Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008121 hypothetical protein POPTR_0010s15770g, partial [Populus trichocarpa] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G28560 LG-1 + View
Acer truncatum Atru.chr5.964 chr5 + View
Actinidia chinensis Actinidia21385 Lachesis_group19 - View
Arabidopsis lyrata AL4G46870 scaffold_4 + View
Avicennia marina MSTRG.21704 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.18086 ScioBoG_22153_HRSCAF_22259 + View
Amaranthus hybridus Ah.11g049000 Flowering time control protein FCA AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy2G02692 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.26UA7Y K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R0SDX6 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT2G47310 flowering time control protein-related / FCA gamma-like protein flowering time control protein-related / FCA gamma-related%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C WW/Rsp5/WWP (InterPro:IPR001202)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA binding%3Babscisic acid binding (TAIR:AT4G16280.4)%3B Has 13219 Blast hits to 10590 proteins in 472 species: Archae - 0%3B Bacteria - 420%3B Metazoa - 8082%3B Fungi - 1429%3B Plants - 2128%3B Viruses - 0%3B Other Eukaryotes - 1160 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB06g29453 ChrB06 - View
Brassica carinata BcaB01g03173 ChrB01 - View
Brassica carinata BcaC01g05037 ChrC01 - View
Brassica napus A03p25900 A03 + View
Brassica rapa BraA03t11806Z A03 + View
Beta vulgaris EL10As5g23564 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Scaffold_0005 - View
Cannabis sativa CANSAT25G3309 NC_044370.1 - View
Cicer arietinum L. Ca_09222_v3 Ca_LG3_v3 - View
Coffea canephora Cc03_g00650 Putative uncharacterized protein chr3 + View
Coffea canephora Cc01_g21610 Hypothetical protein chr1 - View
Citrus clementina Ciclev10006289m.g scaffold_9 + View
Citrus clementina Ciclev10019644m.g scaffold_3 - View
Carpinus fangiana Cfa005762 Cfa02 + View
Cardamine hirsuta CARHR142700 Cugbp, Elav-like family member 5 Chr4 + View
Carya illinoinensis CiPaw.07G119600 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Chr07 - View
Citrullus lanatus ClCG10G011580 CUGBP Elav-like family member 1 CG_Chr10 - View
Cucumis melo MELO3C012931.2 flowering time control protein FCA chr04 + View
Carica papaya Cpa.g.sc18.84 supercontig_18 - View
Chenopodium quinoa AUR62011774 FCA: Flowering time control protein FCA C_Quinoa_Scaffold_2008 + View
Chenopodium quinoa AUR62024617 FCA: Flowering time control protein FCA C_Quinoa_Scaffold_1992 + View
Capsella rubella Carub.0004s3003 PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED scaffold_4 + View
Cucumis sativus L. CsaV3_3G026590 flowering time control protein FCA chr3 + View
Daucus carota DCAR_002884 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv33135 GWHABJS00000010 - View
Davidia involucrata Dinv10122 GWHABJS00000007 + View
Durio zibethinus Duzib138G0012 NW_019167893.1 + View
Durio zibethinus Duzib151G0245 NW_019167904.1 - View
Eucalyptus grandis Eucgr.H00995 Chr08 + View
Eucalyptus grandis Eucgr.H04064 Chr08 - View
Erythranthe guttata Migut.D00063 scaffold_4 + View
Eutrema salsugineum Thhalv10001438m.g PTHR24012:SF382 - FLOWERING TIME CONTROL PROTEIN FCA-RELATED scaffold_22 + View
Fragaria x ananassa FAN19G1491 PTHR24012:SF382 - FLOWERING TIME CONTROL PROTEIN FCA-RELATED Fvb1-4 + View
Fragaria x ananassa FAN26G1997 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb1-2 + View
Fragaria x ananassa FAN23G1993 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb1-3 + View
Fragaria vesca FvH4_1g26970 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb1 + View
Gossypium hirsutum Gohir.D07G133600 PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED D07 - View
Gossypium hirsutum Gohir.A07G129200 PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED A07 - View
Glycine max Glyma.19G217900 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Gm19 - View
Glycine max Glyma.03G220900 KOG0131//KOG0144//KOG0148 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Gm03 - View
Gossypium raimondii Gorai.001G144900 Chr01 - View
Helianthus annuus HanXRQChr04g0106241 Putative WW domain; Nucleotide-binding alpha-beta plait domain; Flowering time control protein FCA HanXRQChr04 - View
Hydrangea macrophylla Hma1.2p1_0408F.1_g146520 Hma1.2p1_0408F.1 + View
Lupinus albus Lalb_Chr15g0077991 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Lalb_Chr15 - View
Lotus japonicus Lj1g0027953 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) chr1 - View
Lonicera japonica Lj6A693T65 GWHAAZE00000006 - View
Malus domestica MD09G1285500 flowering time control protein-related / FCA gamma-related Chr09 - View
Manihot esculenta Manes.15G001500 Chromosome15 + View
Manihot esculenta Manes.01G230100 Chromosome01 - View
Medicago truncatula Medtr4g122650 flowering time control FCA-like protein chr4 - View
Medicago truncatula Medtr7g109810 flowering time control FCA-like protein chr7 - View
Nelumbo nucifera Nn3g21739 chr3 + View
Nelumbo nucifera Nn4g25557 chr4 - View
Punica granatum PGR083G2330 NC_045133.1 + View
Prunus persica Prupe.3G008500 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Pp03 + View
Pisum sativum Psat3g019280 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr3LG5 + View
Populus trichocarpa Potri.002G192900 PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED Chr02 + View
Phaseolus vulgaris Phvul.001G214500 Chr01 - View
Quercus lobata QL12p019026 12 + View
Rosa chinensis RcHm_v2.0_Chr3g0487191 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim13G0003200 chr13 + View
Striga asiatica SGA_v2.0_scaffold376G50291 scaffold376 - View
Salix brachista Sabra14G0087600 GWHAAZH00000014 + View
Salix brachista Sabra02G0163000 GWHAAZH00000002 - View
Salix brachista Sabra10G0114000 GWHAAZH00000010 - View
Simmondsia chinensis Sc17g0000320 GWHAASQ00000017 + View
Schrenkiella parvula Sp4g29260 KOG0131//KOG0148 - Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) ch4-6 + View
Trochodendron aralioides TAR636G2324 group1 + View
Trochodendron aralioides TAR365G0946 group16 + View
Theobroma cacao Thecc.01G316900 RNA binding Chromosome_1 - View
Trifolium pratense TPR.G4031 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI36G1783 NC_052237.1 - View
Tripterygium wilfordii TWI73G1144 NC_052232.1 - View
Vaccinium macrocarpon vmacro02387 Similar to FCA: Flowering time control protein FCA (Oryza sativa subsp. indica OX%3D39946) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3554 CM024070.1 - View
Vitis vinifera GSVIVG01028149001 chr7 - View
Vitis vinifera GSVIVG01034966001 chr5 + View