Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0037711 PREDICTED: E3 ubiquitin-protein ligase ATL6 [Vitis vinifera] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G15570 LG-5 + View
Aethionema arabicum Aa31LG11G9190 LG-11 + View
Actinidia chinensis Actinidia05720 Lachesis_group20 - View
Arabidopsis lyrata AL3G15620 scaffold_3 + View
Amaranthus hybridus Ah.06g190040 RING-H2 finger protein ATL34 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL34) AmaHy_arrow1_Scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ED1SF9 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT3G05200 RING/U-box superfamily protein Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). ATL6%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1)%3B Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2610%3B Fungi - 790%3B Plants - 5036%3B Viruses - 50%3B Other Eukaryotes - 1461 (source: NCBI BLink). Chr3 + View
Brassica napus A06p37530 A06 - View
Brassica oleracea BolC7t44603H C7 + View
Brassica rapa BraA06t26675Z A06 - View
Beta vulgaris EL10Ac4g09315 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Chr4_EL10_PGA_scaffold1 + View
Cannabis sativa CANSAT54G2491 NC_044375.1 + View
Cicer arietinum L. Ca_09370_v3 Ca_LG3_v3 + View
Corylus avellana Haze_04231 Similar to ATL6: E3 ubiquitin-protein ligase ATL6 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g33750 Putative E3 ubiquitin-protein ligase ATL6 chr2 - View
Citrus clementina Ciclev10001478m.g scaffold_5 + View
Carpinus fangiana Cfa006551 Cfa02 + View
Cardamine hirsuta CARHR186030 Ring finger protein, putative Chr6 + View
Cardamine hirsuta CARHR079540 Ring finger protein, putative Chr3 + View
Carya illinoinensis CiPaw.08G166400 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Chr08 - View
Carya illinoinensis CiPaw.07G015000 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Chr07 + View
Citrullus lanatus ClCG02G015970 RING finger family protein CG_Chr02 - View
Chenopodium quinoa AUR62000873 ATL6: E3 ubiquitin-protein ligase ATL6 C_Quinoa_Scaffold_2088 + View
Chenopodium quinoa AUR62005087 ATL48: RING-H2 finger protein ATL48 C_Quinoa_Scaffold_3820 + View
Capsella rubella Carub.0003s0445 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) scaffold_3 + View
Cucumis sativus L. CsaV3_2G005080 E3 ubiquitin-protein ligase ATL6 chr2 + View
Davidia involucrata Dinv40261 GWHABJS00000005 - View
Davidia involucrata Dinv23971 GWHABJS00000002 + View
Durio zibethinus Duzib128G0377 NW_019168481.1 - View
Durio zibethinus Duzib177G1045 NW_019168004.1 + View
Eucalyptus grandis Eucgr.H04469 Chr08 + View
Fragaria x ananassa FAN09G0329 KOG1493 - Anaphase-promoting complex (APC), subunit 11 Fvb6-2 - View
Fragaria x ananassa FAN05G1550 KOG1493 - Anaphase-promoting complex (APC), subunit 11 Fvb6-3 + View
Fragaria vesca FvH4_6g05450 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Fvb6 + View
Gossypium hirsutum Gohir.D13G179100 PF13639 - Ring finger domain (zf-RING_2) D13 + View
Gossypium hirsutum Gohir.D11G273500 PF13639 - Ring finger domain (zf-RING_2) D11 + View
Gossypium hirsutum Gohir.A13G173400 PF13639 - Ring finger domain (zf-RING_2) A13 + View
Glycine max Glyma.10G156500 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Gm10 - View
Glycine max Glyma.20G231900 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Gm20 + View
Glycine max Glyma.19G236800 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Gm19 - View
Gossypium raimondii Gorai.013G204400 Chr13 + View
Hydrangea macrophylla Hma1.2p1_0666F.1_g199510 Hma1.2p1_0666F.1 + View
Lupinus albus Lalb_Chr15g0077131 PF13639 - Ring finger domain (zf-RING_2) Lalb_Chr15 + View
Lotus japonicus Lj5g0015549 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) chr5 - View
Lonicera japonica Lj9P683T10 GWHAAZE00000009 + View
Lonicera japonica Lj7A474T27 GWHAAZE00000007 - View
Malus domestica MD04G1208600 RING/U-box superfamily protein Chr04 - View
Malus domestica MD12G1222600 RING/U-box superfamily protein Chr12 - View
Manihot esculenta Manes.09G164200 Chromosome09 + View
Medicago truncatula Medtr7g113800 RING-H2 zinc finger protein chr7 - View
Medicago truncatula Medtr1g082550 zinc finger, C3HC4 type (RING finger) protein, putative chr1 + View
Punica granatum PGR031G1601 NC_045127.1 - View
Prunus persica Prupe.6G329500 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Pp06 - View
Populus trichocarpa Potri.013G025800 KOG0823//KOG1493 - Predicted E3 ubiquitin ligase // Anaphase-promoting complex (APC), subunit 11 Chr13 - View
Phaseolus vulgaris Phvul.007G181800 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Chr07 - View
Quercus lobata QL03p004568 3 + View
Rosa chinensis RcHm_v2.0_Chr3g0454221 RcHm_v2.0_Chr3 + View
Salix brachista Sabra05G0037200 GWHAAZH00000005 - View
Salix brachista Sabra13G0026900 GWHAAZH00000013 - View
Simmondsia chinensis Sc09g0003300 GWHAASQ00000009 + View
Sechium edule Sed0019371 LG08 + View
Schrenkiella parvula Sp3g04050 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) ch3-1 + View
Solanum tuberosum PGSC0003DMG400028579 Gene of unknown function ST4.03ch01 + View
Theobroma cacao Thecc.05G307400 RING/U-box superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104818679 E3 ubiquitin-protein ligase ATL31 NW_010966177.1 + View
Trifolium pratense TPR.G33199 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI56G1426 NC_052242.1 + View
Tripterygium wilfordii TWI12G0765 NC_052243.1 - View
Vitis vinifera GSVIVG01000015001 chr14 + View