3-2 + View
Fragaria x ananassa FAN25G3497 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Fvb3-1 - View
Fragaria vesca FvH4_3g13290 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Fvb3 + View
Gossypium hirsutum Gohir.A12G050800 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.D12G049100 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED D12 + View
Glycine max Glyma.09G048200 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Gm09 - View
Glycine max Glyma.15G155500 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Gm15 - View
Gossypium raimondii Gorai.008G052000 Chr08 + View
Lupinus albus Lalb_Chr18g0051941 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Lalb_Chr18 - View
Lupinus albus Lalb_Chr15g0083671 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Lalb_Chr15 - View
Lotus japonicus Lj6g0024369 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED chr6 + View
Lotus japonicus Lj4g0005018 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED chr4 - View
Lonicera japonica Lj2A341T40 GWHAAZE00000002 - View
Lonicera japonica Lj1A1151T86 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_107201 Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_2_59740 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Lsat_1_v8_lg_2 - View
Magnolia biondii MBI02_g17881_MAGBIO AED:0.05 Chr02 + View
Malus domestica MD05G1243100 RING/U-box superfamily protein Chr05 - View
Malus domestica MD10G1225200 RING/U-box superfamily protein Chr10 - View
Manihot esculenta Manes.03G072400 Chromosome03 + View
Manihot esculenta Manes.16G058900 Chromosome16 + View
Medicago truncatula Medtr2g437720 zinc finger, C3HC4 type (RING finger) protein chr2 - View
Medicago truncatula Medtr4g094795 zinc finger, C3HC4 type (RING finger) protein chr4 - View
Nelumbo nucifera Nn7g38417 chr7 + View
Nicotiana tabacum Nitab4.5_0001815g0030 Zinc finger, RING/FYVE/PHD-type, Ubiquitin-protein ligase E3 MDM2, Zinc finger, RING-type Nitab4.5_0001815 + View
Punica granatum PGR042G0834 NC_045130.1 - View
Prunus persica Prupe.4G120300 Pp04 + View
Pisum sativum Psat1g151440 Zinc finger + C3HC4 type (RING finger) chr1LG6 + View
Populus trichocarpa Potri.001G074800 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Chr01 - View
Populus trichocarpa Potri.003G156400 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.009G244700 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED Chr09 + View
Quercus lobata QL11p010904 11 - View
Rosa chinensis RcHm_v2.0_Chr5g0021761 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0135800 chr13 + View
Striga asiatica SGA_v2.0_scaffold423G51455 scaffold423 - View
Salvia bowleyana SalBow8G5620 GWHASIU00000004 + View
Salix brachista Sabra01G0052900 GWHAAZH00000001 - View
Salix brachista Sabra03G0113400 GWHAAZH00000003 + View
Sechium edule Sed0018505 LG14 + View
Solanum lycopersicum Solyc10g005220.3 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B041_ARATH) SL4.0ch10 - View
Solanum lycopersicum Solyc02g082100.4 RING/U-box superfamily protein (AHRD V3.3 *-* F4IIX4_ARATH) SL4.0ch02 + View
Schrenkiella parvula Sp7g18590 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED ch7-4 + View
Schrenkiella parvula Sp1g26760 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED ch1-1 - View
Schrenkiella parvula Sp2g09500 PTHR10044 - INHIBITOR OF APOPTOSIS ch2-4 - View
Schrenkiella parvula Sp4g17220 PTHR10044//PTHR10044:SF103 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED ch4-6 - View
Solanum pennellii Sopen02g026760 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: stem, stamen, pollen tube | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG401013630 Ubiquitin-protein ligase ST4.03ch02 + View
Trochodendron aralioides TAR626G1817 group3 + View
Trochodendron aralioides TAR624G0505 group9 - View
Theobroma cacao Thecc.02G001500 RING/U-box superfamily protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104811913 uncharacterized protein LOC104811913 NW_010960187.1 + View
Tripterygium wilfordii TWI38G0101 NC_052252.1 + View
Tripterygium wilfordii TWI63G1213 NC_052240.1 + View
Vaccinium macrocarpon vmacro03570 Similar to neur: Protein neuralized (Drosophila virilis OX%3D7244) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2226 CM024072.1 - View