Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014570 unnamed protein product [Coffea canephora] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G7230 LG-8 - View
Acer truncatum Atru.chr2.3497 chr2 + View
Acer truncatum Atru.chr6.3232 chr6 - View
Actinidia chinensis Actinidia35365 Lachesis_group2 + View
Actinidia chinensis Actinidia10746 Lachesis_group9 + View
Actinidia chinensis Actinidia09734 Lachesis_group5 + View
Arabidopsis lyrata AL3G34140 scaffold_3 - View
Avicennia marina MSTRG.6943 ScioBoG_102840_HRSCAF_103099 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7RWM6D PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT3G20420 RNAse THREE-like protein 2 double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm. RNAse THREE-like protein 2 (RTL2)%3B FUNCTIONS IN: double-stranded RNA binding%2C ribonuclease III activity%3B INVOLVED IN: RNA processing%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159)%2C Ribonuclease III (InterPro:IPR000999)%3B BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 3 (TAIR:AT5G45150.1)%3B Has 7842 Blast hits to 7448 proteins in 2591 species: Archae - 23%3B Bacteria - 4871%3B Metazoa - 597%3B Fungi - 359%3B Plants - 331%3B Viruses - 17%3B Other Eukaryotes - 1644 (source: NCBI BLink). Chr3 - View
Brassica rapa BraA05t21727Z A05 + View
Beta vulgaris EL10Ac4g07760 PF00035//PF00636//PF14709 - Double-stranded RNA binding motif (dsrm) // Ribonuclease III domain (Ribonuclease_3) // double strand RNA binding domain from DEAD END PROTEIN 1 (DND1_DSRM) Chr4_EL10_PGA_scaffold1 + View
Capsicum annuum CAN.G492.19 PGAv.1.6.scaffold492 + View
Corylus avellana Haze_09717 Similar to RTL2: Ribonuclease 3-like protein 2 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g14090 Ribonuclease 3-like protein 2 chr5 + View
Citrus clementina Ciclev10008694m.g scaffold_1 + View
Carpinus fangiana Cfa020304 Cfa08 - View
Cardamine hirsuta CARHR049880 Ribonuclease 3-like protein 2 Chr2 - View
Cardamine hirsuta CARHR096130 Ribonuclease 3-like protein 2 Chr3 - View
Carya illinoinensis CiPaw.12G132200 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Chr12 + View
Cucumis melo MELO3C014193.2 ribonuclease 3-like protein 2 chr06 - View
Carica papaya Cpa.g.sc12.267 supercontig_12 - View
Chenopodium quinoa AUR62015826 RTL2: Ribonuclease 3-like protein 2 C_Quinoa_Scaffold_1529 - View
Capsella rubella Carub.0003s2036 PF00035//PF00636 - Double-stranded RNA binding motif (dsrm) // Ribonuclease III domain (Ribonuclease_3) scaffold_3 - View
Cucumis sativus L. CsaV3_3G004950 Ribonuclease 3-like protein chr3 - View
Davidia involucrata Dinv40784 GWHABJS00000013 - View
Davidia involucrata Dinv08739 GWHABJS00000013 + View
Durio zibethinus Duzib138G0147 NW_019167893.1 + View
Durio zibethinus Duzib213G0551 NW_019167993.1 - View
Durio zibethinus Duzib268G0976 NW_019168270.1 - View
Erigeron canadensis ECA236G0530 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA236G2771 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.F00717 Chr06 - View
Erythranthe guttata Migut.M01731 scaffold_13 - View
Eutrema salsugineum Thhalv10020929m.g PF00035//PF00636//PF14709 - Double-stranded RNA binding motif (dsrm) // Ribonuclease III domain (Ribonuclease_3) // double strand RNA binding domain from DEAD END PROTEIN 1 (DND1_DSRM) scaffold_13 + View
Fragaria x ananassa FAN25G2496 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Fvb3-1 - View
Fragaria x ananassa FAN11G3687 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Fvb3-4 - View
Fragaria x ananassa FAN25G1948 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Fvb3-1 - View
Fragaria x ananassa FAN16G0322 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Fvb3-3 + View
