Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G370 LG-7 - View
Aethionema arabicum Aa31LG4G760 LG-4 - View
Acer truncatum Atru.chr7.2478 chr7 - View
Actinidia chinensis Actinidia15972 Lachesis_group9 - View
Actinidia chinensis Actinidia08954 Lachesis_group2 - View
Arabidopsis lyrata AL2G40980 scaffold_2 + View
Avicennia marina MSTRG.4698 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.01g020390 Protein TOPLESS (WUS-interacting protein 1) AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy7G03596 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R5Z1TJ PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UFRA39 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8X014Y PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YQ829I PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT1G80490 TOPLESS-related 1 TOPLESS-related 1 (TPR1)%3B INVOLVED IN: primary shoot apical meristem specification%3B LOCATED IN: cytosol%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C CTLH%2C C-terminal LisH motif (InterPro:IPR006595)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4)%3B Has 22237 Blast hits to 13013 proteins in 584 species: Archae - 42%3B Bacteria - 4724%3B Metazoa - 7551%3B Fungi - 4719%3B Plants - 2339%3B Viruses - 15%3B Other Eukaryotes - 2847 (source: NCBI BLink). TOPLESS-related 1 (TPR1)%3B INVOLVED IN: primary shoot apical meristem specification%3B LOCATED IN: cytosol%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C CTLH%2C C-terminal LisH motif (InterPro:IPR006595)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB02g07267 ChrB02 + View
Brassica carinata BcaC08g45317 ChrC08 - View
Brassica napus A06p11740 A06 - View
Brassica napus C05p13890 C05 - View
Brassica napus C06p29180 C06 - View
Brassica oleracea BolC6t38082H C6 - View
Brassica oleracea BolC5t30123H C5 - View
Brassica rapa BraA06t24342Z A06 + View
Brassica rapa BraA07t30313Z A07 - View
Beta vulgaris EL10Ac9g21867 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Chr9_EL10_PGA_scaffold8 + View
Cannabis sativa CANSAT56G1741 NC_044371.1 - View
Cicer arietinum L. Ca_01045_v3 Ca_LG1_v3 + View
Corylus avellana Haze_16607 Similar to TPR1: Topless-related protein 1 (Arabidopsis thaliana OX%3D3702) 11 - View
Corylus avellana Haze_21482 Similar to TPR1: Topless-related protein 1 (Arabidopsis thaliana OX%3D3702) 3 - View
Citrus clementina Ciclev10024745m.g scaffold_7 - View
Carpinus fangiana Cfa013118 Cfa05 + View
Carpinus fangiana Cfa001935 Cfa01 + View
Cardamine hirsuta CARHR016240 WD-repeat protein, putative Chr1 - View
Carya illinoinensis CiPaw.01G250700 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr01 - View
Carya illinoinensis CiPaw.02G158700 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Chr02 - View
Carya illinoinensis CiPaw.07G225800 KOG0266//KOG0293//KOG0315 - WD40 repeat-containing protein // WD40 repeat-containing protein // G-protein beta subunit-like protein (contains WD40 repeats) Chr07 - View
Citrullus lanatus ClCG05G016670 Ramosa1 enhancer locus 2 protein CG_Chr05 - View
Citrullus lanatus ClCG07G012290 WD-repeat protein, putative CG_Chr07 - View
Cucumis melo MELO3C017848.2 protein TOPLESS chr07 - View
Carica papaya Cpa.g.sc10.139 supercontig_10 + View
Chenopodium quinoa AUR62011475 TPL: Protein TOPLESS C_Quinoa_Scaffold_3333 + View
Chenopodium quinoa AUR62016287 TPL: Protein TOPLESS C_Quinoa_Scaffold_3514 + View
Capsella rubella Carub.0001s1552 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_1 - View
Capsella rubella Carub.0002s2707 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_2 + View
Cucumis sativus L. CsaV3_4G001850 protein TOPLESS chr4 + View
Daucus carota DCAR_021358 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_016269 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv30638 GWHABJS00000019 + View
Davidia involucrata Dinv15870 GWHABJS00000017 - View
Davidia involucrata Dinv18194 GWHABJS00000003 - View
Davidia involucrata Dinv38144 GWHABJS00000006 + View
Durio zibethinus Duzib160G0868 NW_019168015.1 + View
Erigeron canadensis ECA232G4370 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA246G1832 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.F03923 Chr06 - View
Erythranthe guttata Migut.I00737 scaffold_9 + View
Erythranthe guttata Migut.D01078 scaffold_4 - View
Eutrema salsugineum Thhalv10006622m.g PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_5 + View
Eutrema salsugineum Thhalv10018037m.g PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_9 - View
Fragaria x ananassa FAN14G5551 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6-1 - View
Fragaria x ananassa FAN05G5346 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6-3 - View
Fragaria x ananassa FAN09G3819 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Fvb6-2 - View
Fragaria x ananassa FAN02G0740 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6-4 + View
Fragaria vesca FvH4_2g28620 PTHR22847//PTHR22847:SF446 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb2 - View
Fragaria vesca FvH4_1g02730 PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Fvb1 + View
Fragaria vesca FvH4_6g29170 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D06G190900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED D06 + View
Gossypium hirsutum Gohir.A05G121900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED A05 + View
Gossypium hirsutum Gohir.D05G122800 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED D05 + View
