Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0041717 PREDICTED: hydrophobic protein LTI6A-like [Glycine max] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YXU9YV PTHR21659//PTHR21659:SF24 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2A arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT3G05880 Low temperature and salt responsive protein family Induced by low temperatures%2C dehydration and salt stress and ABA. Encodes a small (54 amino acids)%2C highly hydrophobic protein that bears two potential transmembrane domains. RARE-COLD-INDUCIBLE 2A (RCI2A)%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612)%3B BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT3G05890.1)%3B Has 1394 Blast hits to 1394 proteins in 470 species: Archae - 0%3B Bacteria - 656%3B Metazoa - 39%3B Fungi - 282%3B Plants - 382%3B Viruses - 0%3B Other Eukaryotes - 35 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G57550 Low temperature and salt responsive protein family Low temperature and salt responsive protein family%3B INVOLVED IN: response to cold%2C hyperosmotic salinity response%3B LOCATED IN: endomembrane system%2C integral to membrane%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612)%3B BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT2G38905.1)%3B Has 1255 Blast hits to 1255 proteins in 454 species: Archae - 0%3B Bacteria - 648%3B Metazoa - 29%3B Fungi - 173%3B Plants - 377%3B Viruses - 0%3B Other Eukaryotes - 28 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC05g29772 ChrC05 + View
Brassica carinata BcaNung03904 Contig1360 + View
Brassica carinata BcaB07g31143 ChrB07 - View
Brassica napus A01p27650 A01 - View
Brassica napus A03p34340 A03 - View
Brassica rapa BraA01t02904Z A01 - View
Brassica rapa BraA05t22935Z A05 + View
Cicer arietinum L. Ca_09271_v3 Ca_LG3_v3 + View
Cardamine hirsuta CARHR080340 Plasma membrane protein 3-2 Chr3 - View
Citrullus lanatus ClCG02G014410 Low temperature and salt responsive protein CG_Chr02 - View
Capsella rubella Carub.0003s0525 PTHR21659//PTHR21659:SF24 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2A scaffold_3 - View
Cucumis sativus L. CsaV3_1G038070 Hydrophobic protein like chr1 - View
Cucumis sativus L. CsaV3_2G007590 UPF0057 membrane protein At4g30660 chr2 + View
Eutrema salsugineum Thhalv10021802m.g PTHR21659:SF24 - HYDROPHOBIC PROTEIN RCI2A scaffold_13 + View
Fragaria x ananassa FAN09G3592 PTHR21659:SF24 - HYDROPHOBIC PROTEIN RCI2A Fvb6-2 + View
Gossypium hirsutum Gohir.D13G184700 PTHR21659//PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2B D13 - View
Gossypium hirsutum Gohir.A13G182800 PTHR21659//PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2B A13 - View
Glycine max Glyma.19G224802 PTHR21659//PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2B Gm19 + View
Glycine max Glyma.10G142700 PTHR21659//PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2B Gm10 + View
Glycine max Glyma.20G091300 PTHR21659//PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2B Gm20 + View
Gossypium raimondii Gorai.013G210800 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0052F.1_g030350 Hma1.2p1_0052F.1 + View
Lupinus albus Lalb_Chr21g0310011 PTHR21659:SF24 - HYDROPHOBIC PROTEIN RCI2A Lalb_Chr21 + View
Lupinus albus Lalb_Chr02g0147491 PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2B Lalb_Chr02 + View
Lupinus albus Lalb_Chr06g0167271 PTHR21659//PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED // HYDROPHOBIC PROTEIN RCI2B Lalb_Chr06 + View
Lotus japonicus Lj5g0004194 PTHR21659:SF24 - HYDROPHOBIC PROTEIN RCI2A chr5 + View
Manihot esculenta Manes.08G107150 Chromosome08 + View
Nelumbo nucifera Nn4g25291 chr4 - View
Petunia axillaris Peaxi162Scf00194g00014 Hydrophobic protein LTI6A Peaxi162Scf00194 - View
Phaseolus vulgaris Phvul.007G205901 PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2B Chr07 - View
Phaseolus vulgaris Phvul.001G221700 PTHR21659:SF19 - HYDROPHOBIC PROTEIN RCI2B Chr01 + View
Solanum lycopersicum Solyc01g102290.3 Low temperature and salt responsive protein (AHRD V3.3 *** Q8H9B8_SOLTU) SL4.0ch01 - View
Solanum pennellii Sopen01g044730 hypothetical protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400018241 Low temperature and salt responsive protein ST4.03ch01 - View
Tarenaya hassleriana THA.LOC104818756 hydrophobic protein RCI2B NW_010966177.1 - View
Tarenaya hassleriana THA.LOC109117011 hydrophobic protein RCI2B-like NW_010960187.1 + View
Vigna mungo VMungo0720G1927 CM024071.1 + View