Fragaria x ananassa FAN09G3465 PTHR14950//PTHR14950:SF29 - HELICASE-RELATED // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria vesca FvH4_3g23250 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Fvb3 + View
Gossypium hirsutum Gohir.A04G012700 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED A04 - View
Gossypium hirsutum Gohir.D05G373200 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED D05 + View
Gossypium hirsutum Gohir.D07G192800 PTHR14950//PTHR14950:SF23//PTHR14950:SF29 - HELICASE-RELATED // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED D07 - View
Glycine max Glyma.14G021600 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Gm14 - View
Gossypium raimondii Gorai.009G441900 Chr09 + View
Gossypium raimondii Gorai.001G215700 Chr01 - View
Lupinus albus Lalb_Chr04g0248271 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Lalb_Chr04 + View
Lotus japonicus LjContig00272g0000787 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Contig00272 - View
Lonicera japonica Lj8A128T48 GWHAAZE00000008 - View
Lonicera japonica Lj1C878T5 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_93040 Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_7_114480 Lsat_1_v8_lg_7 - View
Malus domestica MD09G1111700 RNAse II-like 1 Chr09 - View
Malus domestica MD03G1196100 RNAse THREE-like protein 2 Chr03 - View
Malus domestica MD17G1102000 RNAse II-like 1 Chr17 - View
Malus domestica MD11G1212400 RNAse THREE-like protein 2 Chr11 - View
Manihot esculenta Manes.13G068400 Chromosome13 + View
Manihot esculenta Manes.15G068000 Chromosome15 - View
Nicotiana tabacum Nitab4.5_0001393g0110 Ribonuclease III domain, Double-stranded RNA-binding domain, Ribonuclease III Nitab4.5_0001393 - View
Punica granatum PGR083G1485 NC_045133.1 + View
Prunus persica Prupe.3G213200 PTHR14950//PTHR14950:SF23 - HELICASE-RELATED // SUBFAMILY NOT NAMED Pp03 + View
Prunus persica Prupe.4G219200 Pp04 + View
Papaver somniferum PSO675G6810 NC_039358.1 + View
Papaver somniferum PSO541G6031 NC_039363.1 + View
Populus trichocarpa Potri.002G226700 PTHR14950//PTHR14950:SF23 - HELICASE-RELATED // SUBFAMILY NOT NAMED Chr02 + View
Phaseolus vulgaris Phvul.008G269800 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED Chr08 + View
Quercus lobata QL08p031336 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0040931 RcHm_v2.0_Chr5 + View
Rhododendron simsii RhsimUnG0248400 ctg617 - View
Rhododendron simsii Rhsim06G0165700 chr06 - View
Salvia bowleyana SalBow8G1530 GWHASIU00000004 + View
Solanum lycopersicum Solyc12g014410.2 Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A1U8G157_CAPAN) SL4.0ch12 + View
Solanum lycopersicum Solyc10g006200.4 Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A2G3BC36_CAPCH) SL4.0ch10 - View
Schrenkiella parvula Sp3g18430 PTHR14950//PTHR14950:SF22 - HELICASE-RELATED // SUBFAMILY NOT NAMED ch3-1 - View
Solanum pennellii Sopen10g002110 hypothetical protein Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400014420 Ribonuclease III ST4.03ch10 - View
Selenicereus undatus Hund23225 Scaffold_33680 + View
Trochodendron aralioides TAR626G0927 group3 - View
Trochodendron aralioides TAR624G0323 group9 + View
Trochodendron aralioides TAR629G1869 group0 + View
Theobroma cacao Thecc.07G031400 RNAse THREE-like protein 2 Chromosome_7 - View
Trifolium pratense TPR.G1181 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI39G0857 NC_052250.1 - View
Vaccinium macrocarpon vmacro12180 Similar to Os06g0358800: Ribonuclease 3-like protein 3 (Oryza sativa subsp. japonica OX%3D39947) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro09696 Similar to RTL2: Ribonuclease 3-like protein 2 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G2567 CM024073.1 + View
Vitis vinifera GSVIVG01037698001 chr19 + View