Gossypium hirsutum Gohir.A06G183900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED A06 + View
Gossypium hirsutum Gohir.D09G086200 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED D09 - View
Gossypium hirsutum Gohir.A09G086100 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED A09 - View
Glycine max Glyma.08G214600 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm08 - View
Glycine max Glyma.07G028000 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm07 + View
Glycine max Glyma.15G006100 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm15 + View
Glycine max Glyma.13G367300 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm13 - View
Gossypium raimondii Gorai.006G102300 Chr06 - View
Gossypium raimondii Gorai.009G126400 Chr09 + View
Gossypium raimondii Gorai.010G224000 Chr10 + View
Helianthus annuus HanXRQChr16g0500261 Putative CTLH, C-terminal LisH motif; Quinoprotein alcohol dehydrogenase-like superfamily; WD40/YVTN repeat-like-containing domain; Topless family HanXRQChr16 + View
Helianthus annuus HanXRQChr09g0274801 Putative LIS1 homology motif; CTLH, C-terminal LisH motif; Quinoprotein alcohol dehydrogenase-like superfamily; WD40/YVTN repeat-like-containing domain; Topless family HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0461F.1_g157680 Hma1.2p1_0461F.1 + View
Lupinus albus Lalb_Chr14g0373891 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Lalb_Chr14 - View
Lotus japonicus Lj3g0002424 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED chr3 - View
Lotus japonicus Lj3g0018796 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED chr3 - View
Lotus japonicus Lj4g0012168 PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 chr4 + View
Lonicera japonica Lj9A497G69 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_5_96921 PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_1_31280 Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_5_8840 Lsat_1_v8_lg_5 - View
Malus domestica MD15G1129100 TOPLESS-related 1 Chr15 - View
Malus domestica MD17G1217100 Transducin family protein / WD-40 repeat family protein Chr17 - View
Manihot esculenta Manes.16G124700 Chromosome16 - View
Manihot esculenta Manes.11G061200 Chromosome11 - View
Manihot esculenta Manes.04G108600 Chromosome04 + View
Medicago truncatula Medtr2g104140 topless-like protein chr2 - View
Medicago truncatula Medtr4g009840 topless-like protein chr4 + View
Nelumbo nucifera Nn2g12191 chr2 - View
Punica granatum PGR031G0793 NC_045127.1 + View
Punica granatum PGR102G0035 NC_045129.1 + View
Prunus persica Prupe.1G484400 Pp01 - View
Prunus persica Prupe.3G093100 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Pp03 - View
Pisum sativum Psat7g257840 WD domain + G-beta repeat chr7LG7 - View
Papaver somniferum PSO170G3163 NC_039360.1 - View
Papaver somniferum PSO210G0606 NC_039359.1 - View
Populus trichocarpa Potri.003G030000 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr03 + View
Populus trichocarpa Potri.006G257900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr06 - View
Phaseolus vulgaris Phvul.010G157700 Chr10 - View
Phaseolus vulgaris Phvul.005G180100 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr05 + View
Quercus lobata QL05p032679 5 - View
Quercus lobata QL02p020877 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0134371 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim12G0189200 chr12 + View
Striga asiatica SGA_v2.0_scaffold37G14746 scaffold37 + View
Salvia bowleyana SalBow6G3824 GWHASIU00000002 - View
Salvia bowleyana SalBow7G2029 GWHASIU00000005 + View
Salix brachista Sabra03G0016500 GWHAAZH00000003 + View
Salix brachista Sabra06G0201700 GWHAAZH00000006 - View
Sechium edule Sed0024045 LG06 + View
Sechium edule Sed0021421 LG05 + View
Solanum lycopersicum Solyc03g117360.4 TOPLESS1 SL4.0ch03 + View
Schrenkiella parvula Sp1g14040 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED ch1-1 - View
Schrenkiella parvula Sp5g35310 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED ch5-7 + View
Solanum pennellii Sopen03g036250 Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. | TOPLESS (TPL) | FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , CTLH, C-terminal LisH motif , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , LisH dimerisation motif , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: TOPLESS-related 1 Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400014137 Protein TOPLESS ST4.03ch03 + View
Selenicereus undatus Hund06544 Scaffold_33676 + View
Selenicereus undatus Hund00495 Scaffold_33678 + View
Trochodendron aralioides TAR625G0987 group4 + View
Theobroma cacao Thecc.09G020900 TOPLESS-related 1 Chromosome_9 - View
Theobroma cacao Thecc.06G033200 TOPLESS-related 1 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104812463 protein TOPLESS-like NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104808364 protein TOPLESS NW_010964598.1 + View
Tarenaya hassleriana THA.LOC104813577 protein TOPLESS-like NW_010965373.1 - View
Trifolium pratense TPR.G37293 Tp57577_TGAC_v2_LG7 + View
Trifolium pratense TPR.G38602 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI18G0724 NC_052241.1 - View
Tripterygium wilfordii TWI12G1277 NC_052243.1 + View
Utricularia gibba unitig_699.g19088 unitig_699 + View
Vaccinium macrocarpon vmacro16894 Similar to TPR4: Topless-related protein 4 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G0637 CM024078.1 + View
Vitis vinifera GSVIVG01017487001 chr9 